Investigation of Distributed and Parallel Performance of a Genetic Algorithm

Autor: Uren, PJ

Genetic algorithms, a stochastic evolutionary computing technique, have demonstrated a capacity for robust, efficient problem solving through highly parallel search space exploration. This work demonstrates how an improvement in performance and effic

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2b1b4aaa25a52c48052047312953a2b5

Riborex: fast and flexible identification of differential translation from Ribo-seq data.

Autor: Li W; Molecular and Computational Biology, Division of Biological Sciences, University of Southern California, Los Angeles, CA, USA., Wang W; Molecular and Computational Biology, Division of Biological Sciences, University of Southern California, Los Angeles, CA, USA., Uren PJ; Molecular and Computational Biology, Division of Biological Sciences, University of Southern California, Los Angeles, CA, USA., Penalva LOF; Department of Cellular and Structural Biology, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.; Children's Cancer Research Institute, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA., Smith AD; Molecular and Computational Biology, Division of Biological Sciences, University of Southern California, Los Angeles, CA, USA.

Publikováno v: Bioinformatics (Oxford, England) [Bioinformatics] 2017 Jun 01; Vol. 33 (11), pp. 1735-1737.

IGF2BP3 Modulates the Interaction of Invasion-Associated Transcripts with RISC.

Autor: Ennajdaoui H; Department of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA; The Donnelly Centre, University of Toronto, Toronto, ON M5S 1A1, Canada., Howard JM; Department of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA., Sterne-Weiler T; Department of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA; The Donnelly Centre, University of Toronto, Toronto, ON M5S 1A1, Canada., Jahanbani F; Department of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA; Department of Genetics, Stanford University, 3165 Porter Drive, Palo Alto, CA 94304, USA., Coyne DJ; Department of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA., Uren PJ; Molecular and Computational Biology Section, Division of Biological Sciences, University of Southern California, Los Angeles, CA 90089, USA., Dargyte M; Department of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA., Katzman S; Center for Biomolecular Science and Engineering, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA., Draper JM; Department of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA., Wallace A; Department of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA., Cazarez O; Department of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA., Burns SC; Children's Cancer Research Institute, University of Texas Health Science Center at San Antonio, San Antonio, TX 78229, USA., Qiao M; Children's Cancer Research Institute, University of Texas Health Science Center at San Antonio, San Antonio, TX 78229, USA., Hinck L; Department of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA., Smith AD; Molecular and Computational Biology Section, Division of Biological Sciences, University of Southern California, Los Angeles, CA 90089, USA., Toloue MM; Bioo Scientific Corporation, 7500 Burleston Road, Austin, TX 78744, USA., Blencowe BJ; The Donnelly Centre, University of Toronto, Toronto, ON M5S 1A1, Canada., Penalva LO; Children's Cancer Research Institute, University of Texas Health Science Center at San Antonio, San Antonio, TX 78229, USA., Sanford JR; Department of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA. Electronic address: jsanfor2@ucsc.edu.

Publikováno v: Cell reports [Cell Rep] 2016 May 31; Vol. 15 (9), pp. 1876-83. Date of Electronic Publication: 2016 May 19.

Aberrant sperm DNA methylation predicts male fertility status and embryo quality.

Autor: Aston KI; Department of Surgery, University of Utah Andrology and IVF Laboratories, University of Utah School of Medicine, Salt Lake City, Utah., Uren PJ; Molecular and Computational Biology, University of Southern California, Los Angeles, California., Jenkins TG; Department of Surgery, University of Utah Andrology and IVF Laboratories, University of Utah School of Medicine, Salt Lake City, Utah., Horsager A; Episona, Inc, Glendale, California., Cairns BR; Department of Oncological Sciences, Huntsman Cancer Institute, University of Utah School of Medicine, Salt Lake City, Utah; Howard Hughes Medical Institute, Chevy Chase, Maryland., Smith AD; Molecular and Computational Biology, University of Southern California, Los Angeles, California., Carrell DT; Department of Surgery, University of Utah Andrology and IVF Laboratories, University of Utah School of Medicine, Salt Lake City, Utah; Department of Obstetrics and Gynecology and Department of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah. Electronic address: douglas.carrell@hsc.utah.edu.

Publikováno v: Fertility and sterility [Fertil Steril] 2015 Dec; Vol. 104 (6), pp. 1388-97.e1-5. Date of Electronic Publication: 2015 Sep 08.

RNA-Binding Protein Musashi1 Is a Central Regulator of Adhesion Pathways in Glioblastoma.

Autor: Uren PJ; Molecular and Computational Biology Section, Division of Biological Sciences, University of Southern California, Los Angeles, California, USA., Vo DT; Children's Cancer Research Institute, University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA Department of Cellular and Structural Biology, University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA., de Araujo PR; Children's Cancer Research Institute, University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA Department of Cellular and Structural Biology, University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA., Pötschke R; University Medical Center, Department of Children's Hospital, Halle (Saale), Germany., Burns SC; Children's Cancer Research Institute, University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA., Bahrami-Samani E; Molecular and Computational Biology Section, Division of Biological Sciences, University of Southern California, Los Angeles, California, USA., Qiao M; Children's Cancer Research Institute, University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA., de Sousa Abreu R; Children's Cancer Research Institute, University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA., Nakaya HI; School of Pharmaceutical Sciences, University of São Paulo, São Paulo, Brazil Department of Pathology, Emory Vaccine Center, Yerkes National Primate Research Center, Atlanta, Georgia, USA., Correa BR; Children's Cancer Research Institute, University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA., Kühnöl C; University Medical Center, Department of Children's Hospital, Halle (Saale), Germany., Ule J; Department of Molecular Neuroscience, Institute of Neurology, University College London, London, United Kingdom., Martindale JL; Laboratory of Genetics and Genomics, National Institute on Aging, National Institutes of Health, Baltimore, Maryland, USA., Abdelmohsen K; Laboratory of Genetics and Genomics, National Institute on Aging, National Institutes of Health, Baltimore, Maryland, USA., Gorospe M; Laboratory of Genetics and Genomics, National Institute on Aging, National Institutes of Health, Baltimore, Maryland, USA., Smith AD; Molecular and Computational Biology Section, Division of Biological Sciences, University of Southern California, Los Angeles, California, USA andrewds@usc.edu penalva@uthscsa.edu., Penalva LO; Children's Cancer Research Institute, University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA Department of Cellular and Structural Biology, University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA andrewds@usc.edu penalva@uthscsa.edu.

Publikováno v: Molecular and cellular biology [Mol Cell Biol] 2015 Sep 01; Vol. 35 (17), pp. 2965-78. Date of Electronic Publication: 2015 Jun 22.