A High-Density STS Map Based on a Single Contig of YAC and P1 Clones in the Chromosome 8p12–p21 Region

Autor: Noriaki Mitsuda, Lin Ye, Ikunoshin Kato, Tetsuro Miki, Jun Nakura, Yoshihiko Fujioka, Katsuyuki Hashimoto, Asako Takahashi-Fujii, Yi Zhao, Toshio Ogihara, Yoshizumi Ishino

Publikováno v: Genomics. 41:49-55

We have constructed a yeast artificial chromosome (YAC) and P1 contig in the 8p12–p21 region. The contig comprises 16 overlapping YAC clones and 44 overlapping P1 clones. Twelve dinucleotide-repeat polymorphic sequence-tagged site (STS) markers tha

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dcd17c9d5a547a4e44bfbea60e9e60b9
https://doi.org/10.1006/geno.1997.4619

Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes

Autor: Yuko Isono, Rie Otsuka, Shinichi Ishida, Takahiro Yoneyama, Keiichi Nagai, Riu Yamashita, Tomoyasu Sugiyama, Asako Takahashi-Fujii, Toshio Ota, Takahide Yokoi, Takao Isogai, Hiroyuki Wakaguri, Tomo-o Tanase, Yutaka Suzuki, Hiroshi Kondo, Tadashi Ishibashi, Katsuhiro Kanda, Shizuko Ishii, Masako Wagatsuma, Ai Wakamatsu, Sumio Sugano, Hisashi Kikuchi, Katsuki Tsuritani, Mitsuo Sekine, Junichi Yamamoto, Tetsuo Nishikawa, Kaoru Saito, Ryotaro Irie, Katsuji Murakawa, Norihiro Kushida, Kouichi Kimura, Kenta Nakai

Publikováno v: Genome research. 16(1)

By analyzing 1,780,295 5′-end sequences of human full-length cDNAs derived from 164 kinds of oligo-cap cDNA libraries, we identified 269,774 independent positions of transcriptional start sites (TSSs) for 14,628 human RefSeq genes. These TSSs were

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::724545534832eb80b6aa5703a5323484
https://pubmed.ncbi.nlm.nih.gov/16344560

Complete sequencing and characterization of 21,243 full-length human cDNAs

Autor: Yoko Yoshikawa, Hiroyo Kodaira, Akio Sugiyama, Kaoru Saito, Nobuo Nomura, Tsutomu Fujiwara, Naoko Katsuta, Shogo Moriya, Mitsuo Sekine, Tomoyasu Sugiyama, Hisatsugu Yuuki, Bunsei Kawakami, Sachiko Okamoto, Junichi Yamamoto, Koji Watanabe, Satoshi Aotsuka, Tadashi Satoh, Takami Komatsu, Yoshihiro Ohmori, Takao Iwayanagi, Akihiro Senoh, Machiko Tanikawa, Yasuko Ikema, Tomoko Hotuta, Takahide Yokoi, Naokazu Sasaki, Ryotaro Irie, Tatsunari Nishi, Sakae Togiya, Hirokazu Wakebe, Tadashi Senba, Yoshihiro Goto, Hiroshi Matsunawa, Yuko Terashima, Hiroshi Kondo, Katsue Yamada, Tetsuji Otsuki, Yasuhiko Masuho, Misato Morinaga, Hiroshi Mizoguchi, Makoto Takemoto, Asako Takahashi-Fujii, Kumiko Kamihara, Kiyomi Nakagawa, Saori Noguchi, Osamu Suzuki, Miho Arita, Susumu Hiraoka, Yuko Shirai, Kyoka Matsumura, Takeshi Watanabe, Kumi Abe, Hiromi Inagaki, Hiroyuki Sato, Manabu Watanabe, Ken Ninomiya, Yoshiyuki Chiba, Yusuke Nakamura, Shoko Itakura, Hiroko Momiyama, Emiko Kikkawa, Yuri Kawai, Yoshiko Nomura, Yoshie Nakajima, Hisashi Kikuchi, Manabu Kimata, Noriko Satoh, Yukiko Takahashi, Shinichi Ishida, Toshio Ota, Sachiko Takami, Tetsushi Yada, Atsushi Oshima, Reiko Hara, Keiko Shigeta, Takeshi Hikiji, Tetsuo Nishikawa, Hiroyuki Tanai, Satoshi Nakagawa, Ayako Kawabata, Kiyoshi Fujimori, Tadashi Ishibashi, Yoshiko Kaku, Yutaka Suzuki, Keiichi Nagai, Kouichi Ozaki, Takae Mizuno, Susumu Watanabe, Katsuhiro Kanda, Kazuha Takeuchi, Tomo-o Tanase, Katsuhiko Murakami, Masahide Sasaki, Makoto Yosida, Yasuhito Fukuzumi, Takehiko Hosoiri, Tomoko Itoh, Toshikazu Shibahara, Masaya Obayashi, Megumi Komiyama, Sumiyo Takiguchi, Koji Hayashi, Osamu Ohara, Hiroyuki Tashiro, Kazuomi Sato, Hiroto Hara, Makoto Yamazaki, Naoko Kobatake, Toshihiro Tanaka, Akiko Shiratori, Sanae Sano, Takuma Kawakami, Koji Okumura, Yoshifumi Fujimori, Masaaki Yamazaki, Kenji Nagahari, Sumio Sugano, Kouichi Kimura, Junko Kusano, Yukio Ono, Hiroaki Sudo, Takahiro Nagase, Fukuyo Komai, Yuko Isono, Haretsugu Hishigaki, Junko Mizushima-Sugano, Masako Wagatsuma, Fumio Shimizu, Hiroshi Makita, Yuka Fujii, Tatsuo Ichihara, Yuhi Omura, Tomohiro Yasuda, Kenta Nakai, Keiichi Kanehori, Shizuko Ishii, Takushi Togashi, Rie Okitani, Hiromichi Yamashita, Katsuji Murakawa, Akira Tanigami, Ai Wakamatsu, Namiko Shiohata, Kaoru Musashino, Ayako Kumagai, Toshihide Ono, Motoji Watanabe, Hiroko Hata, Yoshitaka Nakamura, Takako Furuya, Masaaki Oyama, Takao Isogai, Nobuyuki Imose, Masanori Sugawara, Makiko Takahashi, Riu Yamashita, Maasa Hirao

Publikováno v: Nature genetics. 36(1)

As a base for human transcriptome and functional genomics, we created the "full-length long Japan" (FLJ) collection of sequenced human cDNAs. We determined the entire sequence of 21,243 selected clones and found that 14,490 cDNAs (10,897 clusters) we

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1423d4e4322c993cbee2219dafdff70a
https://pubmed.ncbi.nlm.nih.gov/14702039

Six dinucleotide repeat polymorphisms on chromosome 7

Autor: Asako Takahashi-Fujii, Norio Niikawa, Toshio Ogihara, Tetsuro Miki, Yoshihiro Jinno, Noriaki Mitsuda, Tohru Ohta, Jun Nakura, Yoshizumi Ishino, Lin Ye

Publikováno v: Japanese Journal of Human Genetics. 39:447-449

Six polymorphic dinucleotide (CA) repeat clones isolated from a chromosome microdissection library were mapped to chromosome 7 using human-mouse cell hybrids and linkage analysis of 5 CEPH families.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3ba1a4c31b28dafa78097ce36506eb2e
https://doi.org/10.1007/bf01892393

Non-isotopic restriction mapping of cosmid DNA

Autor: A, Takahashi-Fujii, N, Maeda, Y, Ishino, H, Kotani, I, Kato

Publikováno v: BioTechniques. 16(5)

A protocol for the non-isotopic restriction mapping of cosmid DNA was developed. After digestion with lambda terminase and partial digestion with restriction enzymes, DNA fragments containing right or left cohesive cos termini were selectively captur

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid________::e3f674395dbf7df005ef15e806fe49e7
https://pubmed.ncbi.nlm.nih.gov/8068347