Zobrazeno 1 - 10
of 25
pro vyhledávání: '"Travis J Lawrence"'
Publikováno v:
BMC Evolutionary Biology, Vol 19, Iss 1, Pp 1-13 (2019)
Abstract Background Eukaryotes acquired the trait of oxygenic photosynthesis through endosymbiosis of the cyanobacterial progenitor of plastid organelles. Despite recent advances in the phylogenomics of Cyanobacteria, the phylogenetic root of plastid
Externí odkaz:
https://doaj.org/article/70008b7895d44176a38f1d69341a0fe4
Autor:
Paul Kelly, Fatemeh Hadi-Nezhad, Dennis Y Liu, Travis J Lawrence, Roger G Linington, Michael Ibba, David H Ardell
Publikováno v:
PLoS Neglected Tropical Diseases, Vol 14, Iss 2, p e0007983 (2020)
The development of chemotherapies against eukaryotic pathogens is especially challenging because of both the evolutionary conservation of drug targets between host and parasite, and the evolution of strain-dependent drug resistance. There is a strong
Externí odkaz:
https://doaj.org/article/2bcd2afbb04e4533845b81c890cb991e
Publikováno v:
PeerJ, Vol 8, p e8534 (2020)
Background Microbiomes are extremely important for their host organisms, providing many vital functions and extending their hosts’ phenotypes. Natural studies of host-associated microbiomes can be difficult to interpret due to the high complexity o
Externí odkaz:
https://doaj.org/article/5cf337abd1c3477c8c3386daf86e619c
Autor:
Bryan T. Piatkowski, Dana L. Carper, Alyssa A. Carrell, I-Min A. Chen, Alicia Clum, Chris Daum, Emiley A. Eloe-Fadrosh, Daniel Gilbert, Gustaf Granath, Marcel Huntemann, Sara S. Jawdy, Ingeborg Jenneken Klarenberg, Joel E. Kostka, Nikos C. Kyrpides, Travis J. Lawrence, Supratim Mukherjee, Mats B. Nilsson, Krishnaveni Palaniappan, Dale A. Pelletier, Christa Pennacchio, T. B. K. Reddy, Simon Roux, A. Jonathan Shaw, Denis Warshan, Tatjana Živković, David J. Weston
Publikováno v:
Microbiology resource announcements, vol 11, iss 10
Microbiology resource announcements, 11(10), 1-5. American Society for Microbiology
Microbiology resource announcements, 11(10), 1-5. American Society for Microbiology
We present 49 metagenome assemblies of the microbiome associated with Sphagnum (peat moss) collected from ambient, artificially warmed, and geothermally warmed conditions across Europe. These data will enable further research regarding the impact of
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b7c23f15934fb3d8203bc72fc267879b
https://doi.org/10.1128/mra.00400-22
https://doi.org/10.1128/mra.00400-22
Autor:
Alyssa A. Carrell, Travis J. Lawrence, Kristine Grace M. Cabugao, Dana L. Carper, Dale A. Pelletier, Jun Hyung Lee, Sara S. Jawdy, Jane Grimwood, Jeremy Schmutz, Paul J. Hanson, A. Jonathan Shaw, David J. Weston
Publikováno v:
New Phytologist. 234:2111-2125
Sphagnum peatmosses are fundamental members of peatland ecosystems, where they contribute to the uptake and long-term storage of atmospheric carbon. Warming threatens Sphagnum mosses and is known to alter the composition of their associated microbiom
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::375e18fcf1c4b69680420af57289325e
https://doi.org/10.1111/nph.18072
https://doi.org/10.1111/nph.18072
Autor:
Patricia MB Saint-Vincent, Mary Ridout, Nancy L. Engle, Travis J. Lawrence, Meredith L. Yeary, Timothy J. Tschaplinski, George Newcombe, Dale A. Pelletier
Publikováno v:
Microorganisms, Vol 8, Iss 8, p 1137 (2020)
Pseudomonas syringae is a ubiquitous plant pathogen, infecting both woody and herbaceous plants and resulting in devastating agricultural crop losses. Characterized by a remarkable specificity for plant hosts, P. syringae pathovars utilize a number o
Externí odkaz:
https://doaj.org/article/3782d87720204acd94d0c2cd74f0d2f7
Autor:
A. Jonathan Shaw, Dušan Veličković, Dana L. Carper, Hugh D. Mitchell, David J. Weston, Jeremy Schmutz, Trent R. Northen, Dale A. Pelletier, Travis J Lawrence, Alyssa A. Carrell, Benjamin P. Bowen, Jane Grimwood, Christopher R. Anderton, Galya Orr, Lye Meng Markillie, Katherine B. Louie, Sara S. Jawdy, Rosalie K. Chu
Publikováno v:
The ISME journal, vol 16, iss 4
Interactions between Sphagnum (peat moss) and cyanobacteria play critical roles in terrestrial carbon and nitrogen cycling processes. Knowledge of the metabolites exchanged, the physiological processes involved, and the environmental conditions allow
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::37fba2462970718057f5627497b1d427
https://doi.org/10.1038/s41396-021-01136-0
https://doi.org/10.1038/s41396-021-01136-0
Autor:
Julie Takagi, Kazuhiro Aoki, Bradley S. Turner, Sabrina Lamont, Sylvain Lehoux, Nicole Kavanaugh, Megha Gulati, Ashley Valle Arevalo, Travis J. Lawrence, Colin Y. Kim, Bhavya Bakshi, Mayumi Ishihara, Clarissa J. Nobile, Richard D. Cummings, Daniel J. Wozniak, Michael Tiemeyer, Rachel Hevey, Katharina Ribbeck
Publikováno v:
Nature chemical biology, vol 18, iss 7
Mucins are large gel-forming polymers inside the mucus barrier that inhibit the yeast-to-hyphal transition of Candida albicans, a key virulence trait of this important human fungal pathogen. However, the molecular motifs in mucins that inhibit filame
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6f98d7bf7c63f8db4e7563676db3a487
https://escholarship.org/uc/item/60c3n6v2
https://escholarship.org/uc/item/60c3n6v2
Publikováno v:
Bioinformatics
Motivation Structure-conditioned information statistics have proven useful to predict and visualize tRNA Class-Informative Features (CIFs) and their evolutionary divergences. Although permutation P-values can quantify the significance of CIF divergen
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5754d993b4ea0989abf12cad91c82da4
https://doi.org/10.1093/bioinformatics/btab247
https://doi.org/10.1093/bioinformatics/btab247
Autor:
Travis J. Lawrence, Kyle T. Kauffman, Katherine C.H. Amrine, Dana L. Carper, Raymond S. Lee, Peter J. Becich, Claudia J. Canales, David H. Ardell
Publikováno v:
Frontiers in Genetics, Vol 6 (2015)
FAST (FAST Analysis of Sequences Toolbox) provides simple, powerful open source command-line tools to filter, transform, annotate and analyze biological sequence data. Modeled after the GNU (GNU’s Not Unix) Textutils such as grep, cut, and tr, FAST
Externí odkaz:
https://doaj.org/article/d0e88892743e4ae5ac98872de814d79b