Zobrazeno 1 - 10
of 31
pro vyhledávání: '"Timothee Cezard"'
Autor:
Baron Koylass, Richard Finkers, Cyril Pommier, Guy Naamati, Timothee Cezard, Bruno Contreras-Moreira, Isuru Liyanage, Anne Fiebig, Stephan Weise, Paul J. Kersey, Sebastian Beier, Uwe Scholz, Matthias Lange, Mélanie Courtot, Sarah Dyer
Publikováno v:
F1000Research, Vol 11 (2022)
In this opinion article, we discuss the formatting of files from (plant) genotyping studies, in particular the formatting of metadata in Variant Call Format (VCF) files. The flexibility of the VCF format specification facilitates its use as a generic
Externí odkaz:
https://doaj.org/article/cc87b8bf1c5e411fa65c2623879b4760
Autor:
Sonia Pascoal, Judith E. Risse, Xiao Zhang, Mark Blaxter, Timothee Cezard, Richard J. Challis, Karim Gharbi, John Hunt, Sujai Kumar, Emma Langan, Xuan Liu, Jack G. Rayner, Michael G. Ritchie, Basten L. Snoek, Urmi Trivedi, Nathan W. Bailey
Publikováno v:
Evolution Letters, Vol 4, Iss 1, Pp 19-33 (2020)
Abstract Evolutionary adaptation is generally thought to occur through incremental mutational steps, but large mutational leaps can occur during its early stages. These are challenging to study in nature due to the difficulty of observing new genetic
Externí odkaz:
https://doaj.org/article/195f5b157407430f9140b6a31bb60cb8
Autor:
Marco A. Marra, David R. Kaplan, Michael F. Moran, Thomas Kislinger, Jason Moffat, Steven Jones, Yongjun Zhao, Richard Varhol, Nina Thiessen, Paul Taylor, Freda Miller, Kristen M. Smith, Richard Moore, Ryan D. Morin, Timothee Cezard, Martin Hirst, Alexandra Maslova, Kim M. Blakely, Loen M. Hansford, Natalie Grinshtein, Milijana Vojvodic, Olena Morozova
Purpose: Neuroblastoma (NB) is an aggressive tumor of the developing peripheral nervous system that remains difficult to cure in the advanced stages. The poor prognosis for high-risk NB patients is associated with common disease recurrences that fail
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1b19736036971ec643ef805bb9af871f
https://doi.org/10.1158/1078-0432.c.6518082.v1
https://doi.org/10.1158/1078-0432.c.6518082.v1
Autor:
Marco A. Marra, David R. Kaplan, Michael F. Moran, Thomas Kislinger, Jason Moffat, Steven Jones, Yongjun Zhao, Richard Varhol, Nina Thiessen, Paul Taylor, Freda Miller, Kristen M. Smith, Richard Moore, Ryan D. Morin, Timothee Cezard, Martin Hirst, Alexandra Maslova, Kim M. Blakely, Loen M. Hansford, Natalie Grinshtein, Milijana Vojvodic, Olena Morozova
Supplementary Table S3.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0a1386b007ad69eeadbab2f7a7ddfb84
https://doi.org/10.1158/1078-0432.22440807.v1
https://doi.org/10.1158/1078-0432.22440807.v1
Autor:
Marco A. Marra, David R. Kaplan, Michael F. Moran, Thomas Kislinger, Jason Moffat, Steven Jones, Yongjun Zhao, Richard Varhol, Nina Thiessen, Paul Taylor, Freda Miller, Kristen M. Smith, Richard Moore, Ryan D. Morin, Timothee Cezard, Martin Hirst, Alexandra Maslova, Kim M. Blakely, Loen M. Hansford, Natalie Grinshtein, Milijana Vojvodic, Olena Morozova
Supplementary Figures S1-S2.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::022d1eba9eb5b49718a2dcfd4204743e
https://doi.org/10.1158/1078-0432.22440816
https://doi.org/10.1158/1078-0432.22440816
Autor:
Taisen Iguchi, Charles R. Tyler, David J. Studholme, Anke Lange, Karim Gharbi, Shinichi Miyagawa, Josephine R. Paris, Timothee Cezard
Publikováno v:
Molecular Ecology Resources. 20:1007-1022
Oestrogenic wastewater treatment works (WwTW) effluents discharged into UK rivers have been shown to affect sexual development, including inducing intersex, in wild roach (Rutilus rutilus). This can result in a reduced breeding capability with potent
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c5c0985569f300695951a0b1dbcd0e7c
https://doi.org/10.1111/1755-0998.13166
https://doi.org/10.1111/1755-0998.13166
Autor:
Nathan W. Bailey, Richard Challis, Judith Risse, Michael G. Ritchie, Basten L. Snoek, Sonia Pascoal, Xiao Zhang, Karim Gharbi, Timothee Cezard, Mark Blaxter, Emma Langan, Urmi Trivedi, Jack G. Rayner, Sujai Kumar, John Hunt, Xuan Liu
Publikováno v:
Evolution Letters, Vol 4, Iss 1, Pp 19-33 (2020)
Evolution Letters, 4(1), 19-33
Evolution Letters, 4(1), 19. Wiley-Blackwell Publishing Ltd
Pascoal, S, Risse, J E, Zhang, X, Blaxter, M, Cezard, T, Challis, R J, Gharbi, K, Hunt, J, Kumar, S, Langan, E, Liu, X, Rayner, J G, Ritchie, M G, Snoek, B L, Trivedi, U & Bailey, N W 2019, ' Field cricket genome reveals the footprint of recent, abrupt adaptation in the wild ', Evolution Letters . https://doi.org/10.1002/evl3.148
Evolution Letters, Online, 19-33. John Wiley and Sons Ltd
Evolution Letters
Evolution Letters 4 (2020) 1
Evolution Letters, 4(1), 19-33
Evolution Letters, 4(1), 19. Wiley-Blackwell Publishing Ltd
Pascoal, S, Risse, J E, Zhang, X, Blaxter, M, Cezard, T, Challis, R J, Gharbi, K, Hunt, J, Kumar, S, Langan, E, Liu, X, Rayner, J G, Ritchie, M G, Snoek, B L, Trivedi, U & Bailey, N W 2019, ' Field cricket genome reveals the footprint of recent, abrupt adaptation in the wild ', Evolution Letters . https://doi.org/10.1002/evl3.148
Evolution Letters, Online, 19-33. John Wiley and Sons Ltd
Evolution Letters
Evolution Letters 4 (2020) 1
The Natural Environment Research Council provided funding to N.W.B. (NE/G014906/1, NE/L011255/1) and to N.W.B. and M.G.R. (NE/1027800/1). Sequencing was provided by Edinburgh Genomics and the Centre for Genomic Research (University of Liverpool). Bio
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ab38e00751149a3a5246d78071cd74ce
https://doi.org/10.1002/evl3.148
https://doi.org/10.1002/evl3.148
Autor:
Sebastian Beier, Anne Fiebig, Cyril Pommier, Isuru Liyanage, Matthias Lange, Paul J. Kersey, Stephan Weise, Richard Finkers, Baron Koylass, Timothee Cezard, Mélanie Courtot, Bruno Contreras-Moreira, Guy Naamati, Sarah Dyer, Uwe Scholz
Publikováno v:
F1000Research 11 (2022)
F1000Research 11, 231-(2022). doi:10.12688/f1000research.109080.2
F1000Research, 11
F1000Research 11, 231-(2022). doi:10.12688/f1000research.109080.2
F1000Research, 11
In this opinion article, we discuss the formatting of files from (plant) genotyping studies, in particular the formatting of metadata in Variant Call Format (VCF) files. The flexibility of the VCF format specification facilitates its use as a generic
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5500ba52295a8c1663cf54603dfdf3e8
https://research.wur.nl/en/publications/recommendations-for-the-formatting-of-variant-call-format-vcf-fil
https://research.wur.nl/en/publications/recommendations-for-the-formatting-of-variant-call-format-vcf-fil
Autor:
Timothee Cezard, Michael G. Ritchie, Judith Risse, Sonia Pascoal, Peter Moran, Nathan W. Bailey
Publikováno v:
Molecular Ecology 27 (2018) 19
Molecular Ecology, 27(19), 3905-3924
Moran, P A, Pascoal, S, Cezard, T, Risse, J E, Ritchie, M G & Bailey, N W 2018, ' Opposing patterns of intraspecific and interspecific differentiation in sex chromosomes and autosomes ', Molecular Ecology . https://doi.org/10.1111/mec.14725
Molecular Ecology, 27(19), 3905-3924
Moran, P A, Pascoal, S, Cezard, T, Risse, J E, Ritchie, M G & Bailey, N W 2018, ' Opposing patterns of intraspecific and interspecific differentiation in sex chromosomes and autosomes ', Molecular Ecology . https://doi.org/10.1111/mec.14725
Funding: Natural Environment Research Council grants to N.W.B., Grant/Award numbers: NE/G014906/1, NE/L011255/1; Orthopterists’ Society grant to P.A.M. Linking intraspecific and interspecific divergence is an important challenge in speciation resea
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3c2ebddb7bdf8fd5aacbd9ba82ee62c4
https://doi.org/10.1111/mec.14725
https://doi.org/10.1111/mec.14725