Zobrazeno 1 - 10
of 25
pro vyhledávání: '"Valerio Orlandini"'
Publikováno v:
BMC Bioinformatics, Vol 18, Iss 1, Pp 1-5 (2017)
Abstract Background The identification of copy number variants (CNVs) is essential to study human genetic variation and to understand the genetic basis of mendelian disorders and cancers. At present, genome-wide detection of CNVs can be achieved usin
Externí odkaz:
https://doaj.org/article/1e0e46dc6cae4e22aa0dcd9380261c10
Publikováno v:
PLoS ONE, Vol 13, Iss 4, p e0194472 (2018)
The adoption of next generation sequencing based methods in cancer research allowed for the investigation of the complex genetic structure of tumor samples. In the last few years, considerable importance was given to the research of somatic variants
Externí odkaz:
https://doaj.org/article/c0ece76b3cb54baf91058c5fb179fa89
Autor:
Pui-Yan Kwok, Elio Schijlen, James W. Hicks, Katherine S. Pollard, Marie Altmanová, Alex I. Makunin, Tomaso Patarnello, Petr Velenský, Michail Rovatsos, Yulia Mostovoy, Alisha K. Holloway, Vladimir A. Trifonov, Valerio Orlandini, Yvonne Y. Y. Lai, Marco Fondi, Massimo Milan, Ivan Rehák, Renato Fani, I. G. Kichigin, Lukáš Kratochvíl, Benoit G. Bruneau, Alessio Iannucci, Claudio Ciofi, Martina Johnson Pokorná, Tim S. Jessop, Oliver A. Ryder, Walter L. Eckalbar, Angel C.Y. Mak, Abigail L. Lind, Joseph R. Mendelson
Publikováno v:
Nature ecology & evolution, vol 3, iss 8
Nature ecology & evolution
Nature Ecology and Evolution 3 (2019) 8
Nature Ecology and Evolution, 3(8), 1241-1252
Nature ecology & evolution
Nature Ecology and Evolution 3 (2019) 8
Nature Ecology and Evolution, 3(8), 1241-1252
Monitor lizards are unique among ectothermic reptiles in that they have high aerobic capacity and distinctive cardiovascular physiology resembling that of endothermic mammals. Here, we sequence the genome of the Komodo dragon Varanus komodoensis, the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3dd9768187f3dbbc526728997db02150
https://doi.org/10.1038/s41559-019-0945-8
https://doi.org/10.1038/s41559-019-0945-8
Publikováno v:
PLoS ONE
PLoS ONE, Vol 13, Iss 4, p e0194472 (2018)
PLoS ONE, Vol 13, Iss 4, p e0194472 (2018)
The adoption of next generation sequencing based methods in cancer research allowed for the investigation of the complex genetic structure of tumor samples. In the last few years, considerable importance was given to the research of somatic variants
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2621dd9bfe48b1bc5e80f4061000a0ce
http://europepmc.org/articles/PMC5886411
http://europepmc.org/articles/PMC5886411
Publikováno v:
BMC Bioinformatics
BMC Bioinformatics, Vol 18, Iss 1, Pp 1-5 (2017)
BMC Bioinformatics, Vol 18, Iss 1, Pp 1-5 (2017)
Background The identification of copy number variants (CNVs) is essential to study human genetic variation and to understand the genetic basis of mendelian disorders and cancers. At present, genome-wide detection of CNVs can be achieved using microar
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e0e5c21161d0437f4915ab38cee63ea5
http://europepmc.org/articles/PMC5490196
http://europepmc.org/articles/PMC5490196
Autor:
Alain Filloux, Angelina Lo Giudice, Renato Fani, Donatella de Pascale, Ermenegilda Parrilli, Elena Perrin, Maria Luisa Tutino, Marco Fondi, Isabel Maida, Emanuele Bosi, Valerio Orlandini
Publikováno v:
BMC genomics 18 (2017). doi:10.1186/s12864-016-3382-y
info:cnr-pdr/source/autori:Bosi, Emanuele; Fondi, Marco; Orlandini, Valerio; Perrin, Elena; Maida, Isabel; de Pascale, Donatella; Tutino, Maria Luisa; Parrilli, Ermenegilda; Lo Giudice, Angelina; Filloux, Alain; Fani, Renato/titolo:The pangenome of (Antarctic) Pseudoalteromonas bacteria: evolutionary and functional insights/doi:10.1186%2Fs12864-016-3382-y/rivista:BMC genomics/anno:2017/pagina_da:/pagina_a:/intervallo_pagine:/volume:18
BMC Genomics
info:cnr-pdr/source/autori:Bosi, Emanuele; Fondi, Marco; Orlandini, Valerio; Perrin, Elena; Maida, Isabel; de Pascale, Donatella; Tutino, Maria Luisa; Parrilli, Ermenegilda; Lo Giudice, Angelina; Filloux, Alain; Fani, Renato/titolo:The pangenome of (Antarctic) Pseudoalteromonas bacteria: evolutionary and functional insights/doi:10.1186%2Fs12864-016-3382-y/rivista:BMC genomics/anno:2017/pagina_da:/pagina_a:/intervallo_pagine:/volume:18
BMC Genomics
Background Pseudoalteromonas is a genus of ubiquitous marine bacteria used as model organisms to study the biological mechanisms involved in the adaptation to cold conditions. A remarkable feature shared by these bacteria is their ability to produce
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c5df5fad4e91414fdaaca2857eb6589c
http://hdl.handle.net/11588/672162
http://hdl.handle.net/11588/672162
Autor:
Alessandro Pietrelli, Marco Fondi, Michele Iacono, Gianluca De Bellis, Renato Fani, Fabio Fuligni, Ermanno Rizzi, Giorgio Corti, Marco Severgnini, Valerio Orlandini, Marco Galardini
Publikováno v:
Journal of Genomics
Journal of Genomics 2 (2014): 89–93. doi:10.7150/jgen.7298
info:cnr-pdr/source/autori:Fondi, Marco (a); Orlandini, Valerio (a); Corti, Giorgio(b); Severgnini, Marco(b); Galardini, Marco (a); Pietrelli, Alessandro (b); Fuligni, Fabio(b); Iacono, Michele(b); Rizzi, Ermanno(b); De Bellis, Gianluca(b); Fani, Renato(a)/titolo:Enly: Improving Draft Genomes through Reads Recycling./doi:10.7150%2Fjgen.7298/rivista:Journal of Genomics/anno:2014/pagina_da:89/pagina_a:93/intervallo_pagine:89–93/volume:2
Journal of Genomics 2 (2014): 89–93. doi:10.7150/jgen.7298
info:cnr-pdr/source/autori:Fondi, Marco (a); Orlandini, Valerio (a); Corti, Giorgio(b); Severgnini, Marco(b); Galardini, Marco (a); Pietrelli, Alessandro (b); Fuligni, Fabio(b); Iacono, Michele(b); Rizzi, Ermanno(b); De Bellis, Gianluca(b); Fani, Renato(a)/titolo:Enly: Improving Draft Genomes through Reads Recycling./doi:10.7150%2Fjgen.7298/rivista:Journal of Genomics/anno:2014/pagina_da:89/pagina_a:93/intervallo_pagine:89–93/volume:2
The reconstruction of the complete genome sequence of an organism is an important point for comparative, functional and evolutionary genomics. Nevertheless, overcoming the problems encountered while completing the sequence of an entire genome can sti
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::159af6adfaeee1f708536dfdd641a9e5
https://doi.org/10.7150/jgen.7298
https://doi.org/10.7150/jgen.7298
Autor:
Renato Fani, Maria Luisa Tutino, Maria Cristiana Papaleo, Marco Fondi, Angelina Lo Giudice, Donatella de Pascale, Ermenegilda Parrilli, Elena Perrin, Gianluca Bartolucci, Luigi Michaud, Valerio Orlandini, Riccardo Romoli, Giovanni Emiliani, Isabel Maida
Publikováno v:
Extremophiles (Tokyo, Print) 18 (2014): 35–49. doi:10.1007/s00792-013-0590-0
info:cnr-pdr/source/autori:Maida I, Fondi M, Papaleo MC, Perrin E, Orlandini V, Emiliani G, de Pascale D, Parrilli E, Tutino ML, Michaud L, Lo Giudice A, Romoli R, Bartolucci G, Fani R./titolo:Phenotypic and genomic characterization of the Antarctic bacterium Gillisia sp. CAL575, a producer of antimicrobial compounds./doi:10.1007%2Fs00792-013-0590-0/rivista:Extremophiles (Tokyo, Print)/anno:2014/pagina_da:35/pagina_a:49/intervallo_pagine:35–49/volume:18
info:cnr-pdr/source/autori:Maida I., Fondi M., Papaleo M.C., Perrin E., Orlandini V., Emiliani G., de Pascale D., Parrilli E., Tutino M.L., Michaud L., Lo Giudice A., Romoli R., Bartolucci G., Fani R./titolo:Phenotypic and genomic characterization of the Antarctic bacterium Gillisia sp. CAL575, a producer of antimicrobial compounds/doi:10.1007%2Fs00792-013-0590-0/rivista:Extremophiles (Tokyo, Print)/anno:2014/pagina_da:35/pagina_a:49/intervallo_pagine:35–49/volume:18
info:cnr-pdr/source/autori:Maida I, Fondi M, Papaleo MC, Perrin E, Orlandini V, Emiliani G, de Pascale D, Parrilli E, Tutino ML, Michaud L, Lo Giudice A, Romoli R, Bartolucci G, Fani R./titolo:Phenotypic and genomic characterization of the Antarctic bacterium Gillisia sp. CAL575, a producer of antimicrobial compounds./doi:10.1007%2Fs00792-013-0590-0/rivista:Extremophiles (Tokyo, Print)/anno:2014/pagina_da:35/pagina_a:49/intervallo_pagine:35–49/volume:18
info:cnr-pdr/source/autori:Maida I., Fondi M., Papaleo M.C., Perrin E., Orlandini V., Emiliani G., de Pascale D., Parrilli E., Tutino M.L., Michaud L., Lo Giudice A., Romoli R., Bartolucci G., Fani R./titolo:Phenotypic and genomic characterization of the Antarctic bacterium Gillisia sp. CAL575, a producer of antimicrobial compounds/doi:10.1007%2Fs00792-013-0590-0/rivista:Extremophiles (Tokyo, Print)/anno:2014/pagina_da:35/pagina_a:49/intervallo_pagine:35–49/volume:18
Microorganisms from Antarctica have evolved particular strategies to cope with cold. Moreover, they have been recently reported as producers of antimicrobial compounds, which inhibit the growth of other bacteria. In this work we characterized from di
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e9b21290c2bc0273ec70a481496f10d6
https://doi.org/10.1007/s00792-013-0590-0
https://doi.org/10.1007/s00792-013-0590-0
Autor:
Antonio Percesepe, Luisa Murer, Stefano Stagi, Cristina Malaventura, Silvana Penco, Elena Andreucci, Rosangela Artuso, Valerio Orlandini, Sabrina Giglio, Maria Rosa Caruso, Giovanna Traficante, Aldesia Provenzano, Mario Giordano, Francesco Emma, Emanuela Manfredini, Enrico Grosso, Rosa Maria Roperto, Livia Garavelli, Laura Giunti, Marco Materassi, Marilena Pantaleo, Elisa Benetti, Giacomo Colussi, Sara Bargiacchi, Nunzia Miglietti, Simeone Andrulli, Viviana Palazzo, Benedetta Mazzinghi, Francesca Rivieri, Francesca Becherucci, Elena Mancini, Giulia Sansavini, Gianluca Vergine, Paola Romagnani
Publikováno v:
Kidney international. 91(5)
Primary distal renal tubular acidosis is a rare genetic disease. Mutations in SLC4A1 , ATP6V0A4, and ATP6V1B1 genes have been described as the cause of the disease, transmitted as either an autosomal dominant or recessive trait. Particular clinical f
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8cd17abc8122173fc50183250391435e
https://pubmed.ncbi.nlm.nih.gov/28233610
https://pubmed.ncbi.nlm.nih.gov/28233610
Autor:
Valerio Orlandini, Emanuele Bosi, Fabio Fava, Marco Fondi, Isabel Maida, Elena Perrin, Mario Vaneechoutte, Laura La Torre, Carlo Viti, Lenie Dijkshoorn, Luciana Giovannetti, Giulio Zanaroli, Francesca Decorosi, Andrea Negroni, Renato Fani
Publikováno v:
Scientific Reports
SCIENTIFIC REPORTS
SCIENTIFIC REPORTS
Crude oil is a complex mixture of hydrocarbons and other organic compounds that can produce serious environmental problems and whose removal is highly demanding in terms of human and technological resources. The potential use of microbes as bioremedi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6fdd8e52a3890a379be185f869ae92ab
http://hdl.handle.net/11585/562743
http://hdl.handle.net/11585/562743