Signals of positive selection in genomes of palearctic Myotis-bats coexisting with a fungal pathogen.

Autor: Twort VG; Finnish Museum of Natural History, BatLab Finland, University of Helsinki, Helsinki, Finland., Laine VN; Finnish Museum of Natural History, BatLab Finland, University of Helsinki, Helsinki, Finland., Field KA; Department of Biology, Bucknell University, Lewisburg, PA, USA., Whiting-Fawcett F; Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, UK., Ito F; Finnish Museum of Natural History, BatLab Finland, University of Helsinki, Helsinki, Finland., Reiman M; Finnish Museum of Natural History, BatLab Finland, University of Helsinki, Helsinki, Finland., Bartonicka T; Dept. Botany and Zoology, Faculty of Science, Masaryk University, Kotlarska 2, Brno, 611 37, Czech Republic., Fritze M; Zoological Institute and Museum, University of Greifswald, Greifswald, Germany.; German Bat Observatory, Berlin, Germany.; Competence Center for Bat Conservation Saxony Anhalt, in the South Harz Karst Landscape Biosphere Reserve, Südharz, Germany., Ilyukha VA; Papanin Institute for Biology of Inland Waters, Russian Academy of Sciences, Borok, Russia., Belkin VV; Institute of Biology, Karelian Research Centre, Russian Academy of Sciences, Petrozavodsk, Russia., Khizhkin EA; Institute of Biology, Karelian Research Centre, Russian Academy of Sciences, Petrozavodsk, Russia., Reeder DM; Department of Biology, Bucknell University, Lewisburg, PA, USA., Fukui D; Graduate School of Agricultural and Life Sciences, The University of Tokyo Fuji Iyashinomori Woodland Study Center, The University of Tokyo, Yamanakako, Japan., Jiang TL; Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, Changchun, China., Lilley TM; Finnish Museum of Natural History, BatLab Finland, University of Helsinki, Helsinki, Finland. thomas.lilley@helsinki.fi.

Publikováno v: BMC genomics [BMC Genomics] 2024 Sep 03; Vol. 25 (1), pp. 828. Date of Electronic Publication: 2024 Sep 03.

Screening Host Genomic Data for Wolbachia Infections.

Autor: Valerio F; Insect Symbiosis Ecology and Evolution, Organismal and Evolutionary Biology Research Program, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland.; Research Centre for Ecological Changes, University of Helsinki, Helsinki, Finland., Twort VG; The Finnish Museum of Natural History, Luomus, University of Helsinki, Helsinki, Finland., Duplouy A; Insect Symbiosis Ecology and Evolution, Organismal and Evolutionary Biology Research Program, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland. anne.duplouy@helsinki.fi.; Research Centre for Ecological Changes, University of Helsinki, Helsinki, Finland. anne.duplouy@helsinki.fi.

Publikováno v: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2024; Vol. 2739, pp. 251-274.

Exploring bycatch diversity of organisms in whole genome sequencing of Erebidae moths (Lepidoptera).

Autor: Ghanavi HR; Department of Biology, Lund University, Ecology Building, Sölvegatan 37, 22362, Lund, Skåne, Sweden. hamid.ghanavi@biol.lu.se., Twort VG; Department of Biology, Lund University, Ecology Building, Sölvegatan 37, 22362, Lund, Skåne, Sweden.; The Finnish Museum of Natural History, Luomus, Zoology Unit, The University of Helsinki, Helsinki, Finland., Duplouy A; Department of Biology, Lund University, Ecology Building, Sölvegatan 37, 22362, Lund, Skåne, Sweden.; Insect Symbiosis Ecology and Evolution, Organismal and Evolutionary Biology Research Program, The University of Helsinki, Helsinki, Finland.

Publikováno v: Scientific reports [Sci Rep] 2021 Dec 30; Vol. 11 (1), pp. 24499. Date of Electronic Publication: 2021 Dec 30.

Publisher Correction: The tuatara genome reveals ancient features of amniote evolution.

Autor: Gemmell NJ; Department of Anatomy, University of Otago, Dunedin, New Zealand. neil.gemmell@otago.ac.nz., Rutherford K; Department of Anatomy, University of Otago, Dunedin, New Zealand., Prost S; LOEWE-Center for Translational Biodiversity Genomics, Senckenberg Museum, Frankfurt, Germany.; South African National Biodiversity Institute, National Zoological Garden, Pretoria, South Africa., Tollis M; School of Life Sciences, Arizona State University, Tempe, AZ, USA.; School of Informatics, Computing, and Cyber Systems, Northern Arizona University, Flagstaff, AZ, USA., Winter D; School of Fundamental Sciences, Massey University, Palmerston North, New Zealand., Macey JR; Peralta Genomics Institute, Oakland, CA, USA., Adelson DL; School of Biological Sciences, The University of Adelaide, Adelaide, South Australia, Australia., Suh A; Department of Ecology and Genetics - Evolutionary Biology, Evolutionary Biology Centre (EBC), Uppsala University, Uppsala, Sweden.; Department of Organismal Biology - Systematic Biology, Evolutionary Biology Centre (EBC), Uppsala University, Uppsala, Sweden., Bertozzi T; School of Biological Sciences, The University of Adelaide, Adelaide, South Australia, Australia.; Evolutionary Biology Unit, South Australian Museum, Adelaide, South Australia, Australia., Grau JH; Amedes Genetics, Amedes Medizinische Dienstleistungen, Berlin, Germany.; Museum für Naturkunde Berlin, Leibniz-Institut für Evolutions- und Biodiversitätsforschung an der Humboldt-Universität zu Berlin, Berlin, Germany., Organ C; Department of Earth Sciences, Montana State University, Bozeman, MT, USA., Gardner PP; Department of Biochemistry, University of Otago, Dunedin, New Zealand., Muffato M; European Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK., Patricio M; European Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK., Billis K; European Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK., Martin FJ; European Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK., Flicek P; European Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK., Petersen B; Section for Evolutionary Genomics, The GLOBE Institute, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark., Kang L; Edward Via College of Osteopathic Medicine, Blacksburg, VA, USA., Michalak P; Edward Via College of Osteopathic Medicine, Blacksburg, VA, USA.; Center for One Health Research, Virginia-Maryland College of Veterinary Medicine, Blacksburg, VA, USA.; Institute of Evolution, University of Haifa, Haifa, Israel., Buckley TR; Manaaki Whenua - Landcare Research, Auckland, New Zealand.; School of Biological Sciences, The University of Auckland, Auckland, New Zealand., Wilson M; School of Life Sciences, Arizona State University, Tempe, AZ, USA., Cheng Y; School of Life and Environmental Sciences, The University of Sydney, Sydney, New South Wales, Australia., Miller H; Biomatters, Auckland, New Zealand., Schott RK; Department of Vertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington, DC, USA., Jordan MD; The New Zealand Institute for Plant and Food Research, Auckland, New Zealand., Newcomb RD; The New Zealand Institute for Plant and Food Research, Auckland, New Zealand., Arroyo JI; Departamento de Ecología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile., Valenzuela N; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA, USA., Hore TA; Department of Anatomy, University of Otago, Dunedin, New Zealand., Renart J; Instituto de Investigaciones Biomédicas 'Alberto Sols' CSIC-UAM, Madrid, Spain., Peona V; Department of Ecology and Genetics - Evolutionary Biology, Evolutionary Biology Centre (EBC), Uppsala University, Uppsala, Sweden.; Department of Organismal Biology - Systematic Biology, Evolutionary Biology Centre (EBC), Uppsala University, Uppsala, Sweden., Peart CR; Department of Ecology and Genetics - Evolutionary Biology, Evolutionary Biology Centre (EBC), Uppsala University, Uppsala, Sweden.; Division of Evolutionary Biology, Faculty of Biology, Ludwig-Maximilian University of Munich, Planegg-Martinsried, Germany., Warmuth VM; Department of Ecology and Genetics - Evolutionary Biology, Evolutionary Biology Centre (EBC), Uppsala University, Uppsala, Sweden.; Division of Evolutionary Biology, Faculty of Biology, Ludwig-Maximilian University of Munich, Planegg-Martinsried, Germany., Zeng L; School of Biological Sciences, The University of Adelaide, Adelaide, South Australia, Australia., Kortschak RD; School of Biological Sciences, The University of Adelaide, Adelaide, South Australia, Australia., Raison JM; School of Biological Sciences, The University of Adelaide, Adelaide, South Australia, Australia., Zapata VV; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA, USA., Wu Z; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA, USA., Santesmasses D; Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology, Universitat Pompeu Fabra (UPF), Barcelona, Spain., Mariotti M; Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology, Universitat Pompeu Fabra (UPF), Barcelona, Spain., Guigó R; Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology, Universitat Pompeu Fabra (UPF), Barcelona, Spain., Rupp SM; School of Life Sciences, Arizona State University, Tempe, AZ, USA., Twort VG; Manaaki Whenua - Landcare Research, Auckland, New Zealand.; School of Biological Sciences, The University of Auckland, Auckland, New Zealand., Dussex N; Department of Anatomy, University of Otago, Dunedin, New Zealand., Taylor H; Department of Anatomy, University of Otago, Dunedin, New Zealand., Abe H; Department of Anatomy, University of Otago, Dunedin, New Zealand., Bond DM; Department of Anatomy, University of Otago, Dunedin, New Zealand., Paterson JM; School of Biological Sciences, University of Canterbury, Christchurch, New Zealand., Mulcahy DG; Global Genome Initiative, National Museum of Natural History, Smithsonian Institution, Washington, DC, USA., Gonzalez VL; Global Genome Initiative, National Museum of Natural History, Smithsonian Institution, Washington, DC, USA., Barbieri CG; Peralta Genomics Institute, Oakland, CA, USA., DeMeo DP; Peralta Genomics Institute, Oakland, CA, USA., Pabinger S; Austrian Institute of Technology (AIT), Center for Health and Bioresources, Molecular Diagnostics, Vienna, Austria., Van Stijn T; AgResearch, Invermay Agricultural Centre, Mosgiel, New Zealand., Clarke S; AgResearch, Invermay Agricultural Centre, Mosgiel, New Zealand., Ryder O; San Diego Zoo Institute for Conservation Research, Escondido, CA, USA., Edwards SV; Department of Organismic and Evolutionary Biology and the Museum of Comparative Zoology, Harvard University, Cambridge, MA, USA., Salzberg SL; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA., Anderson L; School of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand., Nelson N; School of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand., Stone C; Ngatiwai Trust Board, Whangarei, New Zealand.

Publikováno v: Nature [Nature] 2020 Sep; Vol. 585 (7823), pp. E3.

New Zealand Tree and Giant Wētā (Orthoptera) Transcriptomics Reveal Divergent Selection Patterns in Metabolic Loci.

Autor: Twort VG; School of Biological Sciences, University of Auckland, New Zealand.; Manaaki Whenua - Landcare Research, Auckland, New Zealand.; Department of Biology, Lund University, Lund, Sweden., Newcomb RD; School of Biological Sciences, University of Auckland, New Zealand.; The New Zealand Institute for Plant & Food Research Ltd, Auckland, New Zealand., Buckley TR; School of Biological Sciences, University of Auckland, New Zealand.; Manaaki Whenua - Landcare Research, Auckland, New Zealand.

Publikováno v: Genome biology and evolution [Genome Biol Evol] 2019 Apr 01; Vol. 11 (4), pp. 1293-1306.