Zobrazeno 1 - 10
of 72
pro vyhledávání: '"Tim Roloff"'
Autor:
Eugenio Mutschler, Tim Roloff, Aitana Neves, Hege Vangstein Aamot, Belén Rodriguez-Sanchez, Mario Ramirez, John Rossen, Natacha Couto, Ângela Novais, Benjamin P. Howden, Sylvain Brisse, Sandra Reuter, Oliver Nolte, Adrian Egli, Helena M. B. Seth-Smith, the ESCMID Study Group for Epidemiological Markers (ESGEM), and ESCMID Study Group for Genomic and Molecular Diagnostics (ESGMD)
Publikováno v:
PeerJ, Vol 12, p e17673 (2024)
Whole genome sequencing (WGS) has become a vital tool in clinical microbiology, playing an important role in outbreak investigations, molecular surveillance, and identification of bacterial species, resistance mechanisms and virulence factors. Howeve
Externí odkaz:
https://doaj.org/article/8f632ea24ca34cd8832476c1cd0c394d
Autor:
Vanni Benvenga, Aline Cuénod, Srinithi Purushothaman, Gottfried Dasen, Maja Weisser, Stefano Bassetti, Tim Roloff, Martin Siegemund, Ulrich Heininger, Julia Bielicki, Marianne Wehrli, Paul Friderich, Reno Frei, Andreas Widmer, Kathrin Herzog, Hans Fankhauser, Oliver Nolte, Thomas Bodmer, Martin Risch, Olivier Dubuis, Sigrid Pranghofer, Romana Calligaris-Maibach, Susanne Graf, Vincent Perreten, Helena M. B Seth-Smith, Adrian Egli
Publikováno v:
Genome Medicine, Vol 16, Iss 1, Pp 1-17 (2024)
Abstract Background Few methicillin-resistant Staphylococcus aureus (MRSA) from the early years of its global emergence have been sequenced. Knowledge about evolutionary factors promoting the success of specific MRSA multi-locus sequence types (MLSTs
Externí odkaz:
https://doaj.org/article/61d7be2d38bc4023a381edeaaea49691
Autor:
Fanny Wegner, Blanca Cabrera-Gil, Araud Tanguy, Christiane Beckmann, Niko Beerenwinkel, Claire Bertelli, Matteo Carrara, Lorenzo Cerutti, Chaoran Chen, Samuel Cordey, Alexis Dumoulin, Louis du Plessis, Marc Friedli, Yannick Gerth, Gilbert Greub, Adrian Härri, Hans Hirsch, Cedric Howald, Michael Huber, Alexander Imhof, Laurent Kaiser, Verena Kufner, Stephen L. Leib, Karoline Leuzinger, Etleva Lleshi, Gladys Martinetti, Mirjam Mäusezahl, Milo Moraz, Richard Neher, Oliver Nolte, Alban Ramette, Maurice Redondo, Lorenz Risch, Lionel Rohner, Tim Roloff, Pascal Schläepfer, Katrin Schneider, Franziska Singer, Valeria Spina, Tanja Stadler, Erik Studer, Ivan Topolsky, Alexandra Trkola, Daniel Walther, Nadia Wohlwend, Cinzia Zehnder, Aitana Neves, Adrian Egli
Publikováno v:
Microbiology Spectrum, Vol 12, Iss 5 (2024)
ABSTRACTDuring the SARS-CoV-2 pandemic, many countries directed substantial resources toward genomic surveillance to detect and track viral variants. There is a debate over how much sequencing effort is necessary in national surveillance programs for
Externí odkaz:
https://doaj.org/article/c4ccaa18016f452ba4419207aed44b4b
Autor:
Veronika Muigg, Helena M.B. Seth-Smith, Kai-Manuel Adam, Maja Weisser, Vladimira Hinić, Annette Blaich, Tim Roloff, Ulrich Heininger, Hanna Schmid, Maurus Kohler, Lukas Graf, Dylan M. Winterflood, Pascal Schlaepfer, Daniel Goldenberger
Publikováno v:
BMC Microbiology, Vol 24, Iss 1, Pp 1-11 (2024)
Abstract Background Reliable species identification of cultured isolates is essential in clinical bacteriology. We established a new study algorithm named NOVA – Novel Organism Verification and Analysis to systematically analyze bacterial isolates
Externí odkaz:
https://doaj.org/article/77d0a7d164a443d880e7b9327be60668
Autor:
Aline Cuénod, Jessica Agnetti, Helena M. B. Seth-Smith, Tim Roloff, Denise Wälchli, Dimitri Shcherbakov, Rashid Akbergenov, Sarah Tschudin-Sutter, Stefano Bassetti, Martin Siegemund, Christian H. Nickel, Jacob Moran-Gilad, Timothy G. Keys, Valentin Pflüger, Nicholas R. Thomson, Adrian Egli
Publikováno v:
Genome Medicine, Vol 15, Iss 1, Pp 1-17 (2023)
Abstract Background Urinary tract infections (UTIs) are among the most common bacterial infections worldwide, often caused by uropathogenic Escherichia coli. Multiple bacterial virulence factors or patient characteristics have been linked separately
Externí odkaz:
https://doaj.org/article/24bce8ec0d7249b99753281a7d7df2ce
Autor:
Matthias von Rotz, Richard Kuehl, Ana Durovic, Sandra Zingg, Anett Apitz, Fanny Wegner, Helena M. B. Seth-Smith, Tim Roloff, Karoline Leuzinger, Hans H. Hirsch, Sabine Kuster, Manuel Battegay, Luigi Mariani, Stefan Schaeren, Stefano Bassetti, Florian Banderet-Uglioni, Adrian Egli, Sarah Tschudin-Sutter
Publikováno v:
Antimicrobial Resistance and Infection Control, Vol 12, Iss 1, Pp 1-10 (2023)
Abstract Background We sought to decipher transmission pathways in healthcare-associated infections with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) within our hospital by epidemiological work-up and complementary whole genome sequen
Externí odkaz:
https://doaj.org/article/d737146bcd2049c29729ee311e7df612
Autor:
Dominique Hilti, Faina Wehrli, Sabine Berchtold, Susanna Bigler, Thomas Bodmer, Helena M. B. Seth-Smith, Tim Roloff, Philipp Kohler, Christian R. Kahlert, Laurent Kaiser, Adrian Egli, Lorenz Risch, Martin Risch, Nadia Wohlwend
Publikováno v:
Microorganisms, Vol 12, Iss 2, p 321 (2024)
During the SARS-CoV-2 pandemic, the Dr. Risch medical group employed the multiplex TaqPathTM COVID-19 CE-IVD RT-PCR Kit for large-scale routine diagnostic testing in Switzerland and the principality of Liechtenstein. The TaqPath Kit is a widely used
Externí odkaz:
https://doaj.org/article/5f26ec04ca1b422385ff3cbcdf45d433
Autor:
Michael Schweitzer, Alfredo Mari, Tim Roloff, Esther Künzli, Stefanie Heller, Diana Albertos Torres, Marco Meola, Danica Nogarth, Leanid Laganenka, Lisa Prampolini, Helena M. B. Seth-Smith, Olivia Grüninger, Alexander Gensch, Josiane Reist, Sebastian Bonhoeffer, Wolf-Dietrich Hardt, Adrian Egli
Publikováno v:
Microbiology Research, Vol 14, Iss 1, Pp 177-189 (2023)
Introduction: Invading extended-spectrum beta-lactamase-producing Escherichia coli (ESBL-PE), non-ESBL E. coli, and other bacteria form a complex environment in the gut. The duration and dynamics of ESBL-PE colonization varies among individuals. Unde
Externí odkaz:
https://doaj.org/article/1e9b94db5f164dfd8fe7902699854719
Autor:
Frederike Waldeck, Salome N. Seiffert, Susanne Manser, Danuta Zemp, Angela Walt, Christoph Berger, Werner C. Albrich, Matthias Schlegel, Tim Roloff, Adrian Egli, Oliver Nolte, Christian R. Kahlert
Publikováno v:
Scientific Reports, Vol 12, Iss 1, Pp 1-11 (2022)
Abstract At our tertiary children’s hospital, infections with newly detected methicillin-resistant Staphylococcus aureus (MRSA) among children attending primary (age 6–12 years) and secondary school (age 13–16 years) nearly doubled in 2018 comp
Externí odkaz:
https://doaj.org/article/75960dad6c414659a4272bcd3f97fd74
Autor:
Lucas Romann, Laura Werlen, Nikki Rommers, Anja Hermann, Isabelle Gisler, Stefano Bassetti, Roland Bingisser, Martin Siegemund, Tim Roloff, Maja Weisser, Veronika Muigg, Vladimira Hinic, Michael Osthoff, Fabian C Franzeck, Adrian Egli
Publikováno v:
PLoS ONE, Vol 18, Iss 3, p e0282918 (2023)
BackgroundBlood cultures (BC) are critical for the diagnosis of bloodstream infections, pathogen identification, and resistance testing. Guidelines recommend a blood volume of 8-10 mL per bottle as lower volumes result in decreased sensitivity. We ai
Externí odkaz:
https://doaj.org/article/a42beb3b86f84ad4a37a627ce5553595