Global genomic analyses of wheat powdery mildew reveal association of pathogen spread with historical human migration and trade

Autor: Alexandros G. Sotiropoulos, Epifanía Arango-Isaza, Tomohiro Ban, Chiara Barbieri, Salim Bourras, Christina Cowger, Paweł C. Czembor, Roi Ben-David, Amos Dinoor, Simon R. Ellwood, Johannes Graf, Koichi Hatta, Marcelo Helguera, Javier Sánchez-Martín, Bruce A. McDonald, Alexey I. Morgounov, Marion C. Müller, Vladimir Shamanin, Kentaro K. Shimizu, Taiki Yoshihira, Helen Zbinden, Beat Keller, Thomas Wicker

Publikováno v: Nature Communications, Vol 13, Iss 1, Pp 1-14 (2022)

The fungus Blumeria graminis f. sp. tritici causes wheat powdery mildew disease. Here, Sotiropoulos et al. analyze a global sample of 172 mildew genomes, providing evidence that humans drove global spread of the pathogen throughout history and that m

Externí odkaz: https://doaj.org/article/84539d35a7e04a48871c80faa9ecb979

NRLMFβ: Beta-distribution-rescored neighborhood regularized logistic matrix factorization for improving the performance of drug–target interaction prediction

Autor: Tomohiro Ban, Masahito Ohue, Yutaka Akiyama

Publikováno v: Biochemistry and Biophysics Reports, Vol 18, Iss , Pp - (2019)

Techniques for predicting interactions between a drug and a target (protein) are useful for strategic drug repositioning. Neighborhood regularized logistic matrix factorization (NRLMF) is one of the state-of-the-art drug–target interaction predicti

Externí odkaz: https://doaj.org/article/d85ff7746a3147c68c54482925c60142

Genetic Nature of Elemental Contents in Wheat Grains and Its Genomic Prediction: Toward the Effective Use of Wheat Landraces from Afghanistan.

Autor: Alagu Manickavelu, Tomohiro Hattori, Shuhei Yamaoka, Kazusa Yoshimura, Youichi Kondou, Akio Onogi, Minami Matsui, Hiroyoshi Iwata, Tomohiro Ban

Publikováno v: PLoS ONE, Vol 12, Iss 1, p e0169416 (2017)

Profiling elemental contents in wheat grains and clarifying the underlying genetic systems are important for the breeding of biofortified crops. Our objective was to evaluate the genetic potential of 269 Afghan wheat landraces for increasing elementa

Externí odkaz: https://doaj.org/article/95af26f7668d4955a67bc0199b800542

Multiple wheat genomes reveal global variation in modern breeding

Autor: Gonzalo Garcia Accinelli, Simon G. Krattinger, Luca Venturini, Fuminori Kobayashi, Allen K. Fritz, Emily Delorean, Hikmet Budak, Gabriel Keeble-Gagnère, Keith A. Gardner, Valentyna Klymiuk, Pierre Hucl, Ksenia V. Krasileva, Kanako Kawaura, Jianzhong Wu, Neil McKenzie, Bernardo J. Clavijo, Kirby T. Nilsen, Heidrun Gundlach, Sateesh Kagale, Sylvie Cloutier, Cristobal Uauy, Manuel Spannagl, Masaomi Hatakeyama, Juan J. Gutierrez-Gonzalez, Anne Fiebig, Tony Kuo, Erik Legg, Gwyneth Halstead-Nussloch, Michael W. Bevan, Jonathan M. Wright, Jennifer Ens, David Swarbreck, Jasline Deek, Jemima Brinton, Sudharsan Padmarasu, Venkat Bandi, Christine Fosker, Hiroyuki Kanamori, Josquin Tibbets, Nils Stein, James Cockram, Rie Shimizu-Inatsugi, Anthony Hall, Philomin Juliana, Curtis J. Pozniak, Yusuke Nabeka, Beat Keller, Timothy Paape, Sean Walkowiak, Pierre R. Fobert, Lawrence Percival-Alwyn, Curt A. McCartney, Gary J. Muehlbauer, Kenneth J. Chalmers, Shuhei Nasuda, Burkhard Steuernagel, Dinushika Thambugala, Ricardo H. Ramirez-Gonzalez, Krystalee Wiebe, Ian Small, Klaus F. X. Mayer, Toshiaki Tameshige, Cécile Monat, Darren Heavens, Jun Sese, Andrew G. Sharpe, Ravi P. Singh, Matthew D. Clark, Alejandro C. Costamagna, Axel Himmelbach, Hirokazu Handa, Mulualem T. Kassa, Carl Gutwin, Bin Xiao Fu, Catharine Aquino, Uwe Scholz, Georg Haberer, Tomohiro Ban, Joanna Melonek, Amidou N’Diaye, Dario Copetti, Kazuki Murata, Assaf Distelfeld, Liangliang Gao, Nick Fradgley, Markus C. Kolodziej, Jorge Nunez Siri, Arvind K. Bharti, Thomas Wicker, Brook Byrns, Dal-Hoe Koo, Tsuyoshi Tanaka, Hiroyuki Tsuji, Peter Langridge, Chu Shin Koh, Kentaro Shimizu, Jesse Poland, Martin Mascher

Publikováno v: Nature
Nature, vol 588, iss 7837

Advances in genomics have expedited the improvement of several agriculturally important crops but similar efforts in wheat (Triticum spp.) have been more challenging. This is largely owing to the size and complexity of the wheat genome1, and the lack

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3253b3a6d2673fc15aed4823ff1e636f
http://hdl.handle.net/2433/259345

Can biological nitrification inhibition (BNI) genes from perennial Leymus racemosus (Triticeae) combat nitrification in wheat farming?

Autor: Subbarao, G. V., Tomohiro, Ban, Masahiro, Kishii, Osamu, Ito, Samejima, H., Wang, H. Y., Pearse, S. J., Gopalakrishnan, S., Nakahara, K., Hossain, A. K. M. Zakir, Tsujimoto, H., Berry, W. L.

Publikováno v: Plant and Soil, 2007 Oct 01. 299(1/2), 55-64.

Externí odkaz: https://www.jstor.org/stable/24127948