Bacteroides vesicles promote functional alterations in the gut microbiota composition.

Autor: Shagaleeva OY; Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia., Kashatnikova DA; Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia.; The Laboratory of Ecological Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia., Kardonsky DA; Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia., Efimov BA; Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia.; Department of Microbiology and Virology, Pirogov Russian National Research Medical University, Moscow, Russia., Ivanov VA; Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia., Smirnova SV; The Laboratory of Ecological Genetics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia., Evsiev SS; Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia., Zubkov EA; Department of Basic and Applied Neurobiology, V. P. Serbsky National Medical Research Center for Psychiatry and Narcology, Moscow, Russia., Abramova OV; Department of Basic and Applied Neurobiology, V. P. Serbsky National Medical Research Center for Psychiatry and Narcology, Moscow, Russia., Zorkina YA; Department of Basic and Applied Neurobiology, V. P. Serbsky National Medical Research Center for Psychiatry and Narcology, Moscow, Russia., Morozova AY; Department of Basic and Applied Neurobiology, V. P. Serbsky National Medical Research Center for Psychiatry and Narcology, Moscow, Russia., Vorobeva EA; Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia., Silantiev AS; Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia., Kolesnikova IV; Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia., Markelova MI; Institute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal University, Kazan, Russia., Olekhnovich EI; Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia., Morozov MD; Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia., Zoruk PY; Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia., Boldyreva DI; Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia., Kazakova VD; Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia., Vanyushkina AA; Vladimir Zelman Center for Neurobiology and Brain Rehabilitation, Skolkovo Institute of Science and Technology, Moscow, Russia., Chaplin AV; Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia.; Department of Microbiology and Virology, Pirogov Russian National Research Medical University, Moscow, Russia., Grigoryeva TV; Institute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal University, Kazan, Russia., Zakharzhevskaya NB; Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia.

Publikováno v: Microbiology spectrum [Microbiol Spectr] 2024 Nov 05; Vol. 12 (11), pp. e0063624. Date of Electronic Publication: 2024 Sep 30.

Genotyping and lipid profiling of 601 cultivated sunflower lines reveals novel genetic determinants of oil fatty acid content.

Autor: Chernova AI; Skolkovo Institute of Science and Technology (Skoltech), Bolshoy Boulevard 30, bld. 1, Moscow, 121205, Russia. alin.chernova@gmail.com.; LLC 'OIL GENE', Skolkovo Innovation Center, Moscow, Russia. alin.chernova@gmail.com., Gubaev RF; Skolkovo Institute of Science and Technology (Skoltech), Bolshoy Boulevard 30, bld. 1, Moscow, 121205, Russia.; LLC 'OIL GENE', Skolkovo Innovation Center, Moscow, Russia., Singh A; Department of Biological Sciences, University of Southern California, Los Angeles, CA, 90089, USA., Sherbina K; Department of Biological Sciences, University of Southern California, Los Angeles, CA, 90089, USA., Goryunova SV; Skolkovo Institute of Science and Technology (Skoltech), Bolshoy Boulevard 30, bld. 1, Moscow, 121205, Russia.; Vavilov Institute of General Genetics, Russian Academy of Sciences, Gubkin st. 3, Moscow, 119991, Russia.; FSBSI Lorch Potato Research Institute, Lorkha Str. 23, Kraskovo, 140051, Russia., Martynova EU; Skolkovo Institute of Science and Technology (Skoltech), Bolshoy Boulevard 30, bld. 1, Moscow, 121205, Russia., Goryunov DV; Skolkovo Institute of Science and Technology (Skoltech), Bolshoy Boulevard 30, bld. 1, Moscow, 121205, Russia.; MSU A.N. Belozersky Institute of Physico-Chemical Biology, Leninsky Gori 1, Building 40, Moscow, 119992, Russia., Boldyrev SV; Skolkovo Institute of Science and Technology (Skoltech), Bolshoy Boulevard 30, bld. 1, Moscow, 121205, Russia.; LLC 'OIL GENE', Skolkovo Innovation Center, Moscow, Russia., Vanyushkina AA; Skolkovo Institute of Science and Technology (Skoltech), Bolshoy Boulevard 30, bld. 1, Moscow, 121205, Russia., Anikanov NA; Skolkovo Institute of Science and Technology (Skoltech), Bolshoy Boulevard 30, bld. 1, Moscow, 121205, Russia., Stekolshchikova EA; Skolkovo Institute of Science and Technology (Skoltech), Bolshoy Boulevard 30, bld. 1, Moscow, 121205, Russia., Yushina EA; Skolkovo Institute of Science and Technology (Skoltech), Bolshoy Boulevard 30, bld. 1, Moscow, 121205, Russia.; FSBSI N P Bochkov Research Center of Medical Genetics, Moskvorechye St.1, Moscow, 115522, Russia., Demurin YN; Pustovoit All-Russia Research Institute of Oilseed Crops, Filatova St. 17, Krasnodar, 350038, Russia., Mukhina ZM; All-Russia Rice Research Institute, Krasnodar, 350921, Russia., Gavrilova VA; N. I. Vavilov Research Institute of Plant Genetic Resources (VIR), 42 B. Morskaja, St. Petersburg, 190000, Russia., Anisimova IN; N. I. Vavilov Research Institute of Plant Genetic Resources (VIR), 42 B. Morskaja, St. Petersburg, 190000, Russia., Karabitsina YI; N. I. Vavilov Research Institute of Plant Genetic Resources (VIR), 42 B. Morskaja, St. Petersburg, 190000, Russia., Alpatieva NV; N. I. Vavilov Research Institute of Plant Genetic Resources (VIR), 42 B. Morskaja, St. Petersburg, 190000, Russia., Chang PL; Department of Biological Sciences, University of Southern California, Los Angeles, CA, 90089, USA., Khaitovich P; Skolkovo Institute of Science and Technology (Skoltech), Bolshoy Boulevard 30, bld. 1, Moscow, 121205, Russia., Mazin PV; Skolkovo Institute of Science and Technology (Skoltech), Bolshoy Boulevard 30, bld. 1, Moscow, 121205, Russia., Nuzhdin SV; Department of Biological Sciences, University of Southern California, Los Angeles, CA, 90089, USA.

Publikováno v: BMC genomics [BMC Genomics] 2021 Jul 05; Vol. 22 (1), pp. 505. Date of Electronic Publication: 2021 Jul 05.

Outer membrane vesicles secreted by pathogenic and nonpathogenic Bacteroides fragilis represent different metabolic activities.

Autor: Zakharzhevskaya NB; Federal Research and Clinical Centre of Physical-Chemical Medicine Federal Medical Biological Agency, Malaya Pirogovskaya str., 1a, Moscow, 119435, Russian Federation. natazaha@gmail.com., Vanyushkina AA; Federal Research and Clinical Centre of Physical-Chemical Medicine Federal Medical Biological Agency, Malaya Pirogovskaya str., 1a, Moscow, 119435, Russian Federation., Altukhov IA; Moscow Institute of Physics and Technology, Institutskiy Pereulok 9, Dolgoprudny, 141700, Russian Federation., Shavarda AL; Research Resource Center Molecular and Cell Technologies, Saint-Petersburg State University, Universitetskaya nab. 7-9, Saint-Petersburg, 199034, Russian Federation.; Analytical Phytochemistry Laboratory, Komarov Botanical Institute, Prof. Popov Street 2, Saint-Petersburg, 197376, Russia., Butenko IO; Federal Research and Clinical Centre of Physical-Chemical Medicine Federal Medical Biological Agency, Malaya Pirogovskaya str., 1a, Moscow, 119435, Russian Federation., Rakitina DV; Federal Research and Clinical Centre of Physical-Chemical Medicine Federal Medical Biological Agency, Malaya Pirogovskaya str., 1a, Moscow, 119435, Russian Federation., Nikitina AS; Federal Research and Clinical Centre of Physical-Chemical Medicine Federal Medical Biological Agency, Malaya Pirogovskaya str., 1a, Moscow, 119435, Russian Federation., Manolov AI; Federal Research and Clinical Centre of Physical-Chemical Medicine Federal Medical Biological Agency, Malaya Pirogovskaya str., 1a, Moscow, 119435, Russian Federation., Egorova AN; Federal Research and Clinical Centre of Physical-Chemical Medicine Federal Medical Biological Agency, Malaya Pirogovskaya str., 1a, Moscow, 119435, Russian Federation.; Moscow Institute of Physics and Technology, Institutskiy Pereulok 9, Dolgoprudny, 141700, Russian Federation., Kulikov EE; Moscow Institute of Physics and Technology, Institutskiy Pereulok 9, Dolgoprudny, 141700, Russian Federation.; Microbial viruses laboratory, Research Center of Biotechnology RAS, Moscow, Russian Federation., Vishnyakov IE; Lab of Genome Structural Organization, Institute of Cytology, Russian Academy of Sciences, Saint Petersburg, Russia.; Institute of Nanobiotechnologies, Peter the Great St. Petersburg Polytechnic University, Saint Petersburg, Russia., Fisunov GY; Federal Research and Clinical Centre of Physical-Chemical Medicine Federal Medical Biological Agency, Malaya Pirogovskaya str., 1a, Moscow, 119435, Russian Federation., Govorun VM; Federal Research and Clinical Centre of Physical-Chemical Medicine Federal Medical Biological Agency, Malaya Pirogovskaya str., 1a, Moscow, 119435, Russian Federation.; Moscow Institute of Physics and Technology, Institutskiy Pereulok 9, Dolgoprudny, 141700, Russian Federation.; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Miklukho-Maklaya str. 16/10, Moscow 117997, Russian Federation, Moscow, Russia.

Publikováno v: Scientific reports [Sci Rep] 2017 Jul 10; Vol. 7 (1), pp. 5008. Date of Electronic Publication: 2017 Jul 10.

Microfluidic droplet platform for ultrahigh-throughput single-cell screening of biodiversity.

Autor: Terekhov SS; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russian Federation.; Department of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russian Federation., Smirnov IV; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russian Federation.; Kazan Federal University, 420008 Kazan, Russian Federation., Stepanova AV; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russian Federation., Bobik TV; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russian Federation.; Kazan Federal University, 420008 Kazan, Russian Federation., Mokrushina YA; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russian Federation., Ponomarenko NA; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russian Federation., Belogurov AA Jr; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russian Federation.; Kazan Federal University, 420008 Kazan, Russian Federation., Rubtsova MP; Department of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russian Federation.; Skolkovo Institute of Science and Technology, 143026 Skolkovo, Russian Federation., Kartseva OV; Kazan Federal University, 420008 Kazan, Russian Federation., Gomzikova MO; Kazan Federal University, 420008 Kazan, Russian Federation., Moskovtsev AA; Institute of General Pathology and Pathophysiology, 125315 Moscow, Russian Federation., Bukatin AS; St. Petersburg Academic University, 194021 St. Petersburg, Russian Federation., Dubina MV; St. Petersburg Academic University, 194021 St. Petersburg, Russian Federation., Kostryukova ES; Research and Clinical Centre of Physical-Chemical Medicine, 119435 Moscow, Russian Federation.; Moscow Institute of Physics and Technology, 141701 Dolgoprudny, Russian Federation., Babenko VV; Research and Clinical Centre of Physical-Chemical Medicine, 119435 Moscow, Russian Federation., Vakhitova MT; Moscow Institute of Physics and Technology, 141701 Dolgoprudny, Russian Federation., Manolov AI; Research and Clinical Centre of Physical-Chemical Medicine, 119435 Moscow, Russian Federation., Malakhova MV; Research and Clinical Centre of Physical-Chemical Medicine, 119435 Moscow, Russian Federation., Kornienko MA; Research and Clinical Centre of Physical-Chemical Medicine, 119435 Moscow, Russian Federation., Tyakht AV; Research and Clinical Centre of Physical-Chemical Medicine, 119435 Moscow, Russian Federation.; Moscow Institute of Physics and Technology, 141701 Dolgoprudny, Russian Federation., Vanyushkina AA; Research and Clinical Centre of Physical-Chemical Medicine, 119435 Moscow, Russian Federation., Ilina EN; Research and Clinical Centre of Physical-Chemical Medicine, 119435 Moscow, Russian Federation., Masson P; Kazan Federal University, 420008 Kazan, Russian Federation.; French Academy of Pharmacy, 75270 Paris, France., Gabibov AG; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russian Federation; gabibov@mx.ibch.ru sidney.altman@yale.edu.; Department of Chemistry, Lomonosov Moscow State University, 119991 Moscow, Russian Federation.; Kazan Federal University, 420008 Kazan, Russian Federation., Altman S; Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06520 gabibov@mx.ibch.ru sidney.altman@yale.edu.

Publikováno v: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2017 Mar 07; Vol. 114 (10), pp. 2550-2555. Date of Electronic Publication: 2017 Feb 15.

Metabolomic analysis of three Mollicute species.

Autor: Vanyushkina AA; Russian Institute of Physico-Chemical Medicine, Moscow, Russian Federation., Fisunov GY; Russian Institute of Physico-Chemical Medicine, Moscow, Russian Federation., Gorbachev AY; Russian Institute of Physico-Chemical Medicine, Moscow, Russian Federation., Kamashev DE; Russian Institute of Physico-Chemical Medicine, Moscow, Russian Federation; Russian Research Center Kurchatov Institute, Moscow, Russian Federation., Govorun VM; Russian Institute of Physico-Chemical Medicine, Moscow, Russian Federation; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, Russian Federation; Moscow Institute of Physics and Technology (State University), Dolgoprudny, Moscow Region, Russian Federation.

Publikováno v: PloS one [PLoS One] 2014 Mar 04; Vol. 9 (3), pp. e89312. Date of Electronic Publication: 2014 Mar 04 (Print Publication: 2014).