Výsledky vyhledávání - "Vallmer E Jordan"

Akademický článek

Alu insertion polymorphisms shared by Papio baboons and Theropithecus gelada reveal an intertwined common ancestry

Autor: Jerilyn A. Walker, Vallmer E. Jordan, Jessica M. Storer, Cody J. Steely, Paulina Gonzalez-Quiroga, Thomas O. Beckstrom, Lydia C. Rewerts, Corey P. St. Romain, Catherine E. Rockwell, Jeffrey Rogers, Clifford J. Jolly, Miriam K. Konkel, The Baboon Genome Analysis Consortium, Mark A. Batzer

Publikováno v: Mobile DNA, Vol 10, Iss 1, Pp 1-13 (2019)

Abstract Background Baboons (genus Papio) and geladas (Theropithecus gelada) are now generally recognized as close phylogenetic relatives, though morphologically quite distinct and generally classified in separate genera. Primate specific Alu retrotr

Externí odkaz: https://doaj.org/article/bf018d80300e487393a6b89ddbc09f78

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Akademický článek

A computational reconstruction of Papio phylogeny using Alu insertion polymorphisms

Autor: Vallmer E. Jordan, Jerilyn A. Walker, Thomas O. Beckstrom, Cody J. Steely, Cullen L. McDaniel, Corey P. St. Romain, The Baboon Genome Analysis Consortium, Kim C. Worley, Jane Phillips-Conroy, Clifford J. Jolly, Jeffrey Rogers, Miriam K. Konkel, Mark A. Batzer

Publikováno v: Mobile DNA, Vol 9, Iss 1, Pp 1-11 (2018)

Abstract Background Since the completion of the human genome project, the diversity of genome sequencing data produced for non-human primates has increased exponentially. Papio baboons are well-established biological models for studying human biology

Externí odkaz: https://doaj.org/article/4f6119fada934c23a6c014e565d3539c

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Sensitivity of the polyDetect computational pipeline for phylogenetic analyses

Autor: Mark A. Batzer, Jerilyn A. Walker, Vallmer E Jordan, Jessica M. Storer

Publikováno v: Analytical biochemistry. 593

Alu elements are powerful phylogenetic markers. The combination of a recently-developed computational pipeline, polyDetect, with high copy number Alu insertions has previously been utilized to help resolve the Papio baboon phylogeny with high statist

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e36c0776a0c9275a5f83bb2b900b0d36
https://pubmed.ncbi.nlm.nih.gov/31794702

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The comparative genomics and complex population history of Papio baboons

Publikováno v: Rogers, J, Raveendran, M, Alan Harris, R, Mailund, T, Leppälä, K, Athanasiadis, G, Schierup, M H, Cheng, J, Munch, K, Walker, J A, Konkel, M K, Jordan, V, Steely, C J, Beckstrom, T O, Bergey, C, Burrell, A, Schrempf, D, Noll, A, Kothe, M, Kopp, G H, Liu, Y, Murali, S, Billis, K, Martin, F J, Muffato, M, Cox, L, Else, J, Disotell, T, Muzny, D M, Phillips-Conroy, J, Aken, B, Eichler, E E, Marques-Bonet, T, Kosiol, C, Batzer, M A, Hahn, M W, Tung, J, Zinner, D, Roos, C, Jolly, C J, Gibbs, R A, Worley, K C & Baboon Genome Analysis Consortium 2019, ' The comparative genomics and complex population history of Papio baboons ', Science Advances, vol. 5, no. 1, 6947 . https://doi.org/10.1126/sciadv.aau6947
Digital.CSIC. Repositorio Institucional del CSIC
instname
Recercat: Dipósit de la Recerca de Catalunya
Varias* (Consorci de Biblioteques Universitáries de Catalunya, Centre de Serveis Científics i Acadèmics de Catalunya)
Recercat. Dipósit de la Recerca de Catalunya
Dipòsit Digital de Documents de la UAB
Universitat Autònoma de Barcelona

Recent studies suggest that closely related species can accumulate substantial genetic and phenotypic differences despite ongoing gene flow, thus challenging traditional ideas regarding the genetics of speciation. Baboons (genus Papio) are Old World

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0f473fcb1f6167156e85c195928082f2
https://pure.au.dk/portal/da/publications/the-comparative-genomics-and-complex-population-history-of-papio-baboons(90003282-a1f5-4bb2-b186-d08f8eb1c497).html

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Alu insertion polymorphisms shared by Papio baboons and Theropithecus gelada reveal an intertwined common ancestry

Autor: Cody J. Steely, Vallmer E Jordan, Paulina Gonzalez-Quiroga, Catherine E. Rockwell, Jeffrey Rogers, Miriam K. Konkel, Jessica M. Storer, Jerilyn A. Walker, Clifford J. Jolly, Mark A. Batzer, Thomas O Beckstrom, Corey P. St. Romain, Lydia C. Rewerts

Publikováno v: Mobile DNA, Vol 10, Iss 1, Pp 1-13 (2019)
Walker, J A, Jordan, V E, Storer, J M, Steely, C J, Gonzalez-Quiroga, P, Beckstrom, T O, Rewerts, L C, St. Romain, C P, Rockwell, C E, Rogers, J, Jolly, C J, Konkel, M K, The Baboon Genome Analysis Consortium & Batzer, M A 2019, ' Alu insertion polymorphisms shared by Papio baboons and Theropithecus gelada reveal an intertwined common ancestry ', Mobile DNA, vol. 10, no. 1, 46 . https://doi.org/10.1186/s13100-019-0187-y
Mobile DNA

BackgroundBaboons (genusPapio) and geladas (Theropithecus gelada) are now generally recognized as close phylogenetic relatives, though morphologically quite distinct and generally classified in separate genera. Primate specificAluretrotransposons are

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1f3abb28510fb68d4a0d93c6e12d5f8a
http://hdl.handle.net/10230/45101

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A computational reconstruction of Papio phylogeny using Alu insertion polymorphisms

Autor: Jerilyn A. Walker, Miriam K. Konkel, Vallmer E Jordan, Jeffrey Rogers, Corey P. St. Romain, Cullen L McDaniel, Jane E. Phillips-Conroy, Cody J. Steely, Thomas O Beckstrom, Clifford J. Jolly, Kim C. Worley, Mark A. Batzer

Publikováno v: Recercat. Dipósit de la Recerca de Catalunya
instname
Mobile DNA
Jordan, V E, Walker, J A, Beckstrom, T O, Steely, C J, McDaniel, C L, St Romain, C P, The Baboon Genome Analysis Consortium, Worley, K C, Phillips-Conroy, J, Jolly, C J, Rogers, J, Konkel, M K & Batzer, M A 2018, ' A computational reconstruction of Papio phylogeny using Alu insertion polymorphisms ', Mobile DNA, vol. 9, no. 1, 13 . https://doi.org/10.1186/s13100-018-0118-3
Mobile DNA, Vol 9, Iss 1, Pp 1-11 (2018)

Background Since the completion of the human genome project, the diversity of genome sequencing data produced for non-human primates has increased exponentially. Papio baboons are well-established biological models for studying human biology and evol

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::08b1fcd6770e5bb6cd55c66ccb4f6bfa
http://hdl.handle.net/10230/37205

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Sequencing, identification and mapping of primed L1 elements (SIMPLE) reveals significant variation in full length L1 elements between individuals

Autor: Vallmer E Jordan, Mark A. Batzer, Dale J. Hedges, Vincent A Streva, Prescott L. Deininger, Sara Linker

Publikováno v: BMC Genomics

Background There are over a half a million copies of L1 retroelements in the human genome which are responsible for as much as 0.5% of new human genetic diseases. Most new L1 inserts arise from young source elements that are polymorphic in the human

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::00eef781903d17ebcdb08c40c72ed1fc

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