MetaNetX/MNXref - reconciliation of metabolites and biochemical reactions to bring together genome-scale metabolic networks

Autor: Marco Pagni, T. Van Du Tran, Anne Morgat, Sébastien Moretti, Olivier Martin, Alan Bridge

Publikováno v: Nucleic Acids Research, vol. 44, no. D1, pp. D523-D526
Nucleic Acids Research

MetaNetX is a repository of genome-scale metabolic networks (GSMNs) and biochemical pathways from a number of major resources imported into a common namespace of chemical compounds, reactions, cellular compartments--namely MNXref--and proteins. The M

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::29b9ac8cd142d079185835d7a0e4a3c3
https://serval.unil.ch/notice/serval:BIB_58AEB83D57CC

Prediction of super-secondary structure in α-helical and β-barrel transmembrane proteins

Autor: T. Van Du Tran, Jean-Marc Steyaert, Philippe Chassignet

Publikováno v: BMC Bioinformatics
BMC Bioinformatics, 2009, 2009 (10 (Suppl. 13)), ⟨10.1186/1471-2105-10-S13-O3⟩
BMC Bioinformatics, BioMed Central, 2009, 2009 (10 (Suppl. 13)), ⟨10.1186/1471-2105-10-S13-O3⟩

International audience; A dynamic programming algorithm is proposed to predict the structure of different families of proteins and is tested with the b-barrel transmembrane proteins.; Un algorithme est proposé qui permet, par programmation dynamique

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::477b5a693a9b729d061364c683829737
https://inria.hal.science/hal-00781437

Energy-based classification and structure prediction of transmembrane beta-barrel proteins.

Autor: Van Du Tran, Chassignet, P., Sheikh, S., Steyaert, J.-M.

Publikováno v: 2011 IEEE 1st International Conference on Computational Advances in Bio & Medical Sciences (ICCABS); 2011, p159-164, 6p