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Geographical contrasts of Y-chromosomal haplogroups from wild and domestic goats reveal ancient migrations and recent introgressions

Autor: Nijman, I. J., Rosen, B. D., Bardou, P., Faraut, T., Cumer, T., Daly, K. G., Zheng, Z., Cai, Y., Asadollahpour, H., Kul, B. C., Zhang, W. -Y., Guangxin, E., Ayin, A., Baird, H., Bakhtin, M., Balteanu, V. A., Barfield, D., Berger, B., Blichfeldt, T., Boink, G., Bugiwati, S. R. A., Cai, Z., Carolan, S., Clark, E., Cubric-Curik, V., Dagong, M. I. A., Dorji, T., Drew, L., Guo, J., Hallsson, J., Horvat, S., Kantanen, J., Kawaguchi, F., Kazymbet, P., Khayatzadeh, N., Kim, N., Shah, M. K., Liao, Y., Martinez, A., Masangkay, J., Masaoka, M., Mazza, R., Mcewan, J., Milanesi, M., Omar, F. M., Nomura, Y., Ouchene-Khelifi, N. -A., Pereira, F., Sahana, G., Salavati, M., Sasazaki, S., Da Silva, A., Simcic, M., Solkner, J., Sutherland, A., Tigchelaar, J., Zhang, H., Ajmone-Marsan, P., Bradley, D. G., Colli, L., Drogemuller, C., Jiang, Y., Lei, C., Mannen, H., Pompanon, F., Tosser-Klopp, G., Lenstra, J. A., Kijas, J., Guldbrandtsen, B., Denoyelle, L., Sarry, J., le Talouarn, E., Alberti, A., Orvain, C., Engelen, S., Duby, D., Martin, P., Danchin, C., Duclos, D., Allain, D., Arquet, R., Mandonnet, N., Naves, M., Palhiere, I., Rupp, R., Rezaei, H. R., Foran, M., Stella, A., Del Corvo, M., Crisa, A., Marletta, D., Crepaldi, P., Ottino, M., Randi, E., Mujibi, D. F., Gondwe, T., Benjelloun, B., Taela, M. D. G., Nash, O., Moaeen-ud-Din, M., Visser, C., Goyache, F., Alvarez, I., Amills, M., Sanchez, A., Capote, J., Jordana, J., Pons, A., Balears, I., Molina, A., Mruttu, H. A., Masiga, C. W., Van Tassell, C. P., Reecy, J., Luikart, G., Sikosana, J., Anila, H., Petrit, D., Roswitha, B., Philippe, B., Aziz, F., Christos, P., El-Barody, M. A. A., Pierre, T., Phillip, E., Gordon, L., Albano, B. -P., Stephanie, Z., Michel, T., Georg, E., Horst, B., Eveline, I. -A., Luhken, G., Krugmann, D., Eva-Maria, P., Shirin, L., Katja, G., Christina, P., Jutta, R., Marco, B., Andreas, G., Al Tarrayrah, J., Georgios, K., Olga, K., Katerina, K., Christina, L., Anton, I., Lazlo, F., Gabriele, C., Elisabetta, M., Marco, P., Antonello, C., Tiziana, S., Mario, C., Francesca, F., Stefano, G., Marta, M., Bordonaro, S., Giuseppe, D. U., Fabio, P., Mariasilvia, D. A., Alessio, V., Irene, C., Lorraine, P., Mahamoud, A. -S., Van Cann, L. M., Roman, N., Popielarczyk, D., Ewa, S., Augustin, V., Susana, D., Javier, C., Oscar, C., David, G., Regis, C., Gabriela, O. -R., Glowatzki, M. -L., Okan, E., Inci, T., Evren, K., Mike, B., Trinidad, P., Gabriela, J., Godfrey, H., Stella, D., Louise, W., Martin, T., Sam, J., Riccardo, S.

Publikováno v: Nijman, Isaäc J; Rosen, Benjamin D; Bardou, Philippe; Faraut, Thomas; Cumer, Tristan; Daly, Kevin G; Zheng, Zhuqing; Cai, Yudong; Asadollahpour, Hojjat; Kul, Bengi Çınar; Zhang, Wei-Yi; E, Guangxin; Ayin, A; Baird, Hayley; Bakhtin, Meirat; Bâlteanu, Valentin A; Barfield, Diana; Berger, Beate; Blichfeldt, Thor; Boink, Geert; ... (2022). Geographical contrasts of Y-chromosomal haplogroups from wild and domestic goats reveal ancient migrations and recent introgressions. Molecular Ecology, 31(16), pp. 4364-4380. Wiley-Blackwell 10.1111/mec.16579
Consortium, V G, Nijman, I J, Rosen, B D, Bardou, P, Faraut, T, Cumer, T, Daly, K G, Zheng, Z, Cai, Y, Asadollahpour, H, Kul, B Ç, Zhang, W-Y, Guangxin, E, Ayin, A, Baird, H, Bakhtin, M, Bâlteanu, V A, Barfield, D, Berger, B, Blichfeldt, T, Boink, G, Bugiwati, S R A, Cai, Z, Carolan, S, Clark, E, Cubric-Curik, V, Dagong, M I A, Dorji, T, Drew, L, Guo, J, Hallsson, J, Horvat, S, Kantanen, J, Kawaguchi, F, Kazymbet, P, Khayatzadeh, N, Kim, N, Shah, M K, Liao, Y, Martínez, A, Masangkay, J S, Masaoka, M, Mazza, R, McEwan, J, Milanesi, M, Faruque, M O, Nomura, Y, Ouchene-Khelifi, N-A, Pereira, F, Sahana, G, Salavati, M, Sasazaki, S, Da Silva, A, Simčič, M, Sölkner, J, Sutherland, A, Tigchelaar, J, Zhang, H, Consortium, E, Ajmone-Marsan, P, Bradley, D G, Colli, L, Drögemüller, C, Jiang, Y, Lei, C, Mannen, H, Pompanon, F, Tosser-Klopp, G & Lenstra, J A 2022, ' Geographical contrasts of Y-chromosomal haplogroups from wild and domestic goats reveal ancient migrations and recent introgressions ', Molecular Ecology, vol. 31, no. 16, pp. 4364-4380 . https://doi.org/10.1111/mec.16579
Clark, E & Salavati, M 2022, ' Geographical contrasts of Y-chromosomal haplogroups from wild and domestic goats reveal ancient migrations and recent introgressions ', Molecular Ecology, vol. 31, no. 16, pp. 4364-4380 . https://doi.org/10.1111/mec.16579
Molecular ecology, vol. 31, no. 16, pp. 4364-4380, 2022.
Molecular Ecology, 31(16), 4364. Blackwell Publishing Ltd

By their paternal transmission, Y-chromosomal haplotypes are sensitive markers of population history and male-mediated introgression. Previous studies identified biallelic single-nucleotide variants in the SRY, ZFY and DDX3Y genes, which in domestic

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8d7783310f25f9095ba744025e3057c1
https://boris.unibe.ch/171365/1/Vargoats2022-ChY.pdf

VarGoats project : a dataset of 1159 whole-genome sequences to dissect Capra hircus global diversity

Autor: Denoyelle, L., Talouarn, E., Bardou, P., Colli, L., Alberti, A., Danchin, C., Del Corvo, M., Engelen, S., Orvain, C., Palhiere, I., Rupp, R., Sarry, J., Salavati, M., Amills, M., Clark, E., Crepaldi, P., Faraut, T., Masiga, C. W., Pompanon, F., Rosen, B. D., Stella, A., Van Tassell, C. P., Tosser-Klopp, G., Kijas, J., Guldbrandtsen, B., Kantanen, J., Duby, D., Martin, P., Duclos, D., Allain, D., Arquet, R., Mandonnet, N., Naves, M., Carolan, S., Foran, M., Crisa, A., Marletta, D., Ottino, M., Randi, E., Benjelloun, B., Lenstra, H., Moaeen-ud-Din, M., Reecy, J., Goyache, F., Alvarez, I., Capote, J., Jordana, J., Pons, A., Martinez, A., Molina, A., Rosen, B., Drogemuller, C., Luikart, G., Mruttu, H. A., Gondwe, T., Sikosana, J., Taela, M. D. G., Nash, O.

Publikováno v: Denoyelle, Laure; Talouarn, Estelle; Bardou, Philippe; Colli, Licia; Alberti, Adriana; Danchin, Coralie; Del Corvo, Marcello; Engelen, Stéfan; Orvain, Céline; Palhière, Isabelle; Rupp, Rachel; Sarry, Julien; Salavati, Mazdak; Amills, Marcel; Clark, Emily; Crepaldi, Paola; Faraut, Thomas; Masiga, Clet Wandui; Pompanon, François; Rosen, Benjamin D; ... (2021). VarGoats project: a dataset of 1159 whole-genome sequences to dissect Capra hircus global diversity. Genetics, selection, evolution, 53(1), p. 86. BioMed Central 10.1186/s12711-021-00659-6
Genetics, Selection, Evolution : GSE
Genetics Selection Evolution, Vol 53, Iss 1, Pp 1-14 (2021)
Digital.CSIC. Repositorio Institucional del CSIC
instname
Genetics Selection Evolution
Genetics Selection Evolution, 2021, 53 (1), 14 p. ⟨10.1186/s12711-021-00659-6⟩
Genetics Selection Evolution, BioMed Central, 2021, 53 (1), 14 p. ⟨10.1186/s12711-021-00659-6⟩
Dipòsit Digital de Documents de la UAB
Universitat Autònoma de Barcelona
2021, ' VarGoats project : a dataset of 1159 whole-genome sequences to dissect Capra hircus global diversity ', Genetics Selection Evolution, vol. 53, no. 1, pp. 86 . https://doi.org/10.1186/s12711-021-00659-6

[Background]: Since their domestication 10,500 years ago, goat populations with distinctive genetic backgrounds have adapted to a broad variety of environments and breeding conditions. The VarGoats project is an international 1000-genome resequencing

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a3cc9f8829ee19c993f24cbdfa1e902d
https://ddd.uab.cat/record/265362

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Construction of bovine whole-genome radiation hybrid and linkage maps using high-throughput genotyping

Autor: McKay, S D, Schnabel, R D, Murdoch, B M, Aerts, J, Gill, C A, Gao, C, Li, C, Matukumalli, L K, Stothard, P, Wang, Z, Van Tassell, C P, Williams, J L, Taylor, J F, Moore, S S

Publikováno v: Animal Genetics

High-density whole-genome maps are essential for ordering genes or markers and aid in the assembly of genome sequence. To increase the density of markers on the bovine radiation hybrid map, and hence contribute to the assembly of the bovine genome se

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid________::b9eb26e0e1e845a1cda794ac9d01e277
http://europepmc.org/articles/PMC2063635