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Fitness factors impacting survival of a subsurface bacterium in contaminated groundwater.

Autor: Thorgersen MP; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602, United States., Goff JL; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602, United States., Trotter VV; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94710, United States., Poole Ii FL; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602, United States., Arkin AP; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94710, United States.; Department of Bioengineering, University of California, Berkeley, Berkeley, CA 94720, United States., Deutschbauer AM; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94710, United States.; Department of Plant and Microbial Biology, University of California, Berkeley, Berkeley, CA 94720, United States., Adams MWW; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602, United States.

Publikováno v: The ISME journal [ISME J] 2024 Jan 08; Vol. 18 (1).

Mixed nitrate and metal contamination influences operational speciation of toxic and essential elements.

Autor: Thorgersen MP; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA, USA. Electronic address: mthorger@uga.edu., Goff JL; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA, USA. Electronic address: JLGoff@uga.edu., Poole FL 2nd; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA, USA. Electronic address: fpoole@uga.edu., Walker KF; Earth and Planetary Sciences, University of Tennessee, Knoxville, TN, USA. Electronic address: kfwalker@lbl.gov., Putt AD; Earth and Planetary Sciences, University of Tennessee, Knoxville, TN, USA. Electronic address: aputt@lbl.gov., Lui LM; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA. Electronic address: lmlui@lbl.gov., Hazen TC; Earth and Planetary Sciences, University of Tennessee, Knoxville, TN, USA; BioSciences Division, Oak Ridge National Lab, Oak Ridge, TN, USA; Department of Civil and Environmental Engineering, University of Tennessee, Knoxville, TN, USA. Electronic address: tchazen@utk.edu., Arkin AP; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA; Department of Bioengineering, University of California at Berkeley, Berkeley, CA, USA. Electronic address: APArkin@lbl.gov., Adams MWW; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA, USA. Electronic address: adamsm@uga.edu.

Publikováno v: Environmental pollution (Barking, Essex : 1987) [Environ Pollut] 2023 Dec 01; Vol. 338, pp. 122674. Date of Electronic Publication: 2023 Oct 02.

Ecophysiological and genomic analyses of a representative isolate of highly abundant Bacillus cereus strains in contaminated subsurface sediments.

Autor: Goff JL; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA., Szink EG; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA., Thorgersen MP; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA., Putt AD; Earth and Planetary Sciences, University of Tennessee, Knoxville, Tennessee, USA., Fan Y; Institute for Environmental Genomics, University of Oklahoma, Norman, Oklahoma, USA., Lui LM; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA., Nielsen TN; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA., Hunt KA; Civil and Environmental Engineering, University of Washington, Seattle, Washington, USA., Michael JP; Institute for Environmental Genomics, University of Oklahoma, Norman, Oklahoma, USA., Wang Y; Institute for Environmental Genomics, University of Oklahoma, Norman, Oklahoma, USA., Ning D; Institute for Environmental Genomics, University of Oklahoma, Norman, Oklahoma, USA., Fu Y; Institute for Environmental Genomics, University of Oklahoma, Norman, Oklahoma, USA., Van Nostrand JD; Institute for Environmental Genomics, University of Oklahoma, Norman, Oklahoma, USA., Poole FL 2nd; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA., Chandonia JM; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA., Hazen TC; Earth and Planetary Sciences, University of Tennessee, Knoxville, Tennessee, USA.; Genome Sciences Division, Oak Ridge National Lab, Oak Ridge, Tennessee, USA.; Department of Civil and Environmental Engineering, University of Tennessee, Knoxville, Tennessee, USA., Stahl DA; Civil and Environmental Engineering, University of Washington, Seattle, Washington, USA., Zhou J; Institute for Environmental Genomics, University of Oklahoma, Norman, Oklahoma, USA.; Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USA.; School of Civil Engineering and Environmental Sciences, University of Oklahoma, Norman, Oklahoma, USA.; Earth and Environmental Sciences, Lawrence Berkley National Laboratory, Berkeley, California, USA., Arkin AP; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.; Department of Bioengineering, University of California at Berkeley, Berkeley, California, USA., Adams MWW; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA.

Publikováno v: Environmental microbiology [Environ Microbiol] 2022 Nov; Vol. 24 (11), pp. 5546-5560. Date of Electronic Publication: 2022 Sep 01.

Complete Genome Sequence of Bacillus cereus Strain CPT56D-587-MTF, Isolated from a Nitrate- and Metal-Contaminated Subsurface Environment.

Autor: Goff JL; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA., Lui LM; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA., Nielsen TN; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA., Thorgersen MP; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA., Szink EG; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA., Chandonia JM; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA., Poole FL 2nd; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA., Zhou J; Institute for Environmental Genomics, University of Oklahoma, Norman, Oklahoma, USA.; Department of Microbiology and Plant Biology, University of Oklahoma, Norman, Oklahoma, USA., Hazen TC; Oak Ridge National Lab, Oak Ridge, Tennessee, USA.; Department of Civil and Environmental Engineering, University of Tennessee, Knoxville, Tennessee, USA., Arkin AP; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.; Department of Bioengineering, University of California, Berkeley, Berkeley, California, USA., Adams MWW; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA.

Publikováno v: Microbiology resource announcements [Microbiol Resour Announc] 2022 May 19; Vol. 11 (5), pp. e0014522. Date of Electronic Publication: 2022 Apr 27.