Bacterioplankton dynamics within a large anthropogenically impacted urban estuary

Autor: Thomas C Jeffries, Maria L Schmitz Fontes, Daniel P Harrison, Virginie evan Dongen-Vogels, Bradley D Eyre, Peter J Ralph, Justin Robert Seymour

Publikováno v: Frontiers in Microbiology, Vol 6 (2016)

The abundant and diverse microorganisms that inhabit aquatic systems are both determinants and indicators of aquatic health, providing essential ecosystem services such as nutrient cycling but also causing harmful blooms and disease in impacted habit

Externí odkaz: https://doaj.org/article/b3c64dd9f768467cb38a762608c283b3

Substrate type determines metagenomic profiles from diverse chemical habitats.

Autor: Thomas C Jeffries, Justin R Seymour, Jack A Gilbert, Elizabeth A Dinsdale, Kelly Newton, Sophie S C Leterme, Ben Roudnew, Renee J Smith, Laurent Seuront, James G Mitchell

Publikováno v: PLoS ONE, Vol 6, Iss 9, p e25173 (2011)

Environmental parameters drive phenotypic and genotypic frequency variations in microbial communities and thus control the extent and structure of microbial diversity. We tested the extent to which microbial community composition changes are controll

Externí odkaz: https://doaj.org/article/568aec95e58c4b7e918e9bcd53da92b2

Abscisic acid supports colonization of Eucalyptus grandis roots by the mutualistic ectomycorrhizal fungus Pisolithus microcarpus

Autor: Anna Lipzen, Igor V. Grigoriev, Richard Hill, Donovin Coles, Krista L. Plett, Christopher I Cazzonelli, Francis Martin, Ian C. Anderson, Johanna Wong-Bajracharya, Vivian Ng, Sidra Anwar, Thomas C. Jeffries, Mei Wang, Jonathan M. Plett

Publikováno v: New Phytologist. 233:966-982

The pathways regulated in ectomycorrhizal (EcM) plant hosts during the establishment of symbiosis are not as well understood when compared to the functional stages of this mutualistic interaction. Our study used the EcM host Eucalyptus grandis to elu

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c46616310815d722415b34100b29b933
https://doi.org/10.1111/nph.17825

Synergetic impacts of turbulence and fishing reduce ocean biomass

Autor: Ben Roudnew, Crystal Beckmann, Kelly Newton, Justin R. Seymour, James G. Mitchell, Maria Kleshnina, Marika Takeuchi, Nardi Cribb, Virginie van Dongen-Vogels, Laurent Seuront, Susanna R. Grigson, Charlie Huveneers, Renee J. Smith, Claire Charlton, Paul J. Rogers, Eloise Prime, James S. Paterson, Jody C. McKerral, Karina Winn, Trish J. Lavery, Thomas C. Jeffries

A universal scaling relationship exists between organism abundance and body size1,2. Within ocean habitats this relationship deviates from that generally observed in terrestrial systems2–4, where marine macro-fauna display steeper size-abundance sc

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6b4c9ed925735d131c8644b18793d1a1
https://cnrs.hal.science/hal-03877282

Global phylogeography and ancient evolution of the widespread human gut virus crAssphage

Autor: Steven R. Head, Emma Billings, Stephen Wandro, Jane M. Carlton, Alexandra Zhernakova, A. Murat Eren, Zhe Xue Quan, Anders S. Nilsson, Gyu Sung Cho, Udi Qimron, Martin M. Kowalewski, John Shimashita, Gillian A.O. Rice, Frank Møller Aarestrup, Elyse Stachler, Vito Adrian Cantu, Linsey C. Marr, Alessandro Rossi, Angela McCann, Colin Hill, Cristina García-Aljaro, Kristen M. Gulino, David A. Lipson, Rene S. Hendriksen, Bryan A. White, Bas E. Dutilh, Bashir Mukhtar Elwasila, Karla Mazankova, Alexander V. Tyakht, Julia M. Maritz, Ronan Strain, Rodrigo De la Iglesia, Ramy K. Aziz, Kyle Levi, Alan Twaddle, Alejandro Reyes Muñoz, Katelyn McNair, Alejandro A. Vega, Nathaniel J. Dominy, Abigail E. Asangba, Robert Edwards, Rasha Odeh, Olivia D. Nigro, Gunduz Ahmadov, Raúl R. Raya, Nam Nguyen, Charles M. A. P. Franz, Nicole Trefault, Adán Ramírez-Rojas, Michael P. Doane, Randall E. Junge, Patrick A. de Jonge, Jingyuan Fu, Taylor O'Connell, Mike Cranfield, German Tapia, Heikki Hyöty, Nicolás A. Villagra, Cisca Wijmenga, Henrike Zschach, Megan M. Morris, Franklin L. Nobrega, Elena N. Ilina, David Thomas McCarthy, Daniel Cazares, Silvia Monteiro, Lawrence Mugisha, Daniel A. Cuevas, Horst Neve, Przemyslaw Decewicz, John M. Haggerty, Ricardo Santos, Deepak Kumaresan, Shahar Molshanski-Mor, Andrew S. Whiteley, Benjamin Moreira-Grez, Rebecca M. Stumpf, Katrine Whiteson, Holly M. Norman, Jeremy J. Barr, Peter C. Fineran, Jeroen Wagemans, Samuel L. Díaz Muñoz, Kim Reasor, Elizabeth A. Dinsdale, Mitchell T. Irwin, Aaron J. Prussin, Mohammadali Khan Mirzaei, Maite Muniesa, Christelle Desnues, Montserrat Llagostera, Rob Lavigne, Abeer Alassaf, Tess Condeff, Petra Rainetova, María Mercedes Zambrano, Adrian Cazares, Elodie Ghedin, Alexander Kurilshikov, Lukasz Dziewit, Thomas C. Jeffries, Mary Ann Ugochi Ibekwe, Eugenia S. Lisitsyna, Juan Jofre, Pedro J. Torres, Maria Ohaeri, Mariana Piuri, Andrew Oliver, Steven R. Leigh, Ondrej Cinek, Stan J. J. Brouns, Josefa Antón, Pilar Cortés, Kyle Bibby, Lars C. Stene, Pablo Vinuesa, Scott T. Kelley

Publikováno v: Nature Microbiology
Nature Microbiology, 2019, 4, pp.1727-1736. ⟨10.1038/s41564-019-0494-6⟩
Nature Microbiology, 4, 1727. Nature Publishing Group
Nat Microbiol
Edwards, R A, Vega, A A, Norman, H M, Ohaeri, M, Levi, K, Dinsdale, E A, Cinek, O, Aziz, R K, McNair, K, Barr, J J, Bibby, K, Brouns, S J J, Cazares, A, de Jonge, P A, Desnues, C, Díaz Muñoz, S L, Fineran, P C, Kurilshikov, A, Lavigne, R, Mazankova, K, McCarthy, D T, Nobrega, F L, Reyes Muñoz, A, Tapia, G, Trefault, N, Tyakht, A V, Vinuesa, P, Wagemans, J, Zhernakova, A, Møller Aarestrup, F, Ahmadov, G, Alassaf, A, Anton, J, Asangba, A, Billings, E K, Cantu, V A, Carlton, J M, Cazares, D, Cho, G S, Condeff, T, Cortés, P, Cranfield, M, Cuevas, D A, De la Iglesia, R, Decewicz, P, Doane, M P, Dominy, N J, Dziewit, L, Elwasila, B M, Eren, A M, Franz, C, Fu, J, Garcia-Aljaro, C, Ghedin, E, Gulino, K M, Haggerty, J M, Head, S R, Hendriksen, R S, Hill, C, Hyöty, H, Ilina, E N, Irwin, M T, Jeffries, T C, Jofre, J, Junge, R E, Kelley, S T, Khan Mirzaei, M, Kowalewski, M, Kumaresan, D, Leigh, S R, Lipson, D, Lisitsyna, E S, Llagostera, M, Maritz, J M, Marr, L C, McCann, A, Molshanski-Mor, S, Monteiro, S, Moreira-Grez, B, Morris, M, Mugisha, L, Muniesa, M, Neve, H, Nguyen, N P, Nigro, O D, Nilsson, A S, O’Connell, T, Odeh, R, Oliver, A, Piuri, M, Prussin, A J, Qimron, U, Quan, Z X, Rainetova, P, Ramírez-Rojas, A, Raya, R, Reasor, K, Rice, G A O, Rossi, A, Santos, R, Shimashita, J, Stachler, E N, Stene, L C, Strain, R, Stumpf, R, Torres, P J, Twaddle, A, Ugochi Ibekwe, M A, Villagra, N, Wandro, S, White, B, Whiteley, A, Whiteson, K L, Wijmenga, C, Zambrano, M M, Zschach, H & Dutilh, B E 2019, ' Global phylogeography and ancient evolution of the widespread human gut virus crAssphage ', Nature Microbiology, vol. 4, pp. 1727-1736 . https://doi.org/10.1038/s41564-019-0494-6
Nature Microbiology, Nature Publishing Group, 2019, ⟨10.1038/s41564-019-0494-6⟩
Nature Microbiology, 4, 1727-1736
RUA. Repositorio Institucional de la Universidad de Alicante
Universidad de Alicante (UA)
Nature Microbiology, 4(10), 1727-1736. Nature Publishing Group
Nature Microbiology, 4, 10, pp. 1727-1736

Microbiomes are vast communities of microorganisms and viruses that populate all natural ecosystems. Viruses have been considered to be the most variable component of microbiomes, as supported by virome surveys and examples of high genomic mosaicism.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::765409da8f9e6a57d535c261c8666f7b
https://doi.org/10.1038/s41564-019-0494-6