The Endoscapes Dataset for Surgical Scene Segmentation, Object Detection, and Critical View of Safety Assessment: Official Splits and Benchmark

Autor: Murali, Aditya, Alapatt, Deepak, Mascagni, Pietro, Vardazaryan, Armine, Garcia, Alain, Okamoto, Nariaki, Costamagna, Guido, Mutter, Didier, Marescaux, Jacques, Dallemagne, Bernard, Padoy, Nicolas

This technical report provides a detailed overview of Endoscapes, a dataset of laparoscopic cholecystectomy (LC) videos with highly intricate annotations targeted at automated assessment of the Critical View of Safety (CVS). Endoscapes comprises 201

Externí odkaz: http://arxiv.org/abs/2312.12429

CholecTriplet2022: Show me a tool and tell me the triplet -- an endoscopic vision challenge for surgical action triplet detection

Autor: Nwoye, Chinedu Innocent, Yu, Tong, Sharma, Saurav, Murali, Aditya, Alapatt, Deepak, Vardazaryan, Armine, Yuan, Kun, Hajek, Jonas, Reiter, Wolfgang, Yamlahi, Amine, Smidt, Finn-Henri, Zou, Xiaoyang, Zheng, Guoyan, Oliveira, Bruno, Torres, Helena R., Kondo, Satoshi, Kasai, Satoshi, Holm, Felix, Özsoy, Ege, Gui, Shuangchun, Li, Han, Raviteja, Sista, Sathish, Rachana, Poudel, Pranav, Bhattarai, Binod, Wang, Ziheng, Rui, Guo, Schellenberg, Melanie, Vilaça, João L., Czempiel, Tobias, Wang, Zhenkun, Sheet, Debdoot, Thapa, Shrawan Kumar, Berniker, Max, Godau, Patrick, Morais, Pedro, Regmi, Sudarshan, Tran, Thuy Nuong, Fonseca, Jaime, Nölke, Jan-Hinrich, Lima, Estevão, Vazquez, Eduard, Maier-Hein, Lena, Navab, Nassir, Mascagni, Pietro, Seeliger, Barbara, Gonzalez, Cristians, Mutter, Didier, Padoy, Nicolas

Publikováno v: Medical Image Analysis, Volume 89, 2023, 102888, ISSN 1361-8415

Formalizing surgical activities as triplets of the used instruments, actions performed, and target anatomies is becoming a gold standard approach for surgical activity modeling. The benefit is that this formalization helps to obtain a more detailed u

Externí odkaz: http://arxiv.org/abs/2302.06294

Biomedical image analysis competitions: The state of current participation practice

Autor: Eisenmann, Matthias, Reinke, Annika, Weru, Vivienn, Tizabi, Minu Dietlinde, Isensee, Fabian, Adler, Tim J., Godau, Patrick, Cheplygina, Veronika, Kozubek, Michal, Ali, Sharib, Gupta, Anubha, Kybic, Jan, Noble, Alison, de Solórzano, Carlos Ortiz, Pachade, Samiksha, Petitjean, Caroline, Sage, Daniel, Wei, Donglai, Wilden, Elizabeth, Alapatt, Deepak, Andrearczyk, Vincent, Baid, Ujjwal, Bakas, Spyridon, Balu, Niranjan, Bano, Sophia, Bawa, Vivek Singh, Bernal, Jorge, Bodenstedt, Sebastian, Casella, Alessandro, Choi, Jinwook, Commowick, Olivier, Daum, Marie, Depeursinge, Adrien, Dorent, Reuben, Egger, Jan, Eichhorn, Hannah, Engelhardt, Sandy, Ganz, Melanie, Girard, Gabriel, Hansen, Lasse, Heinrich, Mattias, Heller, Nicholas, Hering, Alessa, Huaulmé, Arnaud, Kim, Hyunjeong, Landman, Bennett, Li, Hongwei Bran, Li, Jianning, Ma, Jun, Martel, Anne, Martín-Isla, Carlos, Menze, Bjoern, Nwoye, Chinedu Innocent, Oreiller, Valentin, Padoy, Nicolas, Pati, Sarthak, Payette, Kelly, Sudre, Carole, van Wijnen, Kimberlin, Vardazaryan, Armine, Vercauteren, Tom, Wagner, Martin, Wang, Chuanbo, Yap, Moi Hoon, Yu, Zeyun, Yuan, Chun, Zenk, Maximilian, Zia, Aneeq, Zimmerer, David, Bao, Rina, Choi, Chanyeol, Cohen, Andrew, Dzyubachyk, Oleh, Galdran, Adrian, Gan, Tianyuan, Guo, Tianqi, Gupta, Pradyumna, Haithami, Mahmood, Ho, Edward, Jang, Ikbeom, Li, Zhili, Luo, Zhengbo, Lux, Filip, Makrogiannis, Sokratis, Müller, Dominik, Oh, Young-tack, Pang, Subeen, Pape, Constantin, Polat, Gorkem, Reed, Charlotte Rosalie, Ryu, Kanghyun, Scherr, Tim, Thambawita, Vajira, Wang, Haoyu, Wang, Xinliang, Xu, Kele, Yeh, Hung, Yeo, Doyeob, Yuan, Yixuan, Zeng, Yan, Zhao, Xin, Abbing, Julian, Adam, Jannes, Adluru, Nagesh, Agethen, Niklas, Ahmed, Salman, Khalil, Yasmina Al, Alenyà, Mireia, Alhoniemi, Esa, An, Chengyang, Anwar, Talha, Arega, Tewodros Weldebirhan, Avisdris, Netanell, Aydogan, Dogu Baran, Bai, Yingbin, Calisto, Maria Baldeon, Basaran, Berke Doga, Beetz, Marcel, Bian, Cheng, Bian, Hao, Blansit, Kevin, Bloch, Louise, Bohnsack, Robert, Bosticardo, Sara, Breen, Jack, Brudfors, Mikael, Brüngel, Raphael, Cabezas, Mariano, Cacciola, Alberto, Chen, Zhiwei, Chen, Yucong, Chen, Daniel Tianming, Cho, Minjeong, Choi, Min-Kook, Xie, Chuantao Xie Chuantao, Cobzas, Dana, Cohen-Adad, Julien, Acero, Jorge Corral, Das, Sujit Kumar, de Oliveira, Marcela, Deng, Hanqiu, Dong, Guiming, Doorenbos, Lars, Efird, Cory, Escalera, Sergio, Fan, Di, Serj, Mehdi Fatan, Fenneteau, Alexandre, Fidon, Lucas, Filipiak, Patryk, Finzel, René, Freitas, Nuno R., Friedrich, Christoph M., Fulton, Mitchell, Gaida, Finn, Galati, Francesco, Galazis, Christoforos, Gan, Chang Hee, Gao, Zheyao, Gao, Shengbo, Gazda, Matej, Gerats, Beerend, Getty, Neil, Gibicar, Adam, Gifford, Ryan, Gohil, Sajan, Grammatikopoulou, Maria, Grzech, Daniel, Güley, Orhun, Günnemann, Timo, Guo, Chunxu, Guy, Sylvain, Ha, Heonjin, Han, Luyi, Han, Il Song, Hatamizadeh, Ali, He, Tian, Heo, Jimin, Hitziger, Sebastian, Hong, SeulGi, Hong, SeungBum, Huang, Rian, Huang, Ziyan, Huellebrand, Markus, Huschauer, Stephan, Hussain, Mustaffa, Inubushi, Tomoo, Polat, Ece Isik, Jafaritadi, Mojtaba, Jeong, SeongHun, Jian, Bailiang, Jiang, Yuanhong, Jiang, Zhifan, Jin, Yueming, Joshi, Smriti, Kadkhodamohammadi, Abdolrahim, Kamraoui, Reda Abdellah, Kang, Inha, Kang, Junghwa, Karimi, Davood, Khademi, April, Khan, Muhammad Irfan, Khan, Suleiman A., Khantwal, Rishab, Kim, Kwang-Ju, Kline, Timothy, Kondo, Satoshi, Kontio, Elina, Krenzer, Adrian, Kroviakov, Artem, Kuijf, Hugo, Kumar, Satyadwyoom, La Rosa, Francesco, Lad, Abhi, Lee, Doohee, Lee, Minho, Lena, Chiara, Li, Hao, Li, Ling, Li, Xingyu, Liao, Fuyuan, Liao, KuanLun, Oliveira, Arlindo Limede, Lin, Chaonan, Lin, Shan, Linardos, Akis, Linguraru, Marius George, Liu, Han, Liu, Tao, Liu, Di, Liu, Yanling, Lourenço-Silva, João, Lu, Jingpei, Lu, Jiangshan, Luengo, Imanol, Lund, Christina B., Luu, Huan Minh, Lv, Yi, Macar, Uzay, Maechler, Leon, L., Sina Mansour, Marshall, Kenji, Mazher, Moona, McKinley, Richard, Medela, Alfonso, Meissen, Felix, Meng, Mingyuan, Miller, Dylan, Mirjahanmardi, Seyed Hossein, Mishra, Arnab, Mitha, Samir, Mohy-ud-Din, Hassan, Mok, Tony Chi Wing, Murugesan, Gowtham Krishnan, Karthik, Enamundram Naga, Nalawade, Sahil, Nalepa, Jakub, Naser, Mohamed, Nateghi, Ramin, Naveed, Hammad, Nguyen, Quang-Minh, Quoc, Cuong Nguyen, Nichyporuk, Brennan, Oliveira, Bruno, Owen, David, Pal, Jimut Bahan, Pan, Junwen, Pan, Wentao, Pang, Winnie, Park, Bogyu, Pawar, Vivek, Pawar, Kamlesh, Peven, Michael, Philipp, Lena, Pieciak, Tomasz, Plotka, Szymon, Plutat, Marcel, Pourakpour, Fattaneh, Preložnik, Domen, Punithakumar, Kumaradevan, Qayyum, Abdul, Queirós, Sandro, Rahmim, Arman, Razavi, Salar, Ren, Jintao, Rezaei, Mina, Rico, Jonathan Adam, Rieu, ZunHyan, Rink, Markus, Roth, Johannes, Ruiz-Gonzalez, Yusely, Saeed, Numan, Saha, Anindo, Salem, Mostafa, Sanchez-Matilla, Ricardo, Schilling, Kurt, Shao, Wei, Shen, Zhiqiang, Shi, Ruize, Shi, Pengcheng, Sobotka, Daniel, Soulier, Théodore, Fadida, Bella Specktor, Stoyanov, Danail, Mun, Timothy Sum Hon, Sun, Xiaowu, Tao, Rong, Thaler, Franz, Théberge, Antoine, Thielke, Felix, Torres, Helena, Wahid, Kareem A., Wang, Jiacheng, Wang, YiFei, Wang, Wei, Wang, Xiong, Wen, Jianhui, Wen, Ning, Wodzinski, Marek, Wu, Ye, Xia, Fangfang, Xiang, Tianqi, Xiaofei, Chen, Xu, Lizhan, Xue, Tingting, Yang, Yuxuan, Yang, Lin, Yao, Kai, Yao, Huifeng, Yazdani, Amirsaeed, Yip, Michael, Yoo, Hwanseung, Yousefirizi, Fereshteh, Yu, Shunkai, Yu, Lei, Zamora, Jonathan, Zeineldin, Ramy Ashraf, Zeng, Dewen, Zhang, Jianpeng, Zhang, Bokai, Zhang, Jiapeng, Zhang, Fan, Zhang, Huahong, Zhao, Zhongchen, Zhao, Zixuan, Zhao, Jiachen, Zhao, Can, Zheng, Qingshuo, Zhi, Yuheng, Zhou, Ziqi, Zou, Baosheng, Maier-Hein, Klaus, Jäger, Paul F., Kopp-Schneider, Annette, Maier-Hein, Lena

The number of international benchmarking competitions is steadily increasing in various fields of machine learning (ML) research and practice. So far, however, little is known about the common practice as well as bottlenecks faced by the community in

Externí odkaz: http://arxiv.org/abs/2212.08568

Latent Graph Representations for Critical View of Safety Assessment

Autor: Murali, Aditya, Alapatt, Deepak, Mascagni, Pietro, Vardazaryan, Armine, Garcia, Alain, Okamoto, Nariaki, Mutter, Didier, Padoy, Nicolas

Assessing the critical view of safety in laparoscopic cholecystectomy requires accurate identification and localization of key anatomical structures, reasoning about their geometric relationships to one another, and determining the quality of their e

Externí odkaz: http://arxiv.org/abs/2212.04155

CholecTriplet2021: A benchmark challenge for surgical action triplet recognition

Autor: Nwoye, Chinedu Innocent, Alapatt, Deepak, Yu, Tong, Vardazaryan, Armine, Xia, Fangfang, Zhao, Zixuan, Xia, Tong, Jia, Fucang, Yang, Yuxuan, Wang, Hao, Yu, Derong, Zheng, Guoyan, Duan, Xiaotian, Getty, Neil, Sanchez-Matilla, Ricardo, Robu, Maria, Zhang, Li, Chen, Huabin, Wang, Jiacheng, Wang, Liansheng, Zhang, Bokai, Gerats, Beerend, Raviteja, Sista, Sathish, Rachana, Tao, Rong, Kondo, Satoshi, Pang, Winnie, Ren, Hongliang, Abbing, Julian Ronald, Sarhan, Mohammad Hasan, Bodenstedt, Sebastian, Bhasker, Nithya, Oliveira, Bruno, Torres, Helena R., Ling, Li, Gaida, Finn, Czempiel, Tobias, Vilaça, João L., Morais, Pedro, Fonseca, Jaime, Egging, Ruby Mae, Wijma, Inge Nicole, Qian, Chen, Bian, Guibin, Li, Zhen, Balasubramanian, Velmurugan, Sheet, Debdoot, Luengo, Imanol, Zhu, Yuanbo, Ding, Shuai, Aschenbrenner, Jakob-Anton, van der Kar, Nicolas Elini, Xu, Mengya, Islam, Mobarakol, Seenivasan, Lalithkumar, Jenke, Alexander, Stoyanov, Danail, Mutter, Didier, Mascagni, Pietro, Seeliger, Barbara, Gonzalez, Cristians, Padoy, Nicolas

Publikováno v: Medical Image Analysis 86 (2023) 102803

Context-aware decision support in the operating room can foster surgical safety and efficiency by leveraging real-time feedback from surgical workflow analysis. Most existing works recognize surgical activities at a coarse-grained level, such as phas

Externí odkaz: http://arxiv.org/abs/2204.04746