Zobrazeno 1 - 10
of 15
pro vyhledávání: '"Utpal Bakshi"'
Autor:
Vinod K. Gupta, Utpal Bakshi, Daniel Chang, Aileen R. Lee, John M. Davis, Sriram Chandrasekaran, Yong-Su Jin, Michael F. Freeman, Jaeyun Sung
Publikováno v:
mSystems, Vol 7, Iss 6 (2022)
ABSTRACT Biosynthetic gene clusters (BGCs) in microbial genomes encode bioactive secondary metabolites (SMs), which can play important roles in microbe-microbe and host-microbe interactions. Given the biological significance of SMs and the current pr
Externí odkaz:
https://doaj.org/article/4312be9fe8cb4fda93ae83b491b19994
Gut microbial determinants of clinically important improvement in patients with rheumatoid arthritis
Autor:
Vinod K. Gupta, Kevin Y. Cunningham, Benjamin Hur, Utpal Bakshi, Harvey Huang, Kenneth J. Warrington, Veena Taneja, Elena Myasoedova, John M. Davis, Jaeyun Sung
Publikováno v:
Genome Medicine, Vol 13, Iss 1, Pp 1-20 (2021)
Abstract Background Rapid advances in the past decade have shown that dysbiosis of the gut microbiome is a key hallmark of rheumatoid arthritis (RA). Yet, the relationship between the gut microbiome and clinical improvement in RA disease activity rem
Externí odkaz:
https://doaj.org/article/fbd00a95259145969ce1d6e0669a5c9c
Autor:
Vinod K. Gupta, Minsuk Kim, Utpal Bakshi, Kevin Y. Cunningham, John M. Davis, Konstantinos N. Lazaridis, Heidi Nelson, Nicholas Chia, Jaeyun Sung
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-16 (2020)
A biologically-interpretable and robust metric that provides insight into one’s health status from a gut microbiome sample is an important clinical goal in current human microbiome research. Herein, the authors introduce a species-level index that
Externí odkaz:
https://doaj.org/article/67525171bcbf4ac083b3911c80e1e7d6
Publikováno v:
3 Biotech. 12
Autor:
Vinod K. Gupta, Utpal Bakshi, Daniel Chang, Aileen R. Lee, John M. Davis, Sriram Chandrasekaran, Yong-Su Jin, Michael F. Freeman, Jaeyun Sung
Biosynthetic gene clusters (BGCs) in microbial genomes encode for bioactive secondary metabolites (SMs), which can play important roles in microbe-microbe and host-microbe interactions. Given the biological significance of SMs and the current profoun
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::33e66abf453c9fc06d62554028ef8cf8
https://doi.org/10.1101/2021.07.30.454505
https://doi.org/10.1101/2021.07.30.454505
Autor:
Benjamin Hur, Veena Taneja, Kevin Y. Cunningham, Elena Myasoedova, Jaeyun Sung, Utpal Bakshi, Kenneth J. Warrington, John M. Davis, Vinod K. Gupta, Harvey Huang
BackgroundRapid advances in the past decade have shown that dysbiosis of the gut microbiome is a key hallmark of rheumatoid arthritis (RA). Yet, the relationship between gut microbiome and clinical improvement in RA disease activity remains unclear.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::001473f9bb6675b350bc43dc893a0862
https://doi.org/10.1101/2020.12.30.20249040
https://doi.org/10.1101/2020.12.30.20249040
Autor:
Nicholas Chia, Heidi Nelson, Konstantinos N. Lazaridis, Vinod K. Gupta, John M. Davis, Utpal Bakshi, Kevin Y. Cunningham, Jaeyun Sung, Minsuk Kim
The development of a biologically-interpretable and robust metric that provides clear insight into the general health status (i.e. healthy or non-healthy) of one’s gut microbiome remains an important target in human microbiome research. We introduc
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::afffe931a9c7bba52be672acd1f2a28c
https://doi.org/10.1101/2020.02.24.962100
https://doi.org/10.1101/2020.02.24.962100
Autor:
Rimi Roy, Tarunendu Mapder, Sabyasachi Bhattacharya, Ranadhir Chakraborty, Prosenjit Pyne, Wriddhiman Ghosh, Nibendu Mondal, Svetlana Fernandes, Aninda Mazumdar, Utpal Bakshi, John E. Hallsworth, Moidu Jameela Rameez, Subhrangshu Mandal, William K. O’Neill, Ambarish Mukherjee, A. Peketi, Subhra Kanti Mukhopadhyay, Chayan Roy, Prabir Kumar Haldar
Publikováno v:
Scientific Reports
Scientific Reports, Vol 10, Iss 1, Pp 1-22 (2020)
Roy, C, Rameez, M J, Haldar, P K, Peketi, A, Mondal, N, Bakshi, U, Mapder, T, Pyne, P, Fernandes, S, Bhattacharya, S, Roy, R, Mandal, S, O'Neill, W K, Mazumdar, A, Mukhopadhyay, S K, Mukherjee, A, Chakraborty, R, Hallsworth, J E & Ghosh, W 2020, ' Microbiome and ecology of a hot spring-microbialite system on the Trans-Himalayan Plateau ', Scientific Reports, vol. 10, 5917 . https://doi.org/10.1038/s41598-020-62797-z
Scientific Reports, Vol 10, Iss 1, Pp 1-22 (2020)
Roy, C, Rameez, M J, Haldar, P K, Peketi, A, Mondal, N, Bakshi, U, Mapder, T, Pyne, P, Fernandes, S, Bhattacharya, S, Roy, R, Mandal, S, O'Neill, W K, Mazumdar, A, Mukhopadhyay, S K, Mukherjee, A, Chakraborty, R, Hallsworth, J E & Ghosh, W 2020, ' Microbiome and ecology of a hot spring-microbialite system on the Trans-Himalayan Plateau ', Scientific Reports, vol. 10, 5917 . https://doi.org/10.1038/s41598-020-62797-z
Little is known about life in the boron-rich hot springs of Trans-Himalayas. Here, we explore the geomicrobiology of a 4438-m-high spring which emanates ~70 °C-water from a boratic microbialite called Shivlinga. Due to low atmospheric pressure, the
Autor:
Subhrangshu Mandal, Moidu Jameela Rameez, Chayan Roy, Prosenjit Pyne, Prabir Kumar Haldar, Wriddhiman Ghosh, Utpal Bakshi
Publikováno v:
Computational biology and chemistry. 80
All cultivated members of the phylum Chlorobi are classified under the two classes Chlorobia and Ignavibacteria. The recently-reported, uncultivated genome-species of Chlorobi have not suggested any alteration in the dichotomy of the two classes, but
Autor:
Ivy Mallick, Chandrima Bhattacharyya, Utpal Bakshi, Shayantan Mukherji, Biswajit Bera, Abhrajyoti Ghosh
Publikováno v:
Frontiers in Microbiology. 8
Bacillus aryabhattai AB211 is a plant growth promoting, gram positive firmicute, isolated from the rhizosphere of tea (Camellia sinensis), one of the oldest perennial crops and a major nonalcoholic beverage widely consumed all over the world. The who