An interlaboratory proficiency test using metagenomic sequencing as a diagnostic tool for the detection of RNA viruses in swine fecal material.

Autor: Liu L; Department of Microbiology, Swedish Veterinary Agency, Uppsala, Sweden., Hakhverdyan M; Department of Microbiology, Swedish Veterinary Agency, Uppsala, Sweden., Wallgren P; Department of Animal Health and Antimicrobial Strategies, Swedish Veterinary Agency, Uppsala, Sweden., Vanneste K; Department of Transversal activities in Applied Genomics, Sciensano, Brussels, Belgium., Fu Q; Department of Transversal activities in Applied Genomics, Sciensano, Brussels, Belgium., Lucas P; Ploufragan-Plouzané-Niort Laboratory, French Agency for Food, Environmental and Occupational Health Safety, Ploufragan, France., Blanchard Y; Ploufragan-Plouzané-Niort Laboratory, French Agency for Food, Environmental and Occupational Health Safety, Ploufragan, France., de Graaf M; Department of Viroscience, Erasmus University Medical Center, Rotterdam, the Netherlands., Oude Munnink BB; Department of Viroscience, Erasmus University Medical Center, Rotterdam, the Netherlands., van Boheemen S; Department of Viroscience, Erasmus University Medical Center, Rotterdam, the Netherlands., Bossers A; Department of Epidemiology, Bioinformatics and Animal models, Wageningen BioVeterinary Research, Wageningen University & Research, Lelystad, the Netherlands., Hulst M; Department of Epidemiology, Bioinformatics and Animal models, Wageningen BioVeterinary Research, Wageningen University & Research, Lelystad, the Netherlands., Van Borm S; Department of Avian Virology and Immunology, Sciensano, Ukkel, Belgium.

Publikováno v: Microbiology spectrum [Microbiol Spectr] 2024 Oct 03; Vol. 12 (10), pp. e0420823. Date of Electronic Publication: 2024 Aug 20.

A rockslide-generated tsunami in a Greenland fjord rang Earth for 9 days.

Autor: Svennevig K; Geological Survey of Denmark and Greenland, Copenhagen, Denmark., Hicks SP; Department of Earth Sciences, University College London, London, UK., Forbriger T; Geophysical Institute, Karlsruhe Institute of Technology (KIT), Karlsruhe, Germany., Lecocq T; Seismology - Gravimetry, Royal Observatory of Belgium, Brussels, Belgium., Widmer-Schnidrig R; Institute of Geodesy, University of Stuttgart, Stuttgart, Germany., Mangeney A; Université Paris Cité, Institut de Physique du Globe de Paris, CNRS, Paris, France., Hibert C; Institut Terre et Environnement de Strasbourg (ITES), CNRS UMR 7063, Université de Strasbourg, Strasbourg, France., Korsgaard NJ; Geological Survey of Denmark and Greenland, Copenhagen, Denmark., Lucas A; Université Paris Cité, Institut de Physique du Globe de Paris, CNRS, Paris, France., Satriano C; Université Paris Cité, Institut de Physique du Globe de Paris, CNRS, Paris, France., Anthony RE; U.S. Geological Survey, Albuquerque, NM, USA., Mordret A; Geological Survey of Denmark and Greenland, Copenhagen, Denmark.; Univ. Grenoble Alpes, Univ. Savoie Mont Blanc, CNRS, IRD, Univ. Gustave Eiffel, ISTerre, Grenoble, France., Schippkus S; Institute of Geophysics, Centre for Earth System Research and Sustainability (CEN), Universität Hamburg, Hamburg, Germany., Rysgaard S; Department of Biology, Arctic Research Centre, Aarhus University, Aarhus, Denmark., Boone W; Flanders Marine Institute, Oostende, Belgium., Gibbons SJ; Norges Geotekniske Institutt, Oslo, Norway., Cook KL; Univ. Grenoble Alpes, Univ. Savoie Mont Blanc, CNRS, IRD, Univ. Gustave Eiffel, ISTerre, Grenoble, France., Glimsdal S; Norges Geotekniske Institutt, Oslo, Norway., Løvholt F; Norges Geotekniske Institutt, Oslo, Norway., Van Noten K; Seismology - Gravimetry, Royal Observatory of Belgium, Brussels, Belgium., Assink JD; Royal Netherlands Meteorological Institute (KNMI), De Bilt, Netherlands., Marboeuf A; Université Paris Cité, Institut de Physique du Globe de Paris, CNRS, Paris, France., Lomax A; ALomax Scientific, Mouans Sartoux, France., Vanneste K; Seismology - Gravimetry, Royal Observatory of Belgium, Brussels, Belgium., Taira T; Berkeley Seismological Laboratory, University of California Berkeley, Berkeley, CA, USA., Spagnolo M; School of Geosciences, University of Aberdeen, Aberdeen, UK., De Plaen R; Seismology - Gravimetry, Royal Observatory of Belgium, Brussels, Belgium., Koelemeijer P; Department of Earth Sciences, University of Oxford, Oxford, UK., Ebeling C; Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA., Cannata A; Università di Catania, Dipartimento di Scienze Biologiche, Geologiche e Ambientali - Sezione di Scienze della Terra, Catania, Italy.; Istituto Nazionale di Geofisica e Vulcanologia, Osservatorio Etneo - Sezione di Catania, Catania, Italy., Harcourt WD; School of Geosciences, University of Aberdeen, Aberdeen, UK., Cornwell DG; School of Geosciences, University of Aberdeen, Aberdeen, UK., Caudron C; Université Libre de Bruxelles, Brussels, Belgium.; Wel Research Institute, Wavre, Belgium., Poli P; University of Padova, Padua, Italy., Bernard P; Université Paris Cité, Institut de Physique du Globe de Paris, CNRS, Paris, France., Larose E; Univ. Grenoble Alpes, Univ. Savoie Mont Blanc, CNRS, IRD, Univ. Gustave Eiffel, ISTerre, Grenoble, France., Stutzmann E; Université Paris Cité, Institut de Physique du Globe de Paris, CNRS, Paris, France., Voss PH; Geological Survey of Denmark and Greenland, Copenhagen, Denmark., Lund B; Department of Earth Sciences, Uppsala University, Sweden., Cannavo F; Istituto Nazionale di Geofisica e Vulcanologia, Osservatorio Etneo - Sezione di Catania, Catania, Italy., Castro-Díaz MJ; University of Málaga, Málaga, Spain., Chaves E; Volcanological and Seismological Observatory of Costa Rica, OVSICORI-UNA, Heredia, Costa Rica., Dahl-Jensen T; Geological Survey of Denmark and Greenland, Copenhagen, Denmark., Pinho Dias N; Université Paris Cité, Institut de Physique du Globe de Paris, CNRS, Paris, France., Déprez A; Data-Terra / Theia, CNRS UAR 2013, Strasbourg, France., Develter R; Flanders Marine Institute, Oostende, Belgium., Dreger D; Berkeley Seismological Laboratory, University of California Berkeley, Berkeley, CA, USA., Evers LG; Royal Netherlands Meteorological Institute (KNMI), De Bilt, Netherlands.; Delft University of Technology, Delft, Netherlands., Fernández-Nieto ED; University of Seville, Seville, Spain., Ferreira AMG; Department of Earth Sciences, University College London, London, UK., Funning G; University of California, Riverside, Riverside, CA, USA., Gabriel AA; Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.; Ludwig-Maximilians-Universität München, Munich, Germany., Hendrickx M; Seismology - Gravimetry, Royal Observatory of Belgium, Brussels, Belgium., Kafka AL; Weston Observatory, Boston College, Weston, MA, USA., Keiding M; Geological Survey of Denmark and Greenland, Copenhagen, Denmark., Kerby J; Department of Biology, Arctic Research Centre, Aarhus University, Aarhus, Denmark.; Scott Polar Research Institute, Department of Geography, University of Cambridge, Cambridge, UK., Khan SA; DTU Space, Technical University of Denmark, Kongens Lyngby, Denmark., Dideriksen AK; Department of Biology, Arctic Research Centre, Aarhus University, Aarhus, Denmark., Lamb OD; GNS Science | Te Pū Ao, Wairakei Research Centre, Taupō, New Zealand., Larsen TB; Geological Survey of Denmark and Greenland, Copenhagen, Denmark., Lipovsky B; University of Washington, Seattle, WA, USA., Magdalena I; Institut Teknologi Bandung, Bandung, Indonesia., Malet JP; Institut Terre et Environnement de Strasbourg (ITES), CNRS UMR 7063, Université de Strasbourg, Strasbourg, France.; Data-Terra / ForM@Ter, CNRS UAR 2013, Strasbourg, France., Myrup M; Greenland National Museum and Archives, Nuuk, Greenland., Rivera L; Institut Terre et Environnement de Strasbourg (ITES), CNRS UMR 7063, Université de Strasbourg, Strasbourg, France., Ruiz-Castillo E; Department of Biology, Arctic Research Centre, Aarhus University, Aarhus, Denmark., Wetter S; Université Paris Cité, Institut de Physique du Globe de Paris, CNRS, Paris, France., Wirtz B; Institut Terre et Environnement de Strasbourg (ITES), CNRS UMR 7063, Université de Strasbourg, Strasbourg, France.

Publikováno v: Science (New York, N.Y.) [Science] 2024 Sep 13; Vol. 385 (6714), pp. 1196-1205. Date of Electronic Publication: 2024 Sep 12.

Phage-Mediated Digestive Decolonization in a Gut-On-A-Chip Model: A Tale of Gut-Specific Bacterial Prosperity.

Autor: Van Nieuwenhuyse B; Institute of Experimental and Clinical Research, Pediatric Department (IREC/PEDI), Université Catholique de Louvain-UCLouvain, 1200 Brussels, Belgium., Merabishvili M; Laboratory for Molecular and Cellular Technology, Queen Astrid Military Hospital, 1120 Brussels, Belgium., Goeders N; Transversal Activities in Applied Genomics, Sciensano, Juliette Wytsmanstraat 14, 1050 Brussels, Belgium., Vanneste K; Transversal Activities in Applied Genomics, Sciensano, Juliette Wytsmanstraat 14, 1050 Brussels, Belgium., Bogaerts B; Transversal Activities in Applied Genomics, Sciensano, Juliette Wytsmanstraat 14, 1050 Brussels, Belgium., de Jode M; Bacterial Diseases, Sciensano, Juliette Wytsmanstraat 14, 1050 Brussels, Belgium., Ravau J; Institute of Experimental and Clinical Research, Pediatric Department (IREC/PEDI), Université Catholique de Louvain-UCLouvain, 1200 Brussels, Belgium., Wagemans J; Laboratory of Gene Technology, KU Leuven, 3000 Leuven, Belgium., Belkhir L; Division of Internal Medicine and Infectious Disease, Cliniques Universitaires Saint-Luc, Université Catholique de Louvain-UCLouvain, 1200 Brussels, Belgium.; Louvain Centre for Toxicology and Applied Pharmacology, Institute of Experimental and Clinical Research (IREC/LTAP), Université Catholique de Louvain-UCLouvain, 1200 Brussels, Belgium., Van der Linden D; Institute of Experimental and Clinical Research, Pediatric Department (IREC/PEDI), Université Catholique de Louvain-UCLouvain, 1200 Brussels, Belgium.; Pediatric Infectious Diseases, General Pediatrics Department, Cliniques Universitaires Saint-Luc, Université Catholique de Louvain-UCLouvain, 1200 Brussels, Belgium.

Publikováno v: Viruses [Viruses] 2024 Jun 28; Vol. 16 (7). Date of Electronic Publication: 2024 Jun 28.

Towards facilitated interpretation of shotgun metagenomics long-read sequencing data analyzed with KMA for the detection of bacterial pathogens and their antimicrobial resistance genes.

Autor: Gand M; Transversal Activities in Applied Genomics, Sciensano, Brussels, Belgium., Navickaite I; Department of Bacteriology, Animal and Plant Health Agency, Weybridge, United Kingdom., Bartsch LJ; Department of Biological Safety, German Federal Institute for Risk Assessment, Berlin, Germany., Grützke J; Department of Biological Safety, German Federal Institute for Risk Assessment, Berlin, Germany., Overballe-Petersen S; Bacterial Reference Center, Statens Serum Institute, Copenhagen, Denmark., Rasmussen A; Bacterial Reference Center, Statens Serum Institute, Copenhagen, Denmark., Otani S; National Food Institute, Technical University of Denmark, Kongens Lyngby, Denmark., Michelacci V; Department of Food Safety, Nutrition and Veterinary Public Health, Istituto Superiore di Sanità, Rome, Italy., Matamoros BR; Department of Animal Health, Complutense University of Madrid, Madrid, Spain., González-Zorn B; Department of Animal Health, Complutense University of Madrid, Madrid, Spain., Brouwer MSM; Wageningen Bioveterinary Research Part of Wageningen University and Research, Lelystad, Netherlands., Di Marcantonio L; Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise 'G. Caporale', Teramo, Italy., Bloemen B; Transversal Activities in Applied Genomics, Sciensano, Brussels, Belgium., Vanneste K; Transversal Activities in Applied Genomics, Sciensano, Brussels, Belgium., Roosens NHCJ; Transversal Activities in Applied Genomics, Sciensano, Brussels, Belgium., AbuOun M; Department of Bacteriology, Animal and Plant Health Agency, Weybridge, United Kingdom., De Keersmaecker SCJ; Transversal Activities in Applied Genomics, Sciensano, Brussels, Belgium.

Publikováno v: Frontiers in microbiology [Front Microbiol] 2024 Apr 04; Vol. 15, pp. 1336532. Date of Electronic Publication: 2024 Apr 04 (Print Publication: 2024).

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