Zobrazeno 1 - 10
of 88
pro vyhledávání: '"Tomislav Šmuc"'
Publikováno v:
Scientific Reports, Vol 11, Iss 1, Pp 1-12 (2021)
Abstract Widespread use of herbicides results in the global increase in weed resistance. The rotational use of herbicides according to their modes of action (MoAs) and discovery of novel phytotoxic molecules are the two strategies used against the we
Externí odkaz:
https://doaj.org/article/3ce6d67198584709bdb4bef84fa4059e
Autor:
Naihui Zhou, Yuxiang Jiang, Timothy R. Bergquist, Alexandra J. Lee, Balint Z. Kacsoh, Alex W. Crocker, Kimberley A. Lewis, George Georghiou, Huy N. Nguyen, Md Nafiz Hamid, Larry Davis, Tunca Dogan, Volkan Atalay, Ahmet S. Rifaioglu, Alperen Dalkıran, Rengul Cetin Atalay, Chengxin Zhang, Rebecca L. Hurto, Peter L. Freddolino, Yang Zhang, Prajwal Bhat, Fran Supek, José M. Fernández, Branislava Gemovic, Vladimir R. Perovic, Radoslav S. Davidović, Neven Sumonja, Nevena Veljkovic, Ehsaneddin Asgari, Mohammad R.K. Mofrad, Giuseppe Profiti, Castrense Savojardo, Pier Luigi Martelli, Rita Casadio, Florian Boecker, Heiko Schoof, Indika Kahanda, Natalie Thurlby, Alice C. McHardy, Alexandre Renaux, Rabie Saidi, Julian Gough, Alex A. Freitas, Magdalena Antczak, Fabio Fabris, Mark N. Wass, Jie Hou, Jianlin Cheng, Zheng Wang, Alfonso E. Romero, Alberto Paccanaro, Haixuan Yang, Tatyana Goldberg, Chenguang Zhao, Liisa Holm, Petri Törönen, Alan J. Medlar, Elaine Zosa, Itamar Borukhov, Ilya Novikov, Angela Wilkins, Olivier Lichtarge, Po-Han Chi, Wei-Cheng Tseng, Michal Linial, Peter W. Rose, Christophe Dessimoz, Vedrana Vidulin, Saso Dzeroski, Ian Sillitoe, Sayoni Das, Jonathan Gill Lees, David T. Jones, Cen Wan, Domenico Cozzetto, Rui Fa, Mateo Torres, Alex Warwick Vesztrocy, Jose Manuel Rodriguez, Michael L. Tress, Marco Frasca, Marco Notaro, Giuliano Grossi, Alessandro Petrini, Matteo Re, Giorgio Valentini, Marco Mesiti, Daniel B. Roche, Jonas Reeb, David W. Ritchie, Sabeur Aridhi, Seyed Ziaeddin Alborzi, Marie-Dominique Devignes, Da Chen Emily Koo, Richard Bonneau, Vladimir Gligorijević, Meet Barot, Hai Fang, Stefano Toppo, Enrico Lavezzo, Marco Falda, Michele Berselli, Silvio C.E. Tosatto, Marco Carraro, Damiano Piovesan, Hafeez Ur Rehman, Qizhong Mao, Shanshan Zhang, Slobodan Vucetic, Gage S. Black, Dane Jo, Erica Suh, Jonathan B. Dayton, Dallas J. Larsen, Ashton R. Omdahl, Liam J. McGuffin, Danielle A. Brackenridge, Patricia C. Babbitt, Jeffrey M. Yunes, Paolo Fontana, Feng Zhang, Shanfeng Zhu, Ronghui You, Zihan Zhang, Suyang Dai, Shuwei Yao, Weidong Tian, Renzhi Cao, Caleb Chandler, Miguel Amezola, Devon Johnson, Jia-Ming Chang, Wen-Hung Liao, Yi-Wei Liu, Stefano Pascarelli, Yotam Frank, Robert Hoehndorf, Maxat Kulmanov, Imane Boudellioua, Gianfranco Politano, Stefano Di Carlo, Alfredo Benso, Kai Hakala, Filip Ginter, Farrokh Mehryary, Suwisa Kaewphan, Jari Björne, Hans Moen, Martti E.E. Tolvanen, Tapio Salakoski, Daisuke Kihara, Aashish Jain, Tomislav Šmuc, Adrian Altenhoff, Asa Ben-Hur, Burkhard Rost, Steven E. Brenner, Christine A. Orengo, Constance J. Jeffery, Giovanni Bosco, Deborah A. Hogan, Maria J. Martin, Claire O’Donovan, Sean D. Mooney, Casey S. Greene, Predrag Radivojac, Iddo Friedberg
Publikováno v:
Genome Biology, Vol 20, Iss 1, Pp 1-23 (2019)
Abstract Background The Critical Assessment of Functional Annotation (CAFA) is an ongoing, global, community-driven effort to evaluate and improve the computational annotation of protein function. Results Here, we report on the results of the third C
Externí odkaz:
https://doaj.org/article/4c2b017b155b41ceab8d6d078186cafa
Publikováno v:
Microbiome, Vol 6, Iss 1, Pp 1-21 (2018)
Abstract Background The function of many genes is still not known even in model organisms. An increasing availability of microbiome DNA sequencing data provides an opportunity to infer gene function in a systematic manner. Results We evaluated if the
Externí odkaz:
https://doaj.org/article/dc6b8206fd56488b9661229194725db1
Autor:
Dario Matulja, Petra Grbčić, Krunoslav Bojanić, Natalija Topić-Popović, Rozelindra Čož-Rakovac, Sylvain Laclef, Tomislav Šmuc, Ozren Jović, Dean Marković, Sandra Kraljević Pavelić
Publikováno v:
Molecules, Vol 26, Iss 19, p 5751 (2021)
Due to sedentary lifestyle and harsh environmental conditions, gorgonian coral extracts are recognized as a rich source of novel compounds with various biological activities, of interest to the pharmaceutical and cosmetic industries. The presented st
Externí odkaz:
https://doaj.org/article/b9fa8d0eb8af4263ad38cac1cbbb0aec
Autor:
Ozren Jović, Tomislav Šmuc
Publikováno v:
Molecules, Vol 26, Iss 14, p 4323 (2021)
In this work we introduce a novel filtering and molecular modeling pipeline based on a fingerprint and descriptor similarity procedure, coupled with molecular docking and molecular dynamics (MD), to select potential novel quoinone outside inhibitors
Externí odkaz:
https://doaj.org/article/4ce34ef885b44617a99fea75a47e286c
Autor:
Josipa Vlainić, Ozren Jović, Ivan Kosalec, Oliver Vugrek, Rozelindra Čož-Rakovac, Tomislav Šmuc
Publikováno v:
Molecules, Vol 26, Iss 12, p 3504 (2021)
The limited number of medicinal products available to treat of fungal infections makes control of fungal pathogens problematic, especially since the number of fungal resistance incidents increases. Given the high costs and slow development of new ant
Externí odkaz:
https://doaj.org/article/79e403e71abc4a818a2db42050687a9f
Publikováno v:
PLoS ONE, Vol 14, Iss 7, p e0219004 (2019)
Recent research in machine learning pointed to the core problem of state-of-the-art models which impedes their widespread adoption in different domains. The models' inability to differentiate between noise and subtle, yet significant variation in dat
Externí odkaz:
https://doaj.org/article/a3566176374e45469e7adebe65a8df8a
Publikováno v:
Entropy, Vol 22, Iss 8, p 906 (2020)
Machines usually employ a guess-and-check strategy to analyze data: they take the data, make a guess, check the answer, adjust it with regard to the correct one if necessary, and try again on a new data set. An active learning environment guarantees
Externí odkaz:
https://doaj.org/article/fce34e0862aa46b192b289912828f247
Autor:
Ozren Jović, Tomislav Šmuc
Publikováno v:
Molecules, Vol 25, Iss 9, p 2198 (2020)
Novel machine learning and molecular modelling filtering procedures for drug repurposing have been carried out for the recognition of the novel fungicide targets of Cyp51 and Erg2. Classification and regression approaches on molecular descriptors hav
Externí odkaz:
https://doaj.org/article/71936698d0b74d409975281cb71efa9a
Autor:
Matej Mihelčić, Goran Šimić, Mirjana Babić Leko, Nada Lavrač, Sašo Džeroski, Tomislav Šmuc, Alzheimer’s Disease Neuroimaging Initiative
Publikováno v:
PLoS ONE, Vol 12, Iss 10, p e0187364 (2017)
Based on a set of subjects and a collection of attributes obtained from the Alzheimer's Disease Neuroimaging Initiative database, we used redescription mining to find interpretable rules revealing associations between those determinants that provide
Externí odkaz:
https://doaj.org/article/13840de178d04508a5f586d8b7095a0f