Zobrazeno 1 - 10
of 10
pro vyhledávání: '"Tatyana I. Kalashnikova"'
Autor:
Julia M. Gauglitz, Kiana A. West, Wout Bittremieux, Candace L. Williams, Kelly C. Weldon, Morgan Panitchpakdi, Francesca Di Ottavio, Christine M. Aceves, Elizabeth Brown, Nicole C. Sikora, Alan K. Jarmusch, Cameron Martino, Anupriya Tripathi, Michael J. Meehan, Kathleen Dorrestein, Justin P. Shaffer, Roxana Coras, Fernando Vargas, Lindsay DeRight Goldasich, Tara Schwartz, MacKenzie Bryant, Gregory Humphrey, Abigail J. Johnson, Katharina Spengler, Pedro Belda-Ferre, Edgar Diaz, Daniel McDonald, Qiyun Zhu, Emmanuel O. Elijah, Mingxun Wang, Clarisse Marotz, Kate E. Sprecher, Daniela Vargas-Robles, Dana Withrow, Gail Ackermann, Lourdes Herrera, Barry J. Bradford, Lucas Maciel Mauriz Marques, Juliano Geraldo Amaral, Rodrigo Moreira Silva, Flavio Protasio Veras, Thiago Mattar Cunha, Rene Donizeti Ribeiro Oliveira, Paulo Louzada-Junior, Robert H. Mills, Paulina K. Piotrowski, Stephanie L. Servetas, Sandra M. Da Silva, Christina M. Jones, Nancy J. Lin, Katrice A. Lippa, Scott A. Jackson, Rima Kaddurah Daouk, Douglas Galasko, Parambir S. Dulai, Tatyana I. Kalashnikova, Curt Wittenberg, Robert Terkeltaub, Megan M. Doty, Jae H. Kim, Kyung E. Rhee, Julia Beauchamp-Walters, Kenneth P. Wright, Maria Gloria Dominguez-Bello, Mark Manary, Michelli F. Oliveira, Brigid S. Boland, Norberto Peporine Lopes, Monica Guma, Austin D. Swafford, Rachel J. Dutton, Rob Knight, Pieter C. Dorrestein
Publikováno v:
Nature biotechnology, vol 40, iss 12
Nat Biotechnol
Nat Biotechnol
Human untargeted metabolomics studies annotate only ~10% of molecular features. We introduce reference-data-driven analysis to match metabolomics tandem mass spectrometry (MS/MS) data against metadata-annotated source data as a pseudo-MS/MS reference
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fadcc5a8ebaed4c919d942163887bc61
https://doi.org/10.1038/s41587-022-01368-1
https://doi.org/10.1038/s41587-022-01368-1
Autor:
Charly Chahwan, David E. Lee, Curt Wittenberg, Tatyana I. Kalashnikova, Noel F. Lowndes, Anna Travesa, Robertus A.M. de Bruin, Sarah Rose Cass
Publikováno v:
Molecular and cellular biology. 37(16)
In Saccharomyces cerevisiae, G1/S transcription factors MBF and SBF regulate a large family of genes important for entry to the cell cycle and DNA replication and repair. Their regulation is crucial for cell viability, and it is conserved throughout
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c84ef3ae92c685d046115f7f4b814e53
https://pubmed.ncbi.nlm.nih.gov/23382076
https://pubmed.ncbi.nlm.nih.gov/23382076
Autor:
Trey Ideker, Aaron Aslanian, Tatyana I. Kalashnikova, Curt Wittenberg, John R. Yates, Marcus B. Smolka, Robertus A.M. de Bruin, Dwight Kuo, Marisela Guaderrama, Kevin K. Thai, Anna Travesa
Publikováno v:
The EMBO Journal. 31:1811-1822
MBF and SBF transcription factors regulate a large family of coordinately expressed G1/S genes required for early cell-cycle functions including DNA replication and repair. SBF is inactivated upon S-phase entry by Clb/CDK whereas MBF targets are repr
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::dfa9e817a27f179db95f70055ddec956
https://doi.org/10.1038/emboj.2012.28
https://doi.org/10.1038/emboj.2012.28
Publikováno v:
Molecular and Cellular Biology. 24:8994-9005
SCFGrr1, one of several members of the SCF family of E3 ubiquitin ligases in budding Saccharomyces cerevisiae, is required for both regulation of the cell cycle and nutritionally controlled transcription. In addition to its role in degradation of Gic
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::86a30d8ba1f6f4f384a65d590ce72514
https://doi.org/10.1128/mcb.24.20.8994-9005.2004
https://doi.org/10.1128/mcb.24.20.8994-9005.2004
Autor:
Anna Travesa, Curt Wittenberg, Robertus A.M. de Bruin, Charly Chahwan, Sarah Rose Cass, Tatyana I. Kalashnikova, Noel F. Lowndes, David E. Lee
In Saccharomyces cerevisiae, G(1)/S transcription factors MBF and SBF regulate a large family of genes important for entry to the cell cycle and DNA replication and repair. Their regulation is crucial for cell viability, and it is conserved throughou
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5c78d1c1a7ca404e947dc7c9ef26058d
http://hdl.handle.net/10379/14192
http://hdl.handle.net/10379/14192
Periodic expression of large families of genes during the cell cycle is one of the primary cellular mechanisms imposing an orderly progression of events during the cell cycle. The most extensive analysis of the cell cycle regulatory network has been
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a2f68ae5595ca04cdfcc3b9ebec55de0
https://europepmc.org/articles/PMC2573305/
https://europepmc.org/articles/PMC2573305/
Autor:
Aaron Aslanian, John R. Yates, Curt Wittenberg, R. A. M. de Bruin, James A. Wohlschlegel, Charly Chahwan, Tatyana I. Kalashnikova, Paul Russell
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America. 105(32)
The cell cycle transcriptional program imposes order on events of the cell-cycle and is a target for signals that regulate cell-cycle progression, including checkpoints required to maintain genome integrity. Neither the mechanism nor functional signi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d3a275338aa67f978fafc588ad8f9fe1
https://pubmed.ncbi.nlm.nih.gov/18682565
https://pubmed.ncbi.nlm.nih.gov/18682565
Autor:
Mabelle Ashe, Curt Wittenberg, John R. Yates, Tatyana I. Kalashnikova, W. Hayes McDonald, Robertus A.M. de Bruin
Publikováno v:
The Journal of biological chemistry. 283(10)
In the budding yeast Saccharomyces cerevisiae, cell cycle initiation is prompted during G(1) phase by Cln3/cyclin-dependent protein kinase-mediated transcriptional activation of G(1)-specific genes. A recent screening performed to reveal novel intera
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3f59b9b578eb3b0d73b7ff459b8950cc
https://pubmed.ncbi.nlm.nih.gov/18160399
https://pubmed.ncbi.nlm.nih.gov/18160399
Autor:
Robertus A.M. de Bruin, Paul Russell, Curt Wittenberg, Charly Chahwan, Tatyana I. Kalashnikova, James A. Wohlschlegel, John R. Yates, W. Hayes McDonald
Publikováno v:
Molecular cell. 23(4)
Summary G1-specific transcription in yeast depends upon SBF and MBF. We have identified Nrm1 ( n egative r egulator of M BF targets 1), as a stable component of MBF. NRM1 ( YNR009w ), an MBF-regulated gene expressed during late G1 phase, associates w
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0c2342271a2151717b81c5b7f847d97a
https://pubmed.ncbi.nlm.nih.gov/16916637
https://pubmed.ncbi.nlm.nih.gov/16916637
Autor:
Karin Flick, Marisela Guaderrama, Nathalie Spielewoy, Hui-Chu Chang, Tatyana I. Kalashnikova, Curt Wittenberg, Qianzheng Zhu
Publikováno v:
Molecular biology of the cell. 14(8)
In budding yeast, HXT genes encoding hexose permeases are induced by glucose via a mechanism in which the F box protein Grr1 antagonizes activity of the transcriptional repressor Rgt1. Neither the mechanism of Rgt1 inactivation nor the role of Grr1 i
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c88014ed667b351c0abde86a0fe78d62
https://pubmed.ncbi.nlm.nih.gov/12925759
https://pubmed.ncbi.nlm.nih.gov/12925759