Zobrazeno 1 - 10
of 43
pro vyhledávání: '"Vamsi K, Kodali"'
Autor:
Sanjida H Rangwala, Dmitry V Rudnev, Victor V Ananiev, Dong-Ha Oh, Andrea Asztalos, Barrett Benica, Evgeny A Borodin, Nathan Bouk, Vladislav I Evgeniev, Vamsi K Kodali, Vadim Lotov, Eyal Mozes, Marina V Omelchenko, Sofya Savkina, Ekaterina Sukharnikov, Joël Virothaisakun, Terence D Murphy, Kim D Pruitt, Valerie A Schneider
Publikováno v:
PLoS Biology, Vol 22, Iss 5, p e3002405 (2024)
We report a new visualization tool for analysis of whole-genome assembly-assembly alignments, the Comparative Genome Viewer (CGV) (https://ncbi.nlm.nih.gov/genome/cgv/). CGV visualizes pairwise same-species and cross-species alignments provided by Na
Externí odkaz:
https://doaj.org/article/5f3ee861c1894e2e9be54c30e3c86d5c
Autor:
Alexia J. Taylor-Just, Mark D. Ihrie, Katherine S. Duke, Ho Young Lee, Dorothy J. You, Salik Hussain, Vamsi K. Kodali, Christina Ziemann, Otto Creutzenberg, Adriana Vulpoi, Flaviu Turcu, Monica Potara, Milica Todea, Sybille van den Brule, Dominique Lison, James C. Bonner
Publikováno v:
Particle and Fibre Toxicology, Vol 17, Iss 1, Pp 1-18 (2020)
Abstract Background Inhalation of multi-walled carbon nanotubes (MWCNTs) poses a potential risk to human health. In order to safeguard workers and consumers, the toxic properties of MWCNTs need to be identified. Functionalization has been shown to ei
Externí odkaz:
https://doaj.org/article/f5fdca8869504a2db332be4a4099eecb
Autor:
Nairrita Majumder, Murugesan Velayutham, Dimitrios Bitounis, Vamsi K. Kodali, Md Habibul Hasan Mazumder, Jessica Amedro, Valery V. Khramtsov, Aaron Erdely, Timothy Nurkiewicz, Philip Demokritou, Eric E. Kelley, Salik Hussain
Publikováno v:
Redox Biology, Vol 47, Iss , Pp 102161- (2021)
Oxidation of engineered nanomaterials during application in various industrial sectors can alter their toxicity. Oxidized nanomaterials also have widespread industrial and biomedical applications. In this study, we evaluated the cardiopulmonary hazar
Externí odkaz:
https://doaj.org/article/97b9ccd84b3f458db3b3cdd7b4dcae85
Autor:
Nairrita Majumder, William T. Goldsmith, Vamsi K. Kodali, Murugesan Velayutham, Sherri A. Friend, Valery V. Khramtsov, Timothy R. Nurkiewicz, Aaron Erdely, Patti C. Zeidler-Erdely, Vince Castranova, Jack R. Harkema, Eric E. Kelley, Salik Hussain
Publikováno v:
Redox Biology, Vol 46, Iss , Pp 102092- (2021)
Environmental inhalation exposures are inherently mixed (gases and particles), yet regulations are still based on single toxicant exposures. While the impacts of individual components of environmental pollution have received substantial attention, th
Externí odkaz:
https://doaj.org/article/d67b68911a064a68a56fca19ff20ac2f
Autor:
Jordan N. Smith, Dennis G. Thomas, Hadley Jolley, Vamsi K. Kodali, Matthew H. Littke, Prabhakaran Munusamy, Donald R. Baer, Matthew J. Gaffrey, Brian D. Thrall, Justin G. Teeguarden
Publikováno v:
Particle and Fibre Toxicology, Vol 15, Iss 1, Pp 1-12 (2018)
Abstract Background When suspended in cell culture medium, nano-objects composed of soluble metals such as silver can dissolve resulting in ion formation, altered particle properties (e.g. mass, morphology, etc.), and modulated cellular dose. Culture
Externí odkaz:
https://doaj.org/article/9cbd8b3b9c03414692becc06c677ec8f
Autor:
Joannella Morales, Shashikant Pujar, Jane E. Loveland, Alex Astashyn, Ruth Bennett, Andrew Berry, Eric Cox, Claire Davidson, Olga Ermolaeva, Catherine M. Farrell, Reham Fatima, Laurent Gil, Tamara Goldfarb, Jose M. Gonzalez, Diana Haddad, Matthew Hardy, Toby Hunt, John Jackson, Vinita S. Joardar, Michael Kay, Vamsi K. Kodali, Kelly M. McGarvey, Aoife McMahon, Jonathan M. Mudge, Daniel N. Murphy, Michael R. Murphy, Bhanu Rajput, Sanjida H. Rangwala, Lillian D. Riddick, Françoise Thibaud-Nissen, Glen Threadgold, Anjana R. Vatsan, Craig Wallin, David Webb, Paul Flicek, Ewan Birney, Kim D. Pruitt, Adam Frankish, Fiona Cunningham, Terence D. Murphy
Publikováno v:
Nature. 604:310-315
Comprehensive genome annotation is essential to understand the impact of clinically relevant variants. However, the absence of a standard for clinical reporting and browser display complicates the process of consistent interpretation and reporting. T
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d1dc0dd958a209783c4e67bd45d37986
https://doi.org/10.1038/s41586-022-04558-8
https://doi.org/10.1038/s41586-022-04558-8
Autor:
Eun Gyung Lee, Aliakbar Afshari, Walter McKinney, Vamsi K Kodali, Sherri Friend, James M Antonini, M Abbas Virji
Publikováno v:
Annals of Work Exposures and Health. 67:i77-i78
Thermal spray coating (TSC) is a surface treatment process whereby feedstock material is sprayed onto surfaces under pressure where it solidifies and forms a solid coating. In metal TSC processes, large quantities of aerosols, including fine and ultr
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::5ad1b5cb44750fabed9c67623a1eb50f
https://doi.org/10.1093/annweh/wxac087.187
https://doi.org/10.1093/annweh/wxac087.187
Autor:
Catherine M. Farrell, Tamara Goldfarb, Sanjida H. Rangwala, Alexander Astashyn, Olga D. Ermolaeva, Vichet Hem, Kenneth S. Katz, Vamsi K. Kodali, Frank Ludwig, Craig L. Wallin, Kim D. Pruitt, Terence D. Murphy
Publikováno v:
Genome Research. 32:175-188
Eukaryotic genomes contain many nongenic elements that function in gene regulation, chromosome organization, recombination, repair, or replication, and mutation of those elements can affect genome function and cause disease. Although numerous epigeno
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a145ee4dadd7c0b1e640c7fe8e84ed2b
https://doi.org/10.1101/gr.275819.121
https://doi.org/10.1101/gr.275819.121
Autor:
Hui-Hsing Hung, Yasuko Nagatsuka, Tatiana Soldà, Vamsi K. Kodali, Kazuhisa Iwabuchi, Hiroyuki Kamiguchi, Koki Kano, Ichiro Matsuo, Kazutaka Ikeda, Randal J. Kaufman, Maurizio Molinari, Peter Greimel, Yoshio Hirabayashi
Publikováno v:
Proceedings of the National Academy of Sciences. 119
Secretory proteins and lipids are biosynthesized in the endoplasmic reticulum (ER). The “protein quality control” system (PQC) monitors glycoprotein folding and supports the elimination of terminally misfolded polypeptides. A key component of the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c135da0925dfd85c16b4c246dd683982
https://doi.org/10.1073/pnas.2214957119
https://doi.org/10.1073/pnas.2214957119
Publikováno v:
Disease Models & Mechanisms, Vol 7, Iss 3, Pp 331-341 (2014)
Biosynthesis of proteins – from translation to folding to export – encompasses a complex set of events that are exquisitely regulated and scrutinized to ensure the functional quality of the end products. Cells have evolved to capitalize on multip
Externí odkaz:
https://doaj.org/article/4b945711aebd4166b65eb19727e4ed86