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Meta-Analysis of the Alzheimer's Disease Human Brain Transcriptome and Functional Dissection in Mouse Models.

Autor: Wan YW; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Jan and Dan Duncan Neurologic Research Institute, Texas Children's Hospital, Houston, TX 77030, USA., Al-Ouran R; Jan and Dan Duncan Neurologic Research Institute, Texas Children's Hospital, Houston, TX 77030, USA; Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA., Mangleburg CG; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Jan and Dan Duncan Neurologic Research Institute, Texas Children's Hospital, Houston, TX 77030, USA., Perumal TM; Sage Bionetworks, Seattle, WA 98121, USA., Lee TV; Jan and Dan Duncan Neurologic Research Institute, Texas Children's Hospital, Houston, TX 77030, USA; Department of Neurology, Baylor College of Medicine, Houston, TX 77030, USA., Allison K; Jan and Dan Duncan Neurologic Research Institute, Texas Children's Hospital, Houston, TX 77030, USA; Department of Neurology, Baylor College of Medicine, Houston, TX 77030, USA., Swarup V; Department of Neurobiology and Behavior, University of California, Irvine, CA 92697, USA., Funk CC; Institute for Systems Biology, Seattle, WA 98109, USA., Gaiteri C; Rush Alzheimer's Disease Center, Rush University Medical Center, Chicago, IL, USA., Allen M; Mayo Clinic, Department of Neuroscience, Jacksonville, FL 32224, USA., Wang M; Department of Genetics and Genomic Sciences, Mount Sinai Center for Transformative Disease Modeling, Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, New York, NY 10029, USA., Neuner SM; The Jackson Laboratory, Bar Harbor, ME 04609, USA., Kaczorowski CC; The Jackson Laboratory, Bar Harbor, ME 04609, USA., Philip VM; The Jackson Laboratory, Bar Harbor, ME 04609, USA., Howell GR; The Jackson Laboratory, Bar Harbor, ME 04609, USA., Martini-Stoica H; Huffington Center on Aging, Baylor College of Medicine, Houston, TX 77030, USA., Zheng H; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Huffington Center on Aging, Baylor College of Medicine, Houston, TX 77030, USA., Mei H; Neuroscience DPU, Shanghai R&D, GlaxoSmithKline, Shanghai, China., Zhong X; Neuroscience DPU, Shanghai R&D, GlaxoSmithKline, Shanghai, China., Kim JW; Neuroregeneration and Stem Cell Programs, Institute for Cell Engineering, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; Department of Physiology, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA., Dawson VL; Neuroregeneration and Stem Cell Programs, Institute for Cell Engineering, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; Department of Physiology, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; Solomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; Adrienne Helis Malvin & Diana Helis Henry Medical Research Foundations, New Orleans, LA 70130, USA; Department of Neurology, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA., Dawson TM; Neuroregeneration and Stem Cell Programs, Institute for Cell Engineering, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; Solomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; Adrienne Helis Malvin & Diana Helis Henry Medical Research Foundations, New Orleans, LA 70130, USA; Department of Pharmacology and Molecular Sciences, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; Department of Neurology, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA., Pao PC; The Picower Institute for Learning and Memory, Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Broad Institute of Harvard University and the Massachusetts Institute of Technology, Cambridge, MA 02139, USA., Tsai LH; The Picower Institute for Learning and Memory, Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Broad Institute of Harvard University and the Massachusetts Institute of Technology, Cambridge, MA 02139, USA., Haure-Mirande JV; Departments of Neurology and Pediatrics, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, New York, NY 10029, USA., Ehrlich ME; Department of Genetics and Genomic Sciences, Mount Sinai Center for Transformative Disease Modeling, Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, New York, NY 10029, USA; Departments of Neurology and Pediatrics, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, New York, NY 10029, USA., Chakrabarty P; Evelyn F. and William L. McKnight Brain Institute, Center for Translational Research in Neurodegenerative Disease, Department of Neuroscience, University of Florida, Gainesville, FL 32610, USA., Levites Y; Evelyn F. and William L. McKnight Brain Institute, Center for Translational Research in Neurodegenerative Disease, Department of Neuroscience, University of Florida, Gainesville, FL 32610, USA., Wang X; Mayo Clinic, Department of Neuroscience, Jacksonville, FL 32224, USA; Mayo Clinic, Department of Health Sciences Research, Jacksonville, FL 32224, USA., Dammer EB; Department of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322, USA., Srivastava G; Data & Statistical Sciences, AbbVie, Cambridge, MA, USA., Mukherjee S; Sage Bionetworks, Seattle, WA 98121, USA., Sieberts SK; Sage Bionetworks, Seattle, WA 98121, USA., Omberg L; Sage Bionetworks, Seattle, WA 98121, USA., Dang KD; Sage Bionetworks, Seattle, WA 98121, USA., Eddy JA; Sage Bionetworks, Seattle, WA 98121, USA., Snyder P; Sage Bionetworks, Seattle, WA 98121, USA., Chae Y; Sage Bionetworks, Seattle, WA 98121, USA., Amberkar S; Sheffield Institute of Translational Neuroscience, University of Sheffield, Sheffield, S10 2HQ, UK; Molecular Oncology Lab, Cancer Research UK - Manchester Institute, The University of Manchester, Manchester, SK10 4TG, UK., Wei W; Sheffield Institute of Translational Neuroscience, University of Sheffield, Sheffield, S10 2HQ, UK; Department of Biosciences, Durham University, Durham, DH1 3LE, UK., Hide W; Sheffield Institute of Translational Neuroscience, University of Sheffield, Sheffield, S10 2HQ, UK; Beth Israel Deaconess Medical Center and Harvard Medical School, Boston, MA, USA., Preuss C; The Jackson Laboratory, Bar Harbor, ME 04609, USA., Ergun A; Translational Genome Sciences, Biogen, Cambridge, MA, USA., Ebert PJ; Eli Lilly & Company, Lilly Corporate Center, Indianapolis, IN 46285, USA., Airey DC; Eli Lilly & Company, Lilly Corporate Center, Indianapolis, IN 46285, USA., Mostafavi S; University of British Columbia, Vancouver, BC, Canada., Yu L; Rush Alzheimer's Disease Center, Rush University Medical Center, Chicago, IL, USA., Klein HU; Center for Translational & Computational Neuroimmunology, Department of Neurology and Taub Institute for the Study of Alzheimer's Disease and the Aging Brain, Columbia University Irving Medical Center, New York, NY 10032, USA; Cell Circuits Program, Broad Institute, Cambridge, MA 02142, USA., Carter GW; The Jackson Laboratory, Bar Harbor, ME 04609, USA., Collier DA; Eli Lilly & Company, Erl Wood Manor, Sunninghill Road, Windlesham, Surrey, GU20 6PH, UK., Golde TE; Evelyn F. and William L. McKnight Brain Institute, Center for Translational Research in Neurodegenerative Disease, Department of Neuroscience, University of Florida, Gainesville, FL 32610, USA., Levey AI; Department of Neurology, Emory University School of Medicine, Atlanta, GA 30322, USA., Bennett DA; Rush Alzheimer's Disease Center, Rush University Medical Center, Chicago, IL, USA., Estrada K; Translational Genome Sciences, Biogen, Cambridge, MA, USA., Townsend TM; Foundation Neuroscience Center, AbbVie, Cambridge, MA, USA., Zhang B; Department of Genetics and Genomic Sciences, Mount Sinai Center for Transformative Disease Modeling, Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, New York, NY 10029, USA., Schadt E; Department of Genetics and Genomic Sciences, Mount Sinai Center for Transformative Disease Modeling, Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, New York, NY 10029, USA., De Jager PL; Center for Translational & Computational Neuroimmunology, Department of Neurology and Taub Institute for the Study of Alzheimer's Disease and the Aging Brain, Columbia University Irving Medical Center, New York, NY 10032, USA; Cell Circuits Program, Broad Institute, Cambridge, MA 02142, USA., Price ND; Institute for Systems Biology, Seattle, WA 98109, USA., Ertekin-Taner N; Mayo Clinic, Department of Neuroscience, Jacksonville, FL 32224, USA; Mayo Clinic, Department of Neurology, Jacksonville, FL 32224, USA., Liu Z; Jan and Dan Duncan Neurologic Research Institute, Texas Children's Hospital, Houston, TX 77030, USA; Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA. Electronic address: zhandonl@bcm.edu., Shulman JM; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Jan and Dan Duncan Neurologic Research Institute, Texas Children's Hospital, Houston, TX 77030, USA; Department of Neurology, Baylor College of Medicine, Houston, TX 77030, USA; Huffington Center on Aging, Baylor College of Medicine, Houston, TX 77030, USA; Department of Neuroscience, Baylor College of Medicine, Houston, TX 77030, USA. Electronic address: joshua.shulman@bcm.edu., Mangravite LM; Sage Bionetworks, Seattle, WA 98121, USA. Electronic address: lara.mangravite@sagebionetworks.org., Logsdon BA; Sage Bionetworks, Seattle, WA 98121, USA. Electronic address: ben.logsdon@sagebionetworks.org.

Publikováno v: Cell reports [Cell Rep] 2020 Jul 14; Vol. 32 (2), pp. 107908.

Integrated analyses resolve conflicts over squamate reptile phylogeny and reveal unexpected placements for fossil taxa.

Autor: Reeder TW; Department of Biology, San Diego State University, San Diego, California, 92182, United States of America., Townsend TM; Department of Biology, San Diego State University, San Diego, California, 92182, United States of America., Mulcahy DG; Laboratories of Analytical Biology, Smithsonian Institution, 10th & Constitution Aves. NW, Washington, D.C., 20560, United States of America., Noonan BP; Department of Biology, University of Mississippi, Box 1848, Mississippi, 38677, United States of America., Wood PL Jr; Department of Biology and Bean Life Science Museum, Brigham Young University, Provo, Utah, 84602, United States of America., Sites JW Jr; Department of Biology and Bean Life Science Museum, Brigham Young University, Provo, Utah, 84602, United States of America., Wiens JJ; Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, Arizona, 85721, United States of America.

Publikováno v: PloS one [PLoS One] 2015 Mar 24; Vol. 10 (3), pp. e0118199. Date of Electronic Publication: 2015 Mar 24 (Print Publication: 2015).

Resolving the phylogeny of lizards and snakes (Squamata) with extensive sampling of genes and species.

Autor: Wiens JJ; Department of Ecology and Evolution, Stony Brook University, Stony Brook, NY 11794-5245, USA. wiensj@life.bio.sunysb.edu, Hutter CR, Mulcahy DG, Noonan BP, Townsend TM, Sites JW Jr, Reeder TW

Publikováno v: Biology letters [Biol Lett] 2012 Dec 23; Vol. 8 (6), pp. 1043-6. Date of Electronic Publication: 2012 Sep 19.