A diet-dependent host metabolite shapes the gut microbiota to protect from autoimmunity

Autor: Alexander, Margaret, Upadhyay, Vaibhav, Rock, Rachel, Ramirez, Lorenzo, Trepka, Kai, Puchalska, Patrycja, Orellana, Diego, Ang, Qi Yan, Whitty, Caroline, Turnbaugh, Jessie A., Tian, Yuan, Dumlao, Darren, Nayak, Renuka, Patterson, Andrew, Newman, John C., Crawford, Peter A., Turnbaugh, Peter J.

Publikováno v: In Cell Reports 26 November 2024 43(11)

Biophysical evolution of the receptor-binding domains of SARS-CoVs

Autor: Upadhyay, Vaibhav, Panja, Sudipta, Lucas, Alexandra, Patrick, Casey, Mallela, Krishna M.G.

Publikováno v: In Biophysical Journal 5 December 2023 122(23):4489-4502

A myeloid program associated with COVID-19 severity is decreased by therapeutic blockade of IL-6 signaling

Autor: Abe-Jones, Yumiko, Adkisson, Michael, Ansel, K. Mark, Asthana, Saurabh, Beagle, Alexander, Bhide, Sharvari, Cai, Cathy, Caldera, Saharai, Calvo, Maria, Carrillo, Sidney A., Chak, Suzanna, Christenson, Stephanie, Collins, Zachary, Darmanis, Spyros, Detweiler, Angela, DeVoe, Catherine, Eckalbar, Walter, Giberson, Jeremy, Gonzalez, Ana, Gordon, Gracie, Serpa, Paula Hayakawa, Jauregui, Alejandra, Jones, Chayse, Ke, Serena, Kushnoor, Divya, Lea, Tasha, Lee, Deanna, Leligdowicz, Aleksandra, Liu, Yale, Mahboob, Salman, Maliskova, Lenka, Matthay, Michael, McCarthy, Elizabeth, Muñoz-Sandoval, Priscila, Neff, Norma, Nguyen, Viet, Nigam, Nishita, Parada, Randy, Phelps, Maira, Pierce, Logan, Prasad, Priya, Rashid, Sadeed, Reeder, Gabriella, Rodriguez, Nicklaus, Samad, Bushra, Schroeder, Andrew, Shaw, Cole, Shen, Alan, Sigman, Austin, Sinha, Pratik, Spitzer, Matthew, Sunshine, Sara, Tang, Kevin, Altamirano, Luz Torres, Tsitsiklis, Alexandra, Tumurbaatar, Erden, Upadhyay, Vaibhav, Whatley, Alexander, Willmore, Andrew, Wilson, Michael, Winkler, Juliane, Wong, Kristine, Yee, Kimberly, Yu, Michelle, Zhou, Mingyue, Zhu, Wandi S., Hackney, Jason A., Shivram, Haridha, Vander Heiden, Jason, Overall, Chris, Orozco, Luz, Gao, Xia, Kim, Eugene, West, Nathan, Qamra, Aditi, Chang, Diana, Chakrabarti, Arindam, Choy, David F., Combes, Alexis J., Courau, Tristan, Fragiadakis, Gabriela K., Rao, Arjun Arkal, Ray, Arja, Tsui, Jessica, Hu, Kenneth, Kuhn, Nicholas F., Krummel, Matthew F., Erle, David J., Kangelaris, Kirsten, Sarma, Aartik, Lyon, Zoe, Calfee, Carolyn S., Woodruff, Prescott G., Ghale, Rajani, Mick, Eran, Byrne, Ashley, Zha, Beth Shoshana, Langelier, Charles, Hendrickson, Carolyn M., van der Wijst, Monique G.P., Hartoularos, George C., Grant, Tianna, Bueno, Raymund, Lee, David S., Greenland, John R., Sun, Yang, Perez, Richard, Ogorodnikov, Anton, Ward, Alyssa, Ye, Chun Jimmie, Ramalingam, Thiru, McBride, Jacqueline M., Cai, Fang, Teterina, Anastasia, Bao, Min, Tsai, Larry, Rosas, Ivan O., Regev, Aviv, Kapadia, Sharookh B., Bauer, Rebecca N., Rosenberger, Carrie M.

Publikováno v: In iScience 20 October 2023 26(10)

Phage Immunoprecipitation‐Sequencing Reveals CDHR5 Autoantibodies in Select Patients With Interstitial Lung Disease.

Autor: Upadhyay, Vaibhav, Yoon, Young me, Vazquez, Sara E., Velez, Tania E., Jones, Kirk D., Lee, Cathryn T., Law, Christopher S., Wolters, Paul J., Lee, Seoyeon, Yang, Monica M., Farrand, Erica, Noth, Imre, Strek, Mary E., Anderson, Mark S., DeRisi, Joseph L., Sperling, Anne I., Shum, Anthony K.

Publikováno v: ACR Open Rheumatology; Sep2024, Vol. 6 Issue 9, p568-580, 13p

Investigating Ketone Bodies as Immunometabolic Countermeasures against Respiratory Viral Infections

Autor: Stubbs, Brianna J., Koutnik, Andrew P., Goldberg, Emily L., Upadhyay, Vaibhav, Turnbaugh, Peter J., Verdin, Eric, Newman, John C.

Publikováno v: In Med 18 December 2020 1(1):43-65