Zobrazeno 1 - 10
of 10
pro vyhledávání: '"Tang, Catherina"'
Autor:
Wan, Nathan, Weinberg, David, Tzu-Yu Liu, Niehaus, Katherine, Ariazi, Eric, Delubac, Daniel, Kannan, Ajay, White, Brandon, Bailey, Mitch, Bertin, Marvin, Boley, Nathan, Bowen, Derek, Cregg, James, Drake, Adam, Ennis, Riley, Fransen, Signe, Gafni, Erik, Hansen, Loren, Yaping Liu, Otte, Gabriel, Pecson, Jennifer, Rice, Brandon, Sanderson, Gabriel, Aarushi Sharma, John, John St., Tang, Catherina, Tzou, Abraham, Young, Leilani, Girish Putcha, Haque, Imran
Figure S1. Performance of confounding variable in k-fold and target CV procedure (ROC curves) for: a) Age and binned-age CV b) Batch and k-batch CV c) Processing date and ordered k-batch CV d) Institution and balanced k-batch CV. Note that stratifica
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ececf063b4d014078ea49ffc328d59f3
Autor:
Wan, Nathan, Weinberg, David, Tzu-Yu Liu, Niehaus, Katherine, Ariazi, Eric, Delubac, Daniel, Kannan, Ajay, White, Brandon, Bailey, Mitch, Bertin, Marvin, Boley, Nathan, Bowen, Derek, Cregg, James, Drake, Adam, Ennis, Riley, Fransen, Signe, Gafni, Erik, Hansen, Loren, Yaping Liu, Otte, Gabriel, Pecson, Jennifer, Rice, Brandon, Sanderson, Gabriel, Aarushi Sharma, John, John St., Tang, Catherina, Tzou, Abraham, Young, Leilani, Girish Putcha, Haque, Imran
Figure S2. Percentage of colorectal cancer samples by stage and non-cancer controls in each range of estimated TF (based on observed CNV using an IchorCNA-based estimate). (DOCX 74 kb)
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::704fcd93687fbefd936d6f48ea10b7ed
Autor:
Wan, Nathan, Weinberg, David, Tzu-Yu Liu, Niehaus, Katherine, Ariazi, Eric, Delubac, Daniel, Kannan, Ajay, White, Brandon, Bailey, Mitch, Bertin, Marvin, Boley, Nathan, Bowen, Derek, Cregg, James, Drake, Adam, Ennis, Riley, Fransen, Signe, Gafni, Erik, Hansen, Loren, Yaping Liu, Otte, Gabriel, Pecson, Jennifer, Rice, Brandon, Sanderson, Gabriel, Aarushi Sharma, John, John St., Tang, Catherina, Tzou, Abraham, Young, Leilani, Girish Putcha, Haque, Imran
Figure S3. IchorCNA-based estimated TF alone to predict case status (i.e., cancer or control) achieved an AUC of 0.67 in the IU age range, meaningfully lower than results from the ML model under any analyzed CV procedure. (DOCX 101 kb)
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::50bfb1e3002f7aa30c7016ef161bbb8e
Autor:
Wan, Nathan, Weinberg, David, Tzu-Yu Liu, Niehaus, Katherine, Ariazi, Eric, Delubac, Daniel, Kannan, Ajay, White, Brandon, Bailey, Mitch, Bertin, Marvin, Boley, Nathan, Bowen, Derek, Cregg, James, Drake, Adam, Ennis, Riley, Fransen, Signe, Gafni, Erik, Hansen, Loren, Yaping Liu, Otte, Gabriel, Pecson, Jennifer, Rice, Brandon, Sanderson, Gabriel, Aarushi Sharma, John, John St., Tang, Catherina, Tzou, Abraham, Young, Leilani, Girish Putcha, Haque, Imran
Figure S4. Non-linear relationship between the total number of samples used for training and sensitivity at 85% specificity for colorectal cancer detection. The method was trained again with k-fold, except the number of training samples per fold was
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4585ea7c18b7b46087c3a827f0cdf8f6
Akademický článek
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Autor:
Wan, Nathan, Weinberg, David, Liu, Tzu-yu, Niehaus, Katherine, Delubac, Daniel, Kannan, Ajay, White, Brandon, Ariazi, Eric A., Bailey, Mitch, Bertin, Marvin, Boley, Nathan, Bowen, Derek, Cregg, James, Drake, Adam, Ennis, Riley, Fransen, Signe, Gafni, Erik, Hansen, Loren, Liu, Yaping, Otte, Gabriel L., Pecson, Jennifer, Rice, Brandon, Sanderson, Gabriel E., Sharma, Aarushi, John, John St, Tang, Catherina, Tzou, Abe, Young, Leilani, Haque, Imran S., Putcha, Girish
Publikováno v:
In Gastroenterology May 2019 156(6) Supplement 1:S
Autor:
Wan, Nathan, Weinberg, David, Tzu-Yu Liu, Niehaus, Katherine, Ariazi, Eric, Delubac, Daniel, Kannan, Ajay, White, Brandon, Bailey, Mitch, Bertin, Marvin, Boley, Nathan, Bowen, Derek, Cregg, James, Drake, Adam, Ennis, Riley, Fransen, Signe, Gafni, Erik, Hansen, Loren, Yaping Liu, Otte, Gabriel, Pecson, Jennifer, Rice, Brandon, Sanderson, Gabriel, Aarushi Sharma, John, John St., Tang, Catherina, Tzou, Abraham, Young, Leilani, Girish Putcha, Haque, Imran
Supplemental Methods. (DOCX 26 kb)
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c5b64088eaef90fb9fb3b852157a8700
Autor:
Wan, Nathan, Weinberg, David, Tzu-Yu Liu, Niehaus, Katherine, Ariazi, Eric, Delubac, Daniel, Kannan, Ajay, White, Brandon, Bailey, Mitch, Bertin, Marvin, Boley, Nathan, Bowen, Derek, Cregg, James, Drake, Adam, Ennis, Riley, Fransen, Signe, Gafni, Erik, Hansen, Loren, Yaping Liu, Otte, Gabriel, Pecson, Jennifer, Rice, Brandon, Sanderson, Gabriel, Aarushi Sharma, John, John St., Tang, Catherina, Tzou, Abraham, Young, Leilani, Girish Putcha, Haque, Imran
Supplemental Methods. (DOCX 26 kb)
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::6c4cf810a27321536822cde9fcd50b0c
Autor:
Wan, Nathan, Weinberg, David, Tzu-Yu Liu, Niehaus, Katherine, Ariazi, Eric, Delubac, Daniel, Kannan, Ajay, White, Brandon, Bailey, Mitch, Bertin, Marvin, Boley, Nathan, Bowen, Derek, Cregg, James, Drake, Adam, Ennis, Riley, Fransen, Signe, Gafni, Erik, Hansen, Loren, Yaping Liu, Otte, Gabriel, Pecson, Jennifer, Rice, Brandon, Sanderson, Gabriel, Aarushi Sharma, John, John St., Tang, Catherina, Tzou, Abraham, Young, Leilani, Girish Putcha, Haque, Imran
Table S1. Mean and standard deviation of the number of samples (both in and out of the IU age range) per fold for each CV procedure. SDâ =â standard deviation. (DOCX 16 kb)
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::3ba862e44c4b17bd61cac89d9475efa0
Autor:
Wan, Nathan, Weinberg, David, Tzu-Yu Liu, Niehaus, Katherine, Ariazi, Eric, Delubac, Daniel, Kannan, Ajay, White, Brandon, Bailey, Mitch, Bertin, Marvin, Boley, Nathan, Bowen, Derek, Cregg, James, Drake, Adam, Ennis, Riley, Fransen, Signe, Gafni, Erik, Hansen, Loren, Yaping Liu, Otte, Gabriel, Pecson, Jennifer, Rice, Brandon, Sanderson, Gabriel, Aarushi Sharma, John, John St., Tang, Catherina, Tzou, Abraham, Young, Leilani, Girish Putcha, Haque, Imran
Table S1. Mean and standard deviation of the number of samples (both in and out of the IU age range) per fold for each CV procedure. SDâ =â standard deviation. (DOCX 16 kb)
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::139bfefd52c6e4761fbfbb26cd6f269c