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pro vyhledávání: '"Thomas C. Carroll"'
Publikováno v:
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS
In this paper, we consider the pair-wise semiglobal sequence alignment problem with gaps, which is motivated by the re-sequencing problem that requires to assemble short reads sequences into a genome sequence by referring to a reference sequence. The
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::23a695c43086383212351d560de410a6
http://livrepository.liverpool.ac.uk/3039311/1/GapsMisJournal.pdf
http://livrepository.liverpool.ac.uk/3039311/1/GapsMisJournal.pdf
Autor:
Thomas C. Carroll, Prudence W. H. Wong
Publikováno v:
ICPP Workshops
Workshop on Heterogeneous and Unconventional Cluster Architectures and Applications (HUCAA)
Workshop on Heterogeneous and Unconventional Cluster Architectures and Applications (HUCAA)
GPUs are commonly used as coprocessors to accelerate a compute-intensive task, thanks to their massively parallel architecture. There is study into different abstract parallel models, which allow researchers to design and analyse parallel algorithms.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b6380f321bf851c59d726fb9bea4f9ff
https://doi.org/10.1109/icppw.2017.28
https://doi.org/10.1109/icppw.2017.28
Publikováno v:
CLUSTER
In this paper we consider the pair-wise sequence alignment problem with gaps, which is motivated by the re-sequencing problem that requires to assemble short reads sequences into a genome sequence by referring to a reference sequence. The problem has
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::b975bf362b5b93ebad4f0d32dc9f00a2
https://doi.org/10.1109/cluster.2015.109
https://doi.org/10.1109/cluster.2015.109