Zobrazeno 1 - 10
of 24
pro vyhledávání: '"Valentin Zulkower"'
Autor:
Joan Hérisson, Thomas Duigou, Melchior du Lac, Kenza Bazi-Kabbaj, Mahnaz Sabeti Azad, Gizem Buldum, Olivier Telle, Yorgo El Moubayed, Pablo Carbonell, Neil Swainston, Valentin Zulkower, Manish Kushwaha, Geoff S. Baldwin, Jean-Loup Faulon
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-12 (2022)
Automated design and build processes can rapidly accelerate work in synthetic biology and metabolic engineering. Here the authors present Galaxy-SynBioCAD, a toolshed for synthetic biology, metabolic engineering, and industrial biotechnology that the
Externí odkaz:
https://doaj.org/article/259f20f7ae934c51a814e6d509a6ea80
Autor:
Joan Hérisson, Thomas Duigou, Melchior du Lac, Kenza Bazi-Kabbaj, Mahnaz Sabeti Azad, Gizem Buldum, Olivier Telle, Yorgo El-Moubayed, Pablo Carbonell, Neil Swainston, Valentin Zulkower, Manish Kushwaha, Geoff S. Baldwin, Jean-Loup Faulon
We introduce the Galaxy-SynBioCAD portal, the first toolshed for synthetic biology, metabolic engineering, and industrial biotechnology. The tools and workflows currently shared on the portal enables one to build libraries of strains producing desire
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ce2759070cb973e5ce39569182b4c0ee
https://doi.org/10.1101/2022.02.23.481618
https://doi.org/10.1101/2022.02.23.481618
Publikováno v:
Synthetic Biology
Gaeta, A, Zulkower, V & Stracquadanio, G 2021, ' Design and assembly of DNA molecules using multi-objective optimization ', Synthetic Biology, vol. 6, no. 1, ysab026 . https://doi.org/10.1093/synbio/ysab026
Gaeta, A, Zulkower, V & Stracquadanio, G 2021, ' Design and assembly of DNA molecules using multi-objective optimization ', Synthetic Biology, vol. 6, no. 1, ysab026 . https://doi.org/10.1093/synbio/ysab026
Rapid engineering of biological systems is currently hindered by limited integration of manufacturing constraints into the design process, ultimately reducing the yield of many synthetic biology workflows. Here we tackle DNA engineering as a multi-ob
Autor:
Anton Puzorjov, Alejandra A. Schiavon, Valentin Zulkower, Bo Wang, Alistair J. McCormick, Christopher J. Howe, Konstantinos Vavitsas, Michael D. Gillespie, Ravendran Vasudevan, John Malin, David J. Lea-Smith, Grant A. R. Gale
Publikováno v:
Vasudevan, R, Gale, G, Schiavon osorio, A A, Puzorjov, A, Malin, J, Gillespie, M D, Vavitsas, K, Zulkower, V, Wang, B, Howe, C J, Lea-Smith, D J & McCormick, A 2019, ' CyanoGate : A modular cloning suite for engineering cyanobacteria based on the plant MoClo syntax ', Plant physiology, vol. 180, no. 1, pp. 39-55 . https://doi.org/10.1104/pp.18.01401
Plant Physiol
Plant Physiol
Recent advances in synthetic biology research have been underpinned by an exponential increase in available genomic information and a proliferation of advanced DNA assembly tools. The adoption of plasmid vector assembly standards and parts libraries
Autor:
Valentin, Zulkower
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 2229
Type-2S restriction enzymes allow the routine assembly of large batches of synthetic constructs from individual genetic parts. However, design flaws in the part sequence can cause assembly failures, incurring troubleshooting costs and project delays.
Autor:
Valentin, Zulkower
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 2229
Restriction digest analysis and Sanger sequencing are among the most commonly used techniques to check the sequence of synthetic DNA constructs. However, both require careful preparation to select restriction enzymes or DNA primers adapted to the exp
Autor:
Valentin Zulkower
Publikováno v:
Methods in Molecular Biology ISBN: 9781071610312
Type-2S restriction enzymes allow the routine assembly of large batches of synthetic constructs from individual genetic parts. However, design flaws in the part sequence can cause assembly failures, incurring troubleshooting costs and project delays.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::64bf11d94b0d43631fed5c50405bc222
https://doi.org/10.1007/978-1-0716-1032-9_6
https://doi.org/10.1007/978-1-0716-1032-9_6
Autor:
Valentin Zulkower
Publikováno v:
Methods in Molecular Biology ISBN: 9781071610312
Restriction digest analysis and Sanger sequencing are among the most commonly used techniques to check the sequence of synthetic DNA constructs. However, both require careful preparation to select restriction enzymes or DNA primers adapted to the exp
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::4c0324bf7faa2644e3e65ccde93f1980
https://doi.org/10.1007/978-1-0716-1032-9_7
https://doi.org/10.1007/978-1-0716-1032-9_7
Autor:
Valentin Zulkower, Chueh Loo Poh, Gopal Peddinti, Maciej B. Holowko, Neil Swainston, Peter Vegh, Pablo Carbonell, Jing Wui Yeoh
Publikováno v:
Yeoh, J W, Swainston, N, Vegh, P, Zulkower, V, Carbonell, P, Holowko, M B, Peddinti, G & Poh, C L 2021, ' SynBiopython : An open-source software library for Synthetic Biology ', Synthetic Biology, vol. 6, no. 1, ysab001 . https://doi.org/10.1093/synbio/ysab001
Synthetic Biology
Synthetic Biology
Advances in hardware automation in synthetic biology laboratories are not yet fully matched by those of their software counterparts. Such automated laboratories, now commonly called biofoundries, require software solutions that would help with many s
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4ba77e632bbfff5ec48808b42e66ba9c
https://cris.vtt.fi/en/publications/251b0b11-5e01-44aa-8f31-bc8ae8fa4f76
https://cris.vtt.fi/en/publications/251b0b11-5e01-44aa-8f31-bc8ae8fa4f76
Publikováno v:
Methods in Molecular Biology ISBN: 9781071608210
Synthetic biology aims at engineering biological systems, ranging from genes to entire genomes. The emerging field of synthetic genomics provides new tools to address questions and tackle challenges in biology and biotechnology impossible to address
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::0512e45f2aa7a4005d7bfa429f91473a
https://doi.org/10.1007/978-1-0716-0822-7_13
https://doi.org/10.1007/978-1-0716-0822-7_13