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pro vyhledávání: '"Toups, Haley S."'
Autor:
Bonarota, Maria-Sole, Toups, Haley S., Bristow, Steven T., Santos, Patricia, Jackson, Louise E., Cramer, Grant R., Barrios-Masias, Felipe H.
Publikováno v:
In Plant Stress March 2024 11
Autor:
Toups, Haley S.1 (AUTHOR), Cochetel, Noé1 (AUTHOR), Gray, Dennis2 (AUTHOR), Cramer, Grant R.1 (AUTHOR) cramer@unr.edu
Publikováno v:
BMC Genomics. 7/9/2020, Vol. 21 Issue 1, p1-27. 27p. 5 Diagrams, 1 Chart, 7 Graphs.
Akademický článek
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Additional file 30. Venn diagram of gene co-expression analysis. Co-expression analysis was performed on the 18-member VviERF6L clade in the five data series reanalyzed with the PN40024 V3 annotation. Number of genes sharing expression patterns for d
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b0d19ae8ad425193690c40eeef7f6ac4
Additional file 23. The number of differential expression analysis (DEA) contrasts of interest (COI) in which a VviERF6L was a differentially expressed gene (DEG) in PRJNA516950. VviERF6Ls are ordered from highest to lowest number of COI in which a V
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6154293841490c7a98aa0e9ccf5c4502
Additional file 12. Maximum likelihood phylogenetic tree of PN40024 V2 assembly V3 structural annotation, CS, CH, and CA VviERF6L and all PN40024 VviERF proteins. Maximum likelihood method and Jones-Taylor-Thornton matrix-based model; Bootstrap conse
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5cb6482ae28b341adcb0a34a90cea5a0
Additional file 7. Cabernet Sauvignon (CS) VviERF6L protein motif logos. Protein motif logos of CS VviERF6Ls determined by MEME. X-axis represents relative residue position in motif. Y-axis letter height (bits) indicates relative frequency of a resid
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::34735a0444a3f5db31f1dd3d5843ac30
Additional file 5. The number of ERF6L paralogs across species. The number of ERF6Ls in species (carrot (D. carota), soybean (G. max), tomato (S. lycopersicum), and potato (S. tuberosum)) identified being closely related to VviERF6L1 from the Pantaxo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::27550549829a507dd7d37d12e6fad59a
Additional file 9. CS VviERF6L protein motifs. Relative position of protein motifs from N-terminus (bottom) to C-terminus (top) of CS VviERF6Ls determined by MEME. Motif number based on E-value and sequence from Additional File 2 represented by color
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d4dacaeea30dc36a82cfd25a1cf6cc40
Additional file 6. Cabernet Sauvignon (CS) VviERF6L protein motif presence and abundance. The frequency of the 13 highly conserved amino acid motifs (right) in the 26 translated CS VviERF6L genes (bottom). Exact motif coordinates are in Additional Fi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4943883ca1f735b77b65daa6aa515f4d