Zobrazeno 1 - 10
of 12
pro vyhledávání: '"Trenton M. Peters-Clarke"'
Autor:
Noah M. Lancaster, Pavel Sinitcyn, Patrick Forny, Trenton M. Peters-Clarke, Caroline Fecher, Andrew J. Smith, Evgenia Shishkova, Tabiwang N. Arrey, Anna Pashkova, Margaret Lea Robinson, Nicholas Arp, Jing Fan, Juli Hansen, Andrea Galmozzi, Lia R. Serrano, Julie Rojas, Audrey P. Gasch, Michael S. Westphall, Hamish Stewart, Christian Hock, Eugen Damoc, David J. Pagliarini, Vlad Zabrouskov, Joshua J. Coon
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-18 (2024)
Abstract Owing to its roles in cellular signal transduction, protein phosphorylation plays critical roles in myriad cell processes. That said, detecting and quantifying protein phosphorylation has remained a challenge. We describe the use of a novel
Externí odkaz:
https://doaj.org/article/06a4611f710d4885ae910c3dc977ec18
Autor:
Yuming Jiang, Devasahayam Arokia Balaya Rex, Dina Schuster, Benjamin A. Neely, Germán L. Rosano, Norbert Volkmar, Amanda Momenzadeh, Trenton M. Peters-Clarke, Susan B. Egbert, Simion Kreimer, Emma H. Doud, Oliver M. Crook, Amit Kumar Yadav, Muralidharan Vanuopadath, Adrian D. Hegeman, Martín L. Mayta, Anna G. Duboff, Nicholas M. Riley, Robert L. Moritz, Jesse G. Meyer
Publikováno v:
ACS Measurement Science Au, Vol 4, Iss 4, Pp 338-417 (2024)
Externí odkaz:
https://doaj.org/article/77b50bdc366d4ecc8281c0455ca0c0c7
Autor:
Mazdak M. Bradberry, Trenton M. Peters-Clarke, Evgenia Shishkova, Edwin R. Chapman, Joshua J. Coon
Publikováno v:
Cell Reports, Vol 42, Iss 4, Pp 112368- (2023)
Summary: At mammalian neuronal synapses, synaptic vesicle (SV) glycoproteins are essential for robust neurotransmission. Asparagine (N)-linked glycosylation is required for delivery of the major SV glycoproteins synaptophysin and SV2A to SVs. Despite
Externí odkaz:
https://doaj.org/article/ad93c95b92b448e9b14d5c1e4caebb92
Publikováno v:
J Am Chem Soc
We report DNA-scaffolded synergistic catalysis, a concept that combines the diverse reaction scope of synergistic catalysis with the ability of DNA to precisely pre-organize abiotic groups and undergo stimuli-triggered conformational changes. As an i
Publikováno v:
J Am Soc Mass Spectrom
Ion-ion reactions are valuable tools in mass-spectrometry-based peptide and protein sequencing. To boost the generation of sequence-informative fragment ions from low charge-density precursors, supplemental activation methods, via vibrational and pho
Autor:
Mazdak M. Bradberry, Trenton M. Peters-Clarke, Evgenia Shishkova, Edwin R. Chapman, Joshua J. Coon
At neuronal synapses, synaptic vesicles (SVs) require glycoproteins for normal trafficking, and N-linked glycosylation is required for delivery of the major SV glycoproteins synaptophysin and SV2A to SVs. The molecular compositions of SV N-glycans, w
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::306f8a47f168b889c5d71eddbff3d3c7
https://doi.org/10.1101/2022.07.06.499060
https://doi.org/10.1101/2022.07.06.499060
Autor:
Kenneth W. Lee, Trenton M. Peters-Clarke, Keaton L. Mertz, Graeme C. McAlister, John E. P. Syka, Michael S. Westphall, Joshua J. Coon
Publikováno v:
Anal Chem
Isobaric tagging facilitates multiplexed experiments that can determine sequences and relative amounts of peptides in biological samples using tandem mass spectrometry (MS(n)). Limited reporter ion generation limits quantitative accuracy and precisio
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::36e97390daf0e9ecbfe18ff8d7c9ef97
https://europepmc.org/articles/PMC8985229/
https://europepmc.org/articles/PMC8985229/
Autor:
Jean M. Lodge, Michael S. Westphall, Kevin L. Schauer, Joshua J. Coon, Nicholas M. Riley, Trenton M. Peters-Clarke
Publikováno v:
Anal Chem
Photoactivation and photodissociation have long proven to be useful tools in tandem mass spectrometry, but implementation often involves cumbersome and potentially dangerous configurations. Here, we redress this problem by using a fiber-optic cable t
Publikováno v:
J Proteome Res
Journal of Proteome Research
Journal of Proteome Research
Shotgun proteomics techniques infer the presence and quantity of proteins using peptide proxies produced by cleavage of the proteome with a protease. Most protein quantitation strategies assume that multiple peptides derived from a protein will behav
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::070ec4796f93e8ac182cb21d6198e19c
https://europepmc.org/articles/PMC8592057/
https://europepmc.org/articles/PMC8592057/
Autor:
Vanessa Linke, Edna A. Trujillo, Harold A. Singer, Dain R. Brademan, Deane F. Mosher, Laura K. Muehlbauer, Qiuwen Quan, Evgenia Shishkova, Matthew N. Bernstein, Bradford S Schwartz, Ian J. Miller, Ariel Jaitovich, Jesse G. Meyer, Trenton M. Peters-Clarke, Joshua J. Coon, Scott Swanson, Amit Chopra, Hau Chieng, Brett Paulson, Katherine A. Overmyer, Yunyun Zhu, Joseph Balnis, Anupama Tiwari, Yuchen He, Marc A. Judson, Ron Stewart, Lisa A. Drake, Alejandro P. Adam, Lia R. Serrano
Publikováno v:
Cell Systems
Journal of Translational Medicine
medRxiv
article-version (status) pre
article-version (number) 1
Journal of Translational Medicine
medRxiv
article-version (status) pre
article-version (number) 1
We performed RNA-Seq and high-resolution mass spectrometry on 128 blood samples from COVID-19 positive and negative patients with diverse disease severities and outcomes. Quantified transcripts, proteins, metabolites, and lipids were associated with
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::590b3e958caa102293bf216fffc2d6d4
https://doi.org/10.1101/2020.07.17.20156513
https://doi.org/10.1101/2020.07.17.20156513