microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data.

Autor: Zuffa S; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA., Schmid R; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA., Bauermeister A; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.; Department of Pharmacology, Institute of Biomedical Sciences, University of São Paulo, São Paulo, Brazil., P Gomes PW; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA., Caraballo-Rodriguez AM; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA., El Abiead Y; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA., Aron AT; Department of Chemistry and Biochemistry, University of Denver, Denver, CO, USA., Gentry EC; Department of Chemistry, Virginia Tech, Blacksburg, VA, USA., Zemlin J; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.; Center for Microbiome Innovation, University of California San Diego, San Diego, CA, USA., Meehan MJ; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA., Avalon NE; Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA., Cichewicz RH; Department of Chemistry and Biochemistry, College of Arts and Sciences, University of Oklahoma, Norman, OK, USA., Buzun E; Department of Pathology, School of Medicine, University of California San Diego, San Diego, CA, USA., Terrazas MC; Department of Pathology, School of Medicine, University of California San Diego, San Diego, CA, USA., Hsu CY; Department of Pathology, School of Medicine, University of California San Diego, San Diego, CA, USA., Oles R; Department of Pathology, School of Medicine, University of California San Diego, San Diego, CA, USA., Ayala AV; Department of Pathology, School of Medicine, University of California San Diego, San Diego, CA, USA., Zhao J; Department of Pathology, School of Medicine, University of California San Diego, San Diego, CA, USA., Chu H; Department of Pathology, School of Medicine, University of California San Diego, San Diego, CA, USA.; Center for Mucosal Immunology, Allergy, and Vaccines (cMAV), Chiba University-University of California San Diego, San Diego, CA, USA., Kuijpers MCM; Department of Ecology, Behavior and Evolution, School of Biological Sciences, University of California San Diego, San Diego, CA, USA., Jackrel SL; Department of Ecology, Behavior and Evolution, School of Biological Sciences, University of California San Diego, San Diego, CA, USA., Tugizimana F; Department of Biochemistry, Faculty of Science, University of Johannesburg, Johannesburg, South Africa.; International Research and Development, Omnia Nutriology, Omnia Group (Pty) Ltd, Johannesburg, South Africa., Nephali LP; Department of Biochemistry, Faculty of Science, University of Johannesburg, Johannesburg, South Africa., Dubery IA; Department of Biochemistry, Faculty of Science, University of Johannesburg, Johannesburg, South Africa., Madala NE; Department of Biochemistry and Microbiology, Faculty of Sciences, Agriculture and Engineering, University of Venda, Thohoyandou, South Africa., Moreira EA; Department of BioMolecular Sciences, School of Pharmaceutical Sciences of Ribeirão Preto, University of São Paulo, Ribeirão Preto, São Paulo, Brazil., Costa-Lotufo LV; Department of Pharmacology, Institute of Biomedical Sciences, University of São Paulo, São Paulo, Brazil., Lopes NP; Department of BioMolecular Sciences, School of Pharmaceutical Sciences of Ribeirão Preto, University of São Paulo, Ribeirão Preto, São Paulo, Brazil., Rezende-Teixeira P; Department of Pharmacology, Institute of Biomedical Sciences, University of São Paulo, São Paulo, Brazil., Jimenez PC; Department of Marine Science, Institute of Marine Science, Federal University of São Paulo, Santos, Brazil., Rimal B; Department of Veterinary and Biomedical Sciences, Pennsylvania State University, University Park, PA, USA., Patterson AD; Department of Veterinary and Biomedical Sciences, Pennsylvania State University, University Park, PA, USA., Traxler MF; Plant and Microbial Biology, College of Natural Resources, University of California Berkeley, Berkeley, CA, USA., Pessotti RC; Plant and Microbial Biology, College of Natural Resources, University of California Berkeley, Berkeley, CA, USA., Alvarado-Villalobos D; Metabolomics and Chemical Profiling, Centro de Investigaciones en Productos Naturales (CIPRONA), Universidad de Costa Rica, San José, Costa Rica., Tamayo-Castillo G; Metabolomics and Chemical Profiling, Centro de Investigaciones en Productos Naturales (CIPRONA), Universidad de Costa Rica, San José, Costa Rica.; Escuela de Química, Universidad de Costa Rica, San José, Costa Rica., Chaverri P; Microbial Biotechnology, Centro de Investigaciones en Productos Naturales (CIPRONA) and Escuela de Biología, Universidad de Costa Rica, San José, Costa Rica.; Escuela de Biología, Universidad de Costa Rica, San José, Costa Rica.; Department of Natural Sciences, Bowie State University, Bowie, MD, USA., Escudero-Leyva E; Microbial Biotechnology, Centro de Investigaciones en Productos Naturales (CIPRONA), Universidad de Costa Rica, San José, Costa Rica., Quiros-Guerrero LM; School of Pharmaceutical Sciences, University of Geneva, Geneva, Switzerland.; Institute of Pharmaceutical Sciences of Western Switzerland, University of Geneva, Geneva, Switzerland., Bory AJ; School of Pharmaceutical Sciences, University of Geneva, Geneva, Switzerland.; Institute of Pharmaceutical Sciences of Western Switzerland, University of Geneva, Geneva, Switzerland., Joubert J; School of Pharmaceutical Sciences, University of Geneva, Geneva, Switzerland.; Institute of Pharmaceutical Sciences of Western Switzerland, University of Geneva, Geneva, Switzerland., Rutz A; School of Pharmaceutical Sciences, University of Geneva, Geneva, Switzerland.; Institute of Pharmaceutical Sciences of Western Switzerland, University of Geneva, Geneva, Switzerland.; Institute of Molecular Systems Biology, ETH Zurich, Zurich, Switzerland., Wolfender JL; School of Pharmaceutical Sciences, University of Geneva, Geneva, Switzerland.; Institute of Pharmaceutical Sciences of Western Switzerland, University of Geneva, Geneva, Switzerland., Allard PM; School of Pharmaceutical Sciences, University of Geneva, Geneva, Switzerland.; Institute of Pharmaceutical Sciences of Western Switzerland, University of Geneva, Geneva, Switzerland.; Department of Biology, University of Fribourg, Fribourg, Switzerland., Sichert A; Institute of Molecular Systems Biology, ETH Zurich, Zurich, Switzerland., Pontrelli S; Institute of Molecular Systems Biology, ETH Zurich, Zurich, Switzerland., Pullman BS; Department of Computer Science and Engineering, University of California San Diego, San Diego, CA, USA., Bandeira N; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.; Department of Computer Science and Engineering, University of California San Diego, San Diego, CA, USA., Gerwick WH; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA.; Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA., Gindro K; Plant Protection, Mycology group, Agroscope, Nyon, Switzerland., Massana-Codina J; Plant Protection, Mycology group, Agroscope, Nyon, Switzerland., Wagner BC; Department of Microbiology and Organismic Interactions, Interfaculty Institute of Microbiology and Infection Medicine, University of Tuebingen, Tuebingen, Germany., Forchhammer K; Department of Microbiology and Organismic Interactions, Interfaculty Institute of Microbiology and Infection Medicine, University of Tuebingen, Tuebingen, Germany., Petras D; Cluster of Excellence 'Controlling Microbes to Fight Infections' (CMFI), University of Tuebingen, Tuebingen, Germany., Aiosa N; School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, GA, USA., Garg N; School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, GA, USA.; Center for Microbial Dynamics and Infection, Georgia Institute of Technology, Atlanta, GA, USA., Liebeke M; Department of Symbiosis, Metabolic Interactions, Max Planck Institute for Marine Microbiology, Bremen, Germany.; Department for Metabolomics, Kiel University, Kiel, Germany., Bourceau P; Department of Symbiosis, Metabolic Interactions, Max Planck Institute for Marine Microbiology, Bremen, Germany., Kang KB; Research Institute of Pharmaceutical Sciences, College of Pharmacy, Sookmyung Women's University, Seoul, Korea., Gadhavi H; Mycobacterial Metabolism and Antibiotic Research Laboratory, The Francis Crick Institute, London, UK.; King's College London, London, UK., de Carvalho LPS; Mycobacterial Metabolism and Antibiotic Research Laboratory, The Francis Crick Institute, London, UK.; Chemistry Department, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation and Technology, Jupiter, FL, USA., Silva Dos Santos M; Metabolomics Science Technology Platform, The Francis Crick Institute, London, UK., Pérez-Lorente AI; Department of Microbiology, Instituto de Hortofruticultura Subtropical y Mediterránea 'La Mayora', Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Bulevar Louis Pasteur (Campus Universitario de Teatinos), Malaga, Spain., Molina-Santiago C; Department of Microbiology, Instituto de Hortofruticultura Subtropical y Mediterránea 'La Mayora', Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Bulevar Louis Pasteur (Campus Universitario de Teatinos), Malaga, Spain., Romero D; Department of Microbiology, Instituto de Hortofruticultura Subtropical y Mediterránea 'La Mayora', Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Bulevar Louis Pasteur (Campus Universitario de Teatinos), Malaga, Spain., Franke R; Department of Chemical Biology, Helmholtz Centre for Infection Research, Braunschweig, Germany., Brönstrup M; Department of Chemical Biology, Helmholtz Centre for Infection Research, Braunschweig, Germany.; German Center for Infection Research (DZIF), Site Hannover-Braunschweig, Braunschweig, Germany., Vera Ponce de León A; Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, Ås, Norway., Pope PB; Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, Ås, Norway.; Faculty of Biosciences, Norwegian University of Life Sciences, Ås, Norway., La Rosa SL; Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, Ås, Norway.; Faculty of Biosciences, Norwegian University of Life Sciences, Ås, Norway., La Barbera G; Department of Nutrition, Exercise and Sports, University of Copenhagen, Frederiksberg, Denmark., Roager HM; Department of Nutrition, Exercise and Sports, University of Copenhagen, Frederiksberg, Denmark., Laursen MF; National Food Institute, Technical University of Denmark, Lyngby, Denmark., Hammerle F; Department of Pharmacognosy, Institute of Pharmacy, University of Innsbruck, Innsbruck, Austria., Siewert B; Department of Pharmacognosy, Institute of Pharmacy, University of Innsbruck, Innsbruck, Austria., Peintner U; Department of Microbiology, University of Innsbruck, Innsbruck, Austria., Licona-Cassani C; Escuela de Ingeniería y Ciencias, Centro de Biotecnología FEMSA, Tecnologico de Monterrey, Monterrey, Mexico., Rodriguez-Orduña L; Escuela de Ingeniería y Ciencias, Centro de Biotecnología FEMSA, Tecnologico de Monterrey, Monterrey, Mexico., Rampler E; Department of Analytical Chemistry, Faculty of Chemistry, University of Vienna, Vienna, Austria., Hildebrand F; Department of Analytical Chemistry, Faculty of Chemistry, University of Vienna, Vienna, Austria.; Vienna Doctoral School in Chemistry (DoSChem), Faculty of Chemistry, University of Vienna, Vienna, Austria., Koellensperger G; Department of Analytical Chemistry, Faculty of Chemistry, University of Vienna, Vienna, Austria.; Vienna Metabolomics Center (VIME), University of Vienna, Vienna, Austria., Schoeny H; Department of Analytical Chemistry, Faculty of Chemistry, University of Vienna, Vienna, Austria., Hohenwallner K; Department of Analytical Chemistry, Faculty of Chemistry, University of Vienna, Vienna, Austria.; Vienna Doctoral School in Chemistry (DoSChem), Faculty of Chemistry, University of Vienna, Vienna, Austria., Panzenboeck L; Department of Analytical Chemistry, Faculty of Chemistry, University of Vienna, Vienna, Austria.; Vienna Doctoral School in Chemistry (DoSChem), Faculty of Chemistry, University of Vienna, Vienna, Austria., Gregor R; Department of Civil and Environmental Engineering, School of Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA., O'Neill EC; School of Chemistry, University of Nottingham, Nottingham, UK., Roxborough ET; School of Chemistry, University of Nottingham, Nottingham, UK., Odoi J; Faculty of Engineering, University of Nottingham, Nottingham, UK., Bale NJ; Department of Marine Microbiology and Biogeochemistry, Netherlands Institute for Sea Research (NIOZ), t Horntje (Texel), the Netherlands., Ding S; Department of Marine Microbiology and Biogeochemistry, Netherlands Institute for Sea Research (NIOZ), t Horntje (Texel), the Netherlands., Sinninghe Damsté JS; Department of Marine Microbiology and Biogeochemistry, Netherlands Institute for Sea Research (NIOZ), t Horntje (Texel), the Netherlands., Guan XL; Lee Kong Chian School of Medicine, Nanyang Technological University, Singapore, Singapore., Cui JJ; Department of Microbiology, College of Arts and Sciences, The Ohio State University, Columbus, OH, USA., Ju KS; Department of Microbiology, College of Arts and Sciences, The Ohio State University, Columbus, OH, USA.; Division of Medicinal Chemistry and Pharmacognosy, College of Pharmacy, The Ohio State University, Columbus, OH, USA.; Center for Applied Plant Sciences, The Ohio State University, Columbus, OH, USA.; Infectious Diseases Institute, The Ohio State University, Columbus, OH, USA., Silva DB; Faculty of Pharmaceutical Sciences, Food and Nutrition, Federal University of Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brazil., Silva FMR; Faculty of Pharmaceutical Sciences, Food and Nutrition, Federal University of Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brazil., da Silva GF; Embrapa Amazônia Ocidental, Manaus, Brazil., Koolen HHF; Escola Superior de Ciências da Saúde, Universidade do Estado do Amazonas, Manaus, Brazil., Grundmann C; Department of Pharmaceutical Sciences, School of Pharmaceutical Sciences of Ribeirão Preto, University of São Paulo, Ribeirão Preto, Brazil., Clement JA; Baruch S. Blumberg Institute, Doylestown, PA, USA., Mohimani H; Computational Biology Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA, USA., Broders K; USDA, Agricultural Research Service, National Center for Agricultural Utilization Research, Mycotoxin Prevention and Applied Microbiology Research Unit, Peoria, IL, USA., McPhail KL; Department of Pharmaceutical Sciences, College of Pharmacy, Oregon State University, Corvallis, OR, USA., Ober-Singleton SE; Department of Physics, Study of Heavy-Element-Biomaterials, University of Oregon, Eugene, OR, USA., Rath CM; Emeryville, CA, USA., McDonald D; Department of Pediatrics, University of California San Diego, San Diego, CA, USA., Knight R; Department of Computer Science and Engineering, University of California San Diego, San Diego, CA, USA.; Department of Pediatrics, University of California San Diego, San Diego, CA, USA.; Department of Bioengineering, University of California San Diego, San Diego, CA, USA., Wang M; Department of Computer Science and Engineering, University of California Riverside, Riverside, CA, USA., Dorrestein PC; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA. pdorrestein@health.ucsd.edu.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, San Diego, CA, USA. pdorrestein@health.ucsd.edu.

Publikováno v: Nature microbiology [Nat Microbiol] 2024 Feb; Vol. 9 (2), pp. 336-345. Date of Electronic Publication: 2024 Feb 05.

SARS-CoV-2 infection triggers pro-atherogenic inflammatory responses in human coronary vessels.

Autor: Eberhardt N; Department of Medicine, Division of Cardiology, NYU Cardiovascular Research Center, New York University School of Medicine, New York, NY, USA., Noval MG; Department of Microbiology, New York University School of Medicine, New York, NY, USA., Kaur R; Department of Medicine, Division of Cardiology, NYU Cardiovascular Research Center, New York University School of Medicine, New York, NY, USA., Amadori L; Department of Medicine, Division of Cardiology, NYU Cardiovascular Research Center, New York University School of Medicine, New York, NY, USA., Gildea M; Department of Medicine, Division of Cardiology, NYU Cardiovascular Research Center, New York University School of Medicine, New York, NY, USA., Sajja S; Department of Medicine, Division of Cardiology, NYU Cardiovascular Research Center, New York University School of Medicine, New York, NY, USA., Das D; Department of Medicine, Division of Cardiology, NYU Cardiovascular Research Center, New York University School of Medicine, New York, NY, USA., Cilhoroz B; Department of Medicine, Division of Cardiology, NYU Cardiovascular Research Center, New York University School of Medicine, New York, NY, USA., Stewart O; Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA., Fernandez DM; Department of Medicine, Cardiovascular Research Center, Icahn School of Medicine at Mount Sinai, New York, NY, USA., Shamailova R; Department of Medicine, Division of Cardiology, NYU Cardiovascular Research Center, New York University School of Medicine, New York, NY, USA., Guillen AV; Department of Medicine, Division of Cardiology, NYU Cardiovascular Research Center, New York University School of Medicine, New York, NY, USA., Jangra S; Department of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, USA Global Health and Emerging Pathogens Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA., Schotsaert M; Department of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, USA Global Health and Emerging Pathogens Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA., Newman JD; Department of Medicine, Division of Cardiology, NYU Cardiovascular Research Center, New York University School of Medicine, New York, NY, USA., Faries P; Department of Surgery, Vascular Division, Icahn School of Medicine at Mount Sinai, New York, NY, USA., Maldonado T; Department of Surgery, Vascular Division, New York University Langone Health, New York, NY, USA., Rockman C; Department of Surgery, Vascular Division, New York University Langone Health, New York, NY, USA., Rapkiewicz A; Department of Pathology, NYU Winthrop Hospital, Long Island School of Medicine, New York, NY, USA., Stapleford KA; Department of Microbiology, New York University School of Medicine, New York, NY, USA., Narula N; Department of Pathology, New York University School of Medicine, New York, NY, USA., Moore KJ; Department of Medicine, Division of Cardiology, NYU Cardiovascular Research Center, New York University School of Medicine, New York, NY, USA., Giannarelli C; Department of Medicine, Division of Cardiology, NYU Cardiovascular Research Center, New York University School of Medicine, New York, NY, USA.; Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.; Department of Pathology, New York University School of Medicine, New York, NY, USA.

Publikováno v: Nature cardiovascular research [Nat Cardiovasc Res] 2023 Oct; Vol. 2 (10), pp. 899-916. Date of Electronic Publication: 2023 Sep 28.

A Taxonomically-informed Mass Spectrometry Search Tool for Microbial Metabolomics Data.

Autor: Zuffa S; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Schmid R; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Bauermeister A; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States.; Department of Pharmacology, Institute of Biomedical Sciences, University of São Paulo, Av. Lineu Prestes 1524, São Paulo, SP, 05508-000, Brazil., Gomes PWP; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Caraballo-Rodriguez AM; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Abiead YE; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Aron AT; Department of Chemistry and Biochemistry, University of Denver, Denver, CO, 80210, United States., Gentry EC; Department of Chemistry, Virginia Tech, Blacksburg, VA, 24061, United States., Zemlin J; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States.; Center for Microbiome Innovation, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Meehan MJ; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Avalon NE; Scripps Institution of Oceanography, University of California San Diego, 9500 Gilman Dr., La Jolla, CA, 92093, United States., Cichewicz RH; Department of Chemistry and Biochemistry, College of Arts and Sciences, University of Oklahoma, 101 Stephenson Parkway, Norman, OK, 73019, United States., Buzun E; Department of Pathology, School of Medicine, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Terrazas MC; Department of Pathology, School of Medicine, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Hsu CY; Department of Pathology, School of Medicine, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Oles R; Department of Pathology, School of Medicine, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Ayala AV; Department of Pathology, School of Medicine, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Zhao J; Department of Pathology, School of Medicine, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Chu H; Department of Pathology, School of Medicine, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States.; Center for Mucosal Immunology, Allergy, and Vaccines (cMAV), Chiba University-University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Kuijpers MCM; Department of Ecology, Behavior and Evolution, School of Biological Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Jackrel SL; Department of Ecology, Behavior and Evolution, School of Biological Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Tugizimana F; Department of Biochemistry, Faculty of Science, University of Johannesburg, Auckland Park, Johannesburg, Gauteng, 2006, South Africa.; International Research and Development, Omnia Nutriology, Omnia Group (Pty) Ltd, 178 Montecasino Boulevard, Fourways, Johannesburg, Gauteng, 2191, South Africa., Nephali LP; Department of Biochemistry, Faculty of Science, University of Johannesburg, Auckland Park, Johannesburg, Gauteng, 2006, South Africa., Dubery IA; Department of Biochemistry, Faculty of Science, University of Johannesburg, Auckland Park, Johannesburg, Gauteng, 2006, South Africa., Madala NE; Department of Biochemistry and Microbiology, Faculty of Sciences, Agriculture and Engineering, University of Venda, Private Bag X5050, Thohoyandou, Limpopo, 950, South Africa., Moreira EA; Department of BioMolecular Sciences, School of Pharmaceutical Sciences of Ribeirão Preto, University of São Paulo, Avenida do Café, Ribeirão Preto, SP, 14040-903, Brazil., Costa-Lotufo LV; Department of Pharmacology, Institute of Biomedical Sciences, University of São Paulo, Av. Lineu Prestes 1524, São Paulo, SP, 05508-000, Brazil., Lopes NP; Department of BioMolecular Sciences, School of Pharmaceutical Sciences of Ribeirão Preto, University of São Paulo, Avenida do Café, Ribeirão Preto, SP, 14040-903, Brazil., Rezende-Teixeira P; Department of Pharmacology, Institute of Biomedical Sciences, University of São Paulo, Av. Lineu Prestes 1524, São Paulo, SP, 05508-000, Brazil., Jimenez PC; Department of Marine Science, Institute of Marine Science, Federal University of São Paulo, Rua Carvalho de Mendonça, 144, Santos, SP, 11070-100, Brazil., Rimal B; Department of Veterinary and Biomedical Sciences, Pennsylvania State University, 319 Life Sciences Building, University Park, PA, 16802, United States., Patterson AD; Department of Veterinary and Biomedical Sciences, Pennsylvania State University, 320 Life Sciences Building, University Park, PA, 16802, United States., Traxler MF; Plant and Microbial Biology, College of Natural Resources, University of California Berkeley, 311 Koshland Hall, Berkeley, CA, 94270, United States., de Cassia Pessotti R; Plant and Microbial Biology, College of Natural Resources, University of California Berkeley, 311 Koshland Hall, Berkeley, CA, 94270, United States., Alvarado-Villalobos D; Metabolomics & Chemical Profiling, Centro de Investigaciones en Productos Naturales (CIPRONA), Universidad de Costa Rica, San Pedro de Montes de Oca, San José, 2061, Costa Rica., Tamayo-Castillo G; Metabolomics & Chemical Profiling, Centro de Investigaciones en Productos Naturales (CIPRONA), Universidad de Costa Rica, San Pedro de Montes de Oca, San José, 2061, Costa Rica.; Escuela de Química, Universidad de Costa Rica, San Pedro de Montes de Oca, San José, 2061, Costa Rica., Chaverri P; Microbial Biotechnology, Centro de Investigaciones en Productos Naturales (CIPRONA) & Escuela de Biología, Universidad de Costa Rica, San Pedro de Montes de Oca, San José, 2061, Costa Rica.; Escuela de Biología, Universidad de Costa Rica, San Pedro de Montes de Oca, San José, 2061, Costa Rica.; Department of Natural Sciences, Bowie State University, Bowie, Maryland, 20715, United States., Escudero-Leyva E; Microbial Biotechnology, Centro de Investigaciones en Productos Naturales (CIPRONA), Universidad de Costa Rica, San Pedro de Montes de Oca, San José, 2061, Costa Rica., Quiros-Guerrero LM; School of Pharmaceutical Sciences, University of Geneva, Rue Michel-Servet 1, Genève, GE, 1206, Switzerland.; Institute of Pharmaceutical Sciences of Western Switzerland, University of Geneva, Rue Michel-Servet 1, Genève, GE, 1206, Switzerland., Bory AJ; School of Pharmaceutical Sciences, University of Geneva, Rue Michel-Servet 1, Genève, GE, 1206, Switzerland.; Institute of Pharmaceutical Sciences of Western Switzerland, University of Geneva, Rue Michel-Servet 1, Genève, GE, 1206, Switzerland., Joubert J; School of Pharmaceutical Sciences, University of Geneva, Rue Michel-Servet 1, Genève, GE, 1206, Switzerland.; Institute of Pharmaceutical Sciences of Western Switzerland, University of Geneva, Rue Michel-Servet 1, Genève, GE, 1206, Switzerland., Rutz A; School of Pharmaceutical Sciences, University of Geneva, Rue Michel-Servet 1, Genève, GE, 1206, Switzerland.; Institute of Pharmaceutical Sciences of Western Switzerland, University of Geneva, Rue Michel-Servet 1, Genève, GE, 1206, Switzerland.; Institute of Molecular Systems Biology, ETH Zurich, Otto-Stern-Weg 3, Zürich, 8093, Switzerland., Wolfender JL; School of Pharmaceutical Sciences, University of Geneva, Rue Michel-Servet 1, Genève, GE, 1206, Switzerland.; Institute of Pharmaceutical Sciences of Western Switzerland, University of Geneva, Rue Michel-Servet 1, Genève, GE, 1206, Switzerland., Allard PM; Department of Biology, University of Fribourg, Chemin du Musée, 10, Fribourg, FR, 1700, Switzerland.; School of Pharmaceutical Sciences, University of Geneva, Rue Michel-Servet 1, Genève, GE, 1206, Switzerland.; Institute of Pharmaceutical Sciences of Western Switzerland, University of Geneva, Rue Michel-Servet 1, Genève, GE, 1206, Switzerland., Sichert A; Institute of Molecular Systems Biology, ETH Zurich, Otto-Stern-Weg 3, Zürich, 8093, Switzerland., Pontrelli S; Institute of Molecular Systems Biology, ETH Zurich, Otto-Stern-Weg 3, Zürich, 8093, Switzerland., Pullman BS; Department of Computer Science and Engineering, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Bandeira N; Department of Computer Science and Engineering, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States.; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Gerwick WH; Scripps Institution of Oceanography, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States.; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Gindro K; Plant Protection, Mycology group, Agroscope, Rte de Duillier, 50, Nyon, VD, 1260, Switzerland., Massana-Codina J; Plant Protection, Mycology group, Agroscope, Rte de Duillier, 50, Nyon, VD, 1260, Switzerland., Wagner BC; Department of Microbiology and Organismic Interactions, Interfaculty Institute of Microbiology and Infection Medicine, University of Tuebingen, Auf der Morgenstelle 28, Tuebingen, 72076, Germany., Forchhammer K; Department of Microbiology and Organismic Interactions, Interfaculty Institute of Microbiology and Infection Medicine, University of Tuebingen, Auf der Morgenstelle 28, Tuebingen, 72076, Germany., Petras D; Cluster of Excellence 'Controlling Microbes to Fight Infections' (CMFI), University of Tuebingen, Auf der Morgenstelle 24, Tuebingen, 72076, Germany., Aiosa N; School of Chemistry and Biochemistry, Georgia Institute of Technology, 950 Atlantic Drive, Atlanta, GA, 30332, United States., Garg N; School of Chemistry and Biochemistry, Georgia Institute of Technology, 950 Atlantic Drive, Atlanta, GA, 30332, United States.; Center for Microbial Dynamics and Infection, Georgia Institute of Technology, 311 Ferst Drive, Atlanta, GA, 30332, United States., Liebeke M; Department of Symbiosis, Metabolic Interactions, Max Planck Institute for Marine Microbiology, Celsiusstrasse 1, Bremen, 28359, Germany., Bourceau P; Department of Symbiosis, Metabolic Interactions, Max Planck Institute for Marine Microbiology, Celsiusstrasse 1, Bremen, 28359, Germany., Kang KB; Research Institute of Pharmaceutical Sciences, College of Pharmacy, Sookmyung Women's University, Cheongpa-ro 47 gil 100, Seoul, 04310, Korea., Gadhavi H; Mycobacterial Metabolism and Antibiotic Research Laboratory, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK.; King's College London, Strand, London, WC2R 2LS, UK., de Carvalho LPS; Mycobacterial Metabolism and Antibiotic Research Laboratory, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK.; Chemistry Department, The Herbert Wertheim UF Scripps Institute for Biomedical Innovation & Technology, 110 Scripps Way, Jupiter, FL, 33458, United States., Dos Santos MS; Metabolomics Science Technology Platform, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK., Pérez-Lorente AI; Department of Microbiology, Instituto de Hortofruticultura Subtropical y Mediterránea ''La Mayora'', Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Bulevar Louis Pasteur (Campus Universitario de Teatinos), Málaga, Málaga, 29071, Spain., Molina-Santiago C; Department of Microbiology, Instituto de Hortofruticultura Subtropical y Mediterránea ''La Mayora'', Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Bulevar Louis Pasteur (Campus Universitario de Teatinos), Málaga, Málaga, 29071, Spain., Romero D; Department of Microbiology, Instituto de Hortofruticultura Subtropical y Mediterránea ''La Mayora'', Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Bulevar Louis Pasteur (Campus Universitario de Teatinos), Málaga, Málaga, 29071, Spain., Franke R; Department of Chemical Biology, Helmholtz Centre for Infection Research, Inhoffenstraße 7, Braunschweig, 38124, Germany., Brönstrup M; Department of Chemical Biology, Helmholtz Centre for Infection Research, Inhoffenstraße 7, Braunschweig, 38124, Germany.; German Center for Infection Research (DZIF), Site Hannover-Braunschweig, Braunschweig, 38124, Germany., de León AVP; Faculty of Chemistry, BIotechnology and Food Science, Norwegian University of Life Sciences, Postboks 5003, Ås, 1433, Norway., Pope PB; Faculty of Biosciences, Norwegian University of Life Sciences, Postboks 5003, Ås, 1433, Norway.; Faculty of Chemistry, BIotechnology and Food Science, Norwegian University of Life Sciences, Postboks 5003, Ås, 1433, Norway., Rosa SL; Faculty of Chemistry, BIotechnology and Food Science, Norwegian University of Life Sciences, Postboks 5003, Ås, 1433, Norway., Barbera G; Department of Nutrition, Exercise and Sports, University of Copenhagen, Rolighedsvej 26, Frederiksberg, 1958, Denmark., Roager HM; Department of Nutrition, Exercise and Sports, University of Copenhagen, Rolighedsvej 26, Frederiksberg, 1958, Denmark., Laursen MF; National Food Institute, Technical University of Denmark, Kemitorvet B202, Lyngby, 2800, Denmark., Hammerle F; Department of Pharmacognosy, Institute of Pharmacy, University of Innsbruck, Innrain 80-82, Innsbruck, 6020, Austria., Siewert B; Department of Pharmacognosy, Institute of Pharmacy, University of Innsbruck, Innrain 80-82, Innsbruck, 6020, Austria., Peintner U; Department of Microbiology, University of Innsbruck, Technikerstr. 25, Innsbruck, 6020, Austria., Licona-Cassani C; Escuela de Ingeniería y Ciencias, Centro de Biotecnología FEMSA, Tecnologico de Monterrey, Av. Eugenio Garza Sada 2501, Monterrey, Nuevo Leon, 64849, Mexico., Rodriguez-Orduña L; Escuela de Ingeniería y Ciencias, Centro de Biotecnología FEMSA, Tecnologico de Monterrey, Av. Eugenio Garza Sada 2501, Monterrey, Nuevo Leon, 64849, Mexico., Rampler E; Department of Analytical Chemistry, Faculty of Chemistry, University of Vienna, Waehringer Str. 38, Vienna, 1090, Austria., Hildebrand F; Department of Analytical Chemistry, Faculty of Chemistry, University of Vienna, Waehringer Str. 38, Vienna, 1090, Austria.; Vienna Doctoral School in Chemistry (DoSChem), Faculty of Chemistry, University of Vienna, Waehringer Str. 42, Vienna, 1090, Austria., Koellensperger G; Department of Analytical Chemistry, Faculty of Chemistry, University of Vienna, Waehringer Str. 38, Vienna, 1090, Austria.; Vienna Metabolomics Center (VIME), University of Vienna, Althanstr. 14,, Vienna, 1090, Austria., Schoeny H; Department of Analytical Chemistry, Faculty of Chemistry, University of Vienna, Waehringer Str. 38, Vienna, 1090, Austria., Hohenwallner K; Department of Analytical Chemistry, Faculty of Chemistry, University of Vienna, Waehringer Str. 38, Vienna, 1090, Austria.; Vienna Doctoral School in Chemistry (DoSChem), Faculty of Chemistry, University of Vienna, Waehringer Str. 42, Vienna, 1090, Austria., Panzenboeck L; Department of Analytical Chemistry, Faculty of Chemistry, University of Vienna, Waehringer Str. 38, Vienna, 1090, Austria.; Vienna Doctoral School in Chemistry (DoSChem), Faculty of Chemistry, University of Vienna, Waehringer Str. 42, Vienna, 1090, Austria., Gregor R; Department of Civil and Environmental Engineering, School of Engineering, Massachusetts Institute of Technology, 77 Massachusetts Ave, Cambridge, MA, 02142, United States., O'Neill EC; School of Chemistry, University of Nottingham, University Park, Nottingham, NG72RD, UK., Roxborough ET; School of Chemistry, University of Nottingham, University Park, Nottingham, NG72RD, UK., Odoi J; Faculty of Engineering, University of Nottingham, University Park, Nottingham, NG72RD, UK., Bale NJ; Department of Marine Microbiology and Biogeochemistry, Netherlands Institute for Sea Research (NIOZ), Landsdiep 4, t Horntje (Texel), 1797 SZ, Netherlands., Ding S; Department of Marine Microbiology and Biogeochemistry, Netherlands Institute for Sea Research (NIOZ), Landsdiep 4, t Horntje (Texel), 1797 SZ, Netherlands., Sinninghe Damsté JS; Department of Marine Microbiology and Biogeochemistry, Netherlands Institute for Sea Research (NIOZ), Landsdiep 4, t Horntje (Texel), 1797 SZ, Netherlands., Guan XL; Lee Kong Chian School of Medicine, Nanyang Technological University, 59 Nanyang Drive, Singapore, Singapore, 636921, Singapore., Cui JJ; Department of Microbiology, College of Arts and Sciences, The Ohio State University, 484 W. 12th Ave, Columbus, OH, 43210, United States., Ju KS; Department of Microbiology, College of Arts and Sciences, The Ohio State University, 484 W. 12th Ave, Columbus, OH, 43210, United States.; Division of Medicinal Chemistry and Pharmacognosy, College of Pharmacy, The Ohio State University, 484 W. 12th Ave, Columbus, OH, 43210, United States.; Center for Applied Plant Sciences, The Ohio State University, 484 W. 12th Ave, Columbus, OH, 43210, United States.; Infectious Diseases Institute, The Ohio State University, 484 W. 12th Ave, Columbus, OH, 43210, United States., Silva DB; Faculty of Pharmaceutical Sciences, Food and Nutrition, Federal University of Mato Grosso do Sul, Av. Costa e Silva, s/n, Campo Grande, MS, 79070-900, Brazil., Silva FMR; Faculty of Pharmaceutical Sciences, Food and Nutrition, Federal University of Mato Grosso do Sul, Av. Costa e Silva, s/n, Campo Grande, MS, 79070-900, Brazil., da Silva GF; Embrapa Amazônia Ocidental, AM-010 Roadway, Manaus, AM, 69010-970, Brazil., Koolen HHF; Escola Superior de Ciências da Saúde, Universidade do Estado do Amazonas, 1777 Carvalho Leal Avenue, Manaus, AM, 69065-001, Brazil., Grundmann C; Department of Pharmaceutical Sciences, School of Pharmaceutical Sciences of Ribeirão Preto, University of São Paulo, Avenida do Café, Ribeirão Preto, SP, 14040-903, Brazil., Clement JA; Baruch S. Blumberg Institute, 3805 Old Easton Rd., Doylestown, PA, 18902, United States., Mohimani H; Computational Biology Department, School of Computer Science, Carnegie Mellon University, 5000 Forbes Avenue, Pittsburgh, PA, 15213, United States., Broders K; USDA, Agricultural Research Service, National Center for Agricultural Utilization Research, Mycotoxin Prevention and Applied Microbiology Research Unit, 1815 N. University, Peoria, IL, 61604, United States., McPhail KL; Department of Pharmaceutical Sciences, College of Pharmacy, Oregon State University, Weniger Hall, room 341, Corvallis, OR, 97331, United States., Ober-Singleton SE; Department of Physics, Study of Heavy-Element-Biomaterials, University of Oregon, 1255 E 13th Ave, Basement, Eugene, OR, 97402, United States., Rath CM; 1480 64th St #300, Emeryville, CA, 94608, United States., McDonald D; Department of Pediatrics, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Knight R; Department of Pediatrics, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States.; Department of Computer Science and Engineering, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States.; Department of Bioengineering, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States., Wang M; Department of Computer Science and Engineering, University of California Riverside, 900 University Ave., Riverside, CA, 92521, United States., Dorrestein PC; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Dr., San Diego, CA, 92093, United States.

Publikováno v: Research square [Res Sq] 2023 Aug 03. Date of Electronic Publication: 2023 Aug 03.

A performance comparison of the most commonly used minimally invasive monitors of cardiac output.

Autor: Gamble JJ; Department of Anesthesia, University of Saskatchewan, Saskatoon, SK, Canada. jonathan.gamble@saskhealthauthority.ca., McKay WP; Department of Anesthesia, University of Saskatchewan, Saskatoon, SK, Canada., Ambros B; Western College of Veterinary Medicine, University of Saskatchewan, Saskatoon, SK, Canada., Miller GG; Department of Surgery, University of Saskatchewan, Saskatoon, SK, Canada., Camargo AV; Department of Academic Family Medicine, University of Saskatchewan, Saskatoon, SK, Canada., Norton J; Department of Surgery, University of Saskatchewan, Saskatoon, SK, Canada., Cowan J; Department of Anesthesia, University of Saskatchewan, Saskatoon, SK, Canada., du Rand J; Department of Surgery, University of Saskatchewan, Saskatoon, SK, Canada., McNair ED; Department of Pathology and Laboratory Medicine, University of Saskatchewan, Saskatoon, SK, Canada., Milbrandt K; Department of Surgery, University of Saskatchewan, Saskatoon, SK, Canada., Gérard M; Department of Anesthesia, University of Saskatchewan, Saskatoon, SK, Canada., Carrozzo MV; Western College of Veterinary Medicine, University of Saskatchewan, Saskatoon, SK, Canada.

Publikováno v: Canadian journal of anaesthesia = Journal canadien d'anesthesie [Can J Anaesth] 2021 Nov; Vol. 68 (11), pp. 1668-1682. Date of Electronic Publication: 2021 Aug 09.

Reply: Mechanisms of action of external volume expansion devices.

Autor: Lancerotto L; Tissue Engineering and Wound Healing Laboratory, Division of Plastic Surgery, Brigham and Women's Hospital and Harvard Medical School, Boston, Mass., Institute of Plastic Reconstructive and Aesthetic Surgery, University of Padova, Padova, Italy Division of Plastic Surgery, University of Massachusetts Medical School, Worcester, Mass. Tissue Engineering and Wound Healing Laboratory, Division of Plastic Surgery, Brigham and Women's Hospital and Harvard Medical School, Boston, Mass. Institute of Plastic Reconstructive and Aesthetic Surgery, University of Padova, Padova, Italy Back Bay Plastic Surgery, Boston, Mass. Division of Plastic Surgery, University of Massachusetts Medical School, Worcester, Mass. Tissue Engineering and Wound Healing Laboratory, Division of Plastic Surgery, Brigham and Women's Hospital and Harvard Medical School, Boston, Mass., Chin MS, Freniere B, Lujan-Hernandez JR, Li Q, Vasquez AV, Bassetto F, Del Vecchio DA, Lalikos JF, Orgill DP

Publikováno v: Plastic and reconstructive surgery [Plast Reconstr Surg] 2014 Mar; Vol. 133 (3), pp. 426e-428e.