Zobrazeno 1 - 6
of 6
pro vyhledávání: '"Upton, Graham JG"'
Publikováno v:
BMC Genomics, Vol 9, Iss 1, p 613 (2008)
Abstract Background High Density Oligonucleotide arrays (HDONAs), such as the Affymetrix HG-U133A GeneChip, use sets of probes chosen to match specified genes, with the expectation that if a particular gene is highly expressed then all the probes in
Externí odkaz:
https://doaj.org/article/f7142104eda24bf5a4b32e53a66aeb3b
Autor:
Sanchez Graillet, Olivia, Stalteri, Maria A, Rowsell, Joanna, Upton, Graham JG, Harrison, Andrew P
Publikováno v:
Journal of Integrative Bioinformatics, Vol 7, Iss 2, Pp 27-48 (2010)
SummaryWe have used large surveys of Affymetrix GeneChip HG-U133_Plus_2 data in the public domain to conduct a study of antisense expression across diverse conditions. We derive correlations between groups of probes which map uniquely to the same exo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1f93dd1493c813aa27dfc6ae5bda6903
https://doi.org/10.1515/jib-2010-114
https://doi.org/10.1515/jib-2010-114
Autor:
Memon, Farhat N, Owen, Anne M, Sanchez Graillet, Olivia, Upton, Graham JG, Harrison, Andrew P
Publikováno v:
Journal of Integrative Bioinformatics, Vol 7, Iss 2, Pp 12-20 (2010)
SummaryA tetramer quadruplex structure is formed by four parallel strands of DNA/ RNA containing runs of guanine. These quadruplexes are able to form because guanine can Hoogsteen hydrogen bond to other guanines, and a tetrad of guanines can form a s
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::36bf188cffb5f9687dc3070ecdc40b21
https://doi.org/10.1515/jib-2010-111
https://doi.org/10.1515/jib-2010-111
Autor:
Sanchez Graillet, Olivia, Rowsell, Joanna, Langdon, William B, Stalteri, Maria, Arteaga-Salas, Jose M, Upton, Graham JG, Harrison, Andrew P
Publikováno v:
Journal of Integrative Bioinformatics, Vol 5, Iss 2, Pp 104-116 (2008)
SummaryWe have developed a computational pipeline to analyse large surveys of A ymetrix GeneChips, for example NCBI’s Gene Expression Omnibus. GEO samples data for many organisms, tissues and phenotypes. Because of this experimental diversity, any
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f148757027c8223efc7d382a9a7aaf0c
https://pubmed.ncbi.nlm.nih.gov/20134059
https://pubmed.ncbi.nlm.nih.gov/20134059
Autor:
Upton GJ; Departments of Mathematical and Biological Sciences, University of Essex, Wivenhoe Park, Colchester, Essex CO43SQ, UK. gupton@essex.ac.uk, Langdon WB, Harrison AP
Publikováno v:
BMC genomics [BMC Genomics] 2008 Dec 18; Vol. 9, pp. 613. Date of Electronic Publication: 2008 Dec 18.