Zobrazeno 1 - 10
of 24
pro vyhledávání: '"Thomas R Sibley"'
Autor:
Kira Newman, Helen Y Chu, Michael Boeckh, Janet A Englund, Michael Famulare, Lea M Starita, Elisabeth Brandstetter, Chris D Frazer, Peter D Han, Reena K Gulati, James Hadfield, Anahita Kiavand, Louise E Kimball, Kirsten Lacombe, Thomas R Sibley, Jennifer K Logue, Victoria Rachel Lyon, Caitlin R Wolf, Jay Shendure, Trevor Bedford
Publikováno v:
BMJ Open, Vol 10, Iss 10 (2020)
Introduction Influenza epidemics and pandemics cause significant morbidity and mortality. An effective response to a potential pandemic requires the infrastructure to rapidly detect, characterise, and potentially contain new and emerging influenza st
Externí odkaz:
https://doaj.org/article/9354581cd4824a23807adf4d7d2148c7
Autor:
Amanda C. Perofsky, Chelsea L. Hansen, Roy Burstein, Shanda Boyle, Robin Prentice, Cooper Marshall, David Reinhart, Ben Capodanno, Melissa Truong, Kristen Schwabe-Fry, Kayla Kuchta, Brian Pfau, Zack Acker, Jover Lee, Thomas R. Sibley, Evan McDermot, Leslie Rodriguez-Salas, Jeremy Stone, Luis Gamboa, Peter D. Han, Amanda Adler, Alpana Waghmare, Michael L. Jackson, Michael Famulare, Jay Shendure, Trevor Bedford, Helen Y. Chu, Janet A. Englund, Lea M. Starita, Cécile Viboud
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-17 (2024)
Abstract Many studies have used mobile device location data to model SARS-CoV-2 dynamics, yet relationships between mobility behavior and endemic respiratory pathogens are less understood. We studied the effects of population mobility on the transmis
Externí odkaz:
https://doaj.org/article/0fb47b191b674300a20c1966f49b4174
Autor:
Jover Lee, James Hadfield, Allison Black, Thomas R. Sibley, Richard A. Neher, Trevor Bedford, John Huddleston
Publikováno v:
Frontiers in Bioinformatics. 3
Seasonal influenza vaccines must be updated regularly to account for mutations that allow influenza viruses to escape our existing immunity. A successful vaccine should represent the genetic diversity of recently circulating viruses and induce antibo
Autor:
Chelsea Hansen, Amanda C. Perofsky, Roy Burstein, Michael Famulare, Shanda Boyle, Robin Prentice, Cooper Marshall, Benjamin J. J. McCormick, David Reinhart, Ben Capodanno, Melissa Truong, Kristen Schwabe-Fry, Kayla Kuchta, Brian Pfau, Zack Acker, Jover Lee, Thomas R. Sibley, Evan McDermot, Leslie Rodriguez-Salas, Jeremy Stone, Luis Gamboa, Peter D. Han, Jeffery S. Duchin, Alpana Waghmare, Janet A. Englund, Jay Shendure, Trevor Bedford, Helen Y. Chu, Lea M. Starita, Cécile Viboud
Publikováno v:
JAMA network open. 5(12)
ImportanceFew US studies have reexamined risk factors for SARS-CoV-2 positivity in the context of widespread vaccination and new variants or considered risk factors for cocirculating endemic viruses, such as rhinovirus.ObjectivesTo evaluate how risk
Autor:
Chelsea L. Hansen, Amanda Perofsky, Roy Burstein, Michael Famulare, Shanda Boyle, Robin Prentice, Cooper Marshall, Benjamin JJ McCormick, David Reinhart, Ben Capodanno, Melissa Truong, Kristen Schwabe-Fry, Kayla Kuchta, Brian Pfau, Zack Acker, Jover Lee, Thomas R. Sibley, Evan McDermot, Leslie Rodriguez-Salas, Jeremy Stone, Luis Gamboa, Peter D. Han, Jeffery S. Duchin, Alpana Waghmare, Janet A. Englund, Jay Shendure, Trevor Bedford, Helen Y. Chu, Lea M. Starita, Cécile Viboud
ImportanceFew US studies have reexamined risk factors for SARS-CoV-2 positivity in the context of widespread vaccination and new variants or considered risk factors for co-circulating endemic viruses, such as rhinovirus.ObjectiveTo understand how ris
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::f6ab3450ac514856159373e2fa963525
https://doi.org/10.1101/2022.08.12.22278203
https://doi.org/10.1101/2022.08.12.22278203
Autor:
Kairsten Fay, Jover Lee, Gregory R. Hart, Lea M. Starita, Thomas R. Sibley, Amanda L. Adler, Trevor Bedford, Janet A. Englund, Peter D Han, Mark J. Rieder, Denise J. McCulloch, Helen Y. Chu, Michael L. Jackson, Michael Famulare, Kirsten Lacombe, Elisabeth Brandstetter, Deborah A. Nickerson
Publikováno v:
BMC Infectious Diseases, Vol 21, Iss 1, Pp 1-8 (2021)
BMC Infectious Diseases
BMC Infectious Diseases
Background Unusually high snowfall in western Washington State in February 2019 led to widespread school and workplace closures. We assessed the impact of social distancing caused by this extreme weather event on the transmission of respiratory virus
Autor:
Thomas R. Sibley, Weizhi Zhong, Kairsten Fay, Trevor Bedford, James P. Hughes, Ashley E. Kim, Katia F. Harb, Naomi Wilcox, Lewis Back, Ariana Magedson, Sarah L Sohlberg, Ben Pelle, Erica Ryke, Brian Pfau, Christina M. Lockwood, Peter D Han, Sarah Heidl, Geoffrey S. Gottlieb, Jay Shendure, Sanjay Srivatsan, Jover Lee, Jessica O'Hanlon, J. Chris Craft, Anne Emanuels, Christian D. Frazar, Amanda M. Casto, Kristen M. Schwabe-Fry, Melissa Truong, Ana A. Weil, Natalie K. Lo, Deborah A. Nickerson, Lea M. Starita, Misja Ilcisin, Emily P. Greismer, Helen Y. Chu, Shari Cho
Publikováno v:
Open Forum Infectious Diseases
BackgroundTesting programs have been utilized as part of SARS-CoV-2 mitigation strategies on university campuses, and it is not known which strategies successfully identify cases and contain outbreaks.ObjectiveEvaluation of a testing program to contr
Autor:
Emma B. Hodcroft, Misja Ilcisin, Elias Harkins, Richard A. Neher, Kairsten Fay, Trevor Bedford, Jover Lee, James Hadfield, John Huddleston, Thomas R. Sibley
Publikováno v:
Huddleston, John; Hadfield, James; Sibley, Thomas R; Lee, Jover; Fay, Kairsten; Ilcisin, Misja; Harkins, Elias; Bedford, Trevor; Neher, Richard A; Hodcroft, Emma B. (2021). Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens. Journal of Open Source Software, 6(57), p. 2906. Open Journals 10.21105/joss.02906
Journal of open source software
Journal of open source software
Summary and statement of need The analysis of human pathogens requires a diverse collection of bioinformatics tools. These tools include standard genomic and phylogenetic software and custom software developed to handle the relatively numerous and sh
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9a1a6fafd16564bc67c24a8f33e31095
Autor:
Elisabeth Brandstetter, Deborah A. Nickerson, Jessica Heimonen, Naomi Wilcox, Kairsten Fay, Peter D Han, Mark J. Rieder, Thomas R. Sibley, Margaret M. Van de Loo, Barry R. Lutz, Lea M. Starita, Misja Ilcisin, Trevor Bedford, Denise J. McCulloch, Jennifer Mooney, Ashley E. Kim, Helen Y. Chu, Michael Boeckh, Rachel E. Geyer, Chelsey Graham, Jover Lee, Janet A. Englund, Victoria Lyon, Matthew Thompson, Amanda M. Casto
Publikováno v:
Journal of Clinical Microbiology
While influenza and other respiratory pathogens cause significant morbidity and mortality, the community-based burden of these infections remains incompletely understood. The development of novel methods to detect respiratory infections is essential
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3b9a068b058d9906ff044c48f18b7c1c
https://doi.org/10.1101/2020.12.07.415653
https://doi.org/10.1101/2020.12.07.415653
Autor:
Seattle Flu Study Investigators, Victoria Lyon, Jay Shendure, Reena Gulati, Janet A. Englund, Trevor Bedford, James Hadfield, Kirsten Lacombe, Thomas R. Sibley, Michael L. Jackson, Michael Famulare, Amanda L. Adler, Barry R. Lutz, Helen Y. Chu, Co-Investigators, Caitlin R Wolf, Kira L. Newman, Peter D Han, Michael Boeckh, Jennifer Logue, Lea M. Starita, Louise E. Kimball, Monica Zigman Suchsland, Anahita Kiavand, Elisabeth Brandstetter, Deborah A. Nickerson, Mark J. Rieder, Chris D. Frazar
Publikováno v:
BMJ Open, Vol 10, Iss 10 (2020)
BMJ Open
BMJ Open
IntroductionInfluenza epidemics and pandemics cause significant morbidity and mortality. An effective response to a potential pandemic requires the infrastructure to rapidly detect, characterize, and potentially contain new and emerging influenza str