The developing airway and gut microbiota in early life is influenced by age of older siblings

Autor: Emil Dalgaard Christensen, Mathis Hjort Hjelmsø, Jonathan Thorsen, Shiraz Shah, Tamsin Redgwell, Christina Egeø Poulsen, Urvish Trivedi, Jakob Russel, Shashank Gupta, Bo L. Chawes, Klaus Bønnelykke, Søren Johannes Sørensen, Morten Arendt Rasmussen, Hans Bisgaard, Jakob Stokholm

Publikováno v: Microbiome, Vol 10, Iss 1, Pp 1-15 (2022)

Abstract Background Growing up with siblings has been linked to numerous health outcomes and is also an important determinant for the developing microbiota. Nonetheless, research into the role of having siblings on the developing microbiota has mainl

Externí odkaz: https://doaj.org/article/347ae95770244240bc9cdf8161f74756

Hundreds of viral families in the healthy infant gut

Autor: Anders Pedersen, Morten Arendt Rasmussen, Jakob Stokholm, Jonathan Thorsen, Gisle Vestergaard, Josue Castro-Meija, Sylvain Moineau, Moïra B. Dion, François Enault, Romain Sausset, Ling Deng, Fie Olsen Romme, Marie-Agnès Petit, Eric Olo Ndela, Dennis Sandris Nielsen, Søren J. Sørensen, Tamsin Redgwell, Shiraz A. Shah, Yichang Zhang, Mathis Hjort Hjelmsø, Ronalds Silins, Hans Bisgaard

The gut microbiome (GM) is shaped through infancy and plays a major role in determining susceptibility to chronic inflammatory diseases later in life. Bacteriophages (phages) are known to modulate bacterial populations in numerous ecosystems, includi

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::30998ae37dfd9272695266c455dfcc8f
https://doi.org/10.21203/rs.3.rs-748587/v1

INfrastructure for a PHAge REference Database: Identification of large-scale biases in the current collection of phage genomes

Autor: Ryan Cook, Martha R. J. Clokie, Megan Barnes, Branko Rihtman, Andrew D. Millard, Jon L. Hobman, Michael Jones, Nathan Brown, Tamsin Redgwell, Dov J. Stekel

BackgroundWith advances in sequencing technology and decreasing costs, the number of bacteriophage genomes that have been sequenced has increased markedly in the last decade.Materials and MethodsWe developed an automated retrieval and analysis system

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::7dc8db0b453365e8a0612b1a49263fca
https://doi.org/10.1101/2021.05.01.442102

Metagenomics of the Viral Community in Three Cattle Slurry Samples

Autor: Slawomir Michniewski, Pavelas Sazinas, Aurelija M. Grigonyte, Amelia Brett, Jon L. Hobman, Andrew D. Millard, Rebecca Smith, Bethany Guck, Tamsin Redgwell, Steven P.T. Hooton, Branko Rihtman

Publikováno v: Microbiology Resource Announcements

The diversity of viruses in slurries from dairy farming remains largely uncharacterized. Here we report viral diversity found in cattle slurry from a dairy farm in the East Midlands in the United Kingdom.
The diversity of viruses in slurries fro

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::32da0a2bf3bea3badfa1fe200645316c
https://doi.org/10.1128/mra.01442-18

Comparative Genomics of Bacteriophage of the Genus Seuratvirus

Autor: Andrew D. Millard, David J. Scanlan, Jon L. Hobman, Pavelas Sazinas, Slawomir Michniewski, Aurelija M. Grigonyte, Branko Rihtman, Tamsin Redgwell

Publikováno v: Genome Biology and Evolution
Sazinas, P, Redgwell, T, Rihtman, B, Grigonyte, A, Michniewski, S, Scanlan, D J, Hobman, J & Millard, A 2017, ' Comparative Genomics of Bacteriophage of the Genus Seuratvirus ', Genome Biology and Evolution, vol. 10, no. 1, pp. 72-76 . https://doi.org/10.1093/gbe/evx275

Despite being more abundant and having smaller genomes than their bacterial host, relatively few bacteriophages have had their genomes sequenced. Here, we isolated 14 bacteriophages from cattle slurry and performed de novo genome sequencing, assembly

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::74b5d9fb419fb8c17fb0f0d82509c07a
https://pubmed.ncbi.nlm.nih.gov/29272407