Characterisation of QTL-linked and genome-wide restriction site-associated DNA (RAD) markers in farmed Atlantic salmon

Autor: Houston Ross D, Davey John W, Bishop Stephen C, Lowe Natalie R, Mota-Velasco Jose C, Hamilton Alastair, Guy Derrick R, Tinch Alan E, Thomson Marian L, Blaxter Mark L, Gharbi Karim, Bron James E, Taggart John B

Publikováno v: BMC Genomics, Vol 13, Iss 1, p 244 (2012)

Abstract Background Restriction site-associated DNA sequencing (RAD-Seq) is a genome complexity reduction technique that facilitates large-scale marker discovery and genotyping by sequencing. Recent applications of RAD-Seq have included linkage and Q

Externí odkaz: https://doaj.org/article/8764d138ef8b403185d99f1afe069ce4

Genotype Imputation to Improve the Cost-Efficiency of Genomic Selection in Farmed Atlantic Salmon

Autor: Tsai, Hsin Y, Matika, Oswald, Edwards, Stefan McKinnon, Antolin-Sanchez, Roberto, Hamilton, Alastair, Guy, Derrick R, Tinch, Alan E, Gharbi, Karim, Stear, Michael, Taggart, John, Bron, James, Hickey, John M, Houston, Ross D

Publikováno v: Tsai, H-Y, Matika, O, Hoj-Edwards, S, Antolin, R, Hamilton, A, Guy, D R, Tinch, A E, Gharbi, K, Stear, M J, Taggart, J B, Bron, J E, Hickey, J M & Houston, R D 2017, ' Genotype Imputation to Improve the Cost-Efficiency of Genomic Selection in Farmed Atlantic Salmon ', G3: Genes | Genomes | Genetics, vol. 7, no. 4, pp. 1377-1383 . https://doi.org/10.1534/g3.117.040717
G3: Genes|Genomes|Genetics
G3: Genes, Genomes, Genetics, Vol 7, Iss 4, Pp 1377-1383 (2017)

Genomic selection uses genome-wide marker information to predict breeding values for traits of economic interest, and is more accurate than pedigree-based methods. The development of high density SNP arrays for Atlantic salmon has enabled genomic sel

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1d2842866144f359ec1e90569913fb33
https://www.pure.ed.ac.uk/ws/files/34167473/1377.full.pdf

Gene expression comparison of resistant and susceptible Atlantic salmon fry challenged with Infectious Pancreatic Necrosis virus reveals a marked contrast in immune response

Autor: Robledo, Diego, Taggart, John, Ireland, Jacqueline, McAndrew, Brendan, Starkey, William, Haley, Chris S, Hamilton, Alastair, Guy, Derrick R, Mota-Velasco, Jose C, Gheyas, Almas A, Tinch, Alan E, Verner-Jeffreys, David W, Paley, Richard K, Rimmer, Georgina S E, Tew, Ian J, Bishop, Stephen C, Bron, James, Houston, Ross D

Publikováno v: Minerva. Repositorio Institucional de la Universidad de Santiago de Compostela
instname
Robledo, D, Taggart, J B, Ireland, J H, Mcandrew, B J, Starkey, W G, Haley, C S, Hamilton, A, Guy, D R, Mota-velasco, J C, Gheyas, A A, Tinch, A E, Verner-jeffreys, D W, Paley, R K, Rimmer, G S E, Tew, I J, Bishop, S C, Bron, J E & Houston, R D 2016, ' Gene expression comparison of resistant and susceptible Atlantic salmon fry challenged with Infectious Pancreatic Necrosis virus reveals a marked contrast in immune response ', BMC Genomics, vol. 17, no. 1, 279 . https://doi.org/10.1186/s12864-016-2600-y

Background Infectious Pancreatic Necrosis (IPN) is a highly contagious birnavirus disease of farmed salmonid fish, which often causes high levels of morbidity and mortality. A large host genetic component to resistance has been previously described f

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::6e85156fdf038d7cb7a03cd895c3283a

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