Zobrazeno 1 - 5
of 5
pro vyhledávání: '"TCGA Research Network"'
Autor:
Carrot-Zhang, Jian, Yao, Xiaotong, Devarakonda, Siddhartha, Deshpande, Aditya, Damrauer, Jeffrey S, Silva, Tiago Chedraoui, Wong, Christopher K, Choi, Hyo Young, Felau, Ina, Robertson, A Gordon, Castro, Mauro AA, Bao, Lisui, Rheinbay, Esther, Liu, Eric Minwei, Trieu, Tuan, Haan, David, Yau, Christina, Hinoue, Toshinori, Liu, Yuexin, Shapira, Ofer, Kumar, Kiran, Mungall, Karen L, Zhang, Hailei, Lee, Jake June-Koo, Berger, Ashton, Gao, Galen F, Zhitomirsky, Binyamin, Liang, Wen-Wei, Zhou, Meng, Moorthi, Sitapriya, Berger, Alice H, Collisson, Eric A, Zody, Michael C, Ding, Li, Cherniack, Andrew D, Getz, Gad, Elemento, Olivier, Benz, Christopher C, Stuart, Josh, Zenklusen, JC, Beroukhim, Rameen, Chang, Jason C, Campbell, Joshua D, Hayes, D Neil, Yang, Lixing, Laird, Peter W, Weinstein, John N, Kwiatkowski, David J, Tsao, Ming S, Travis, William D, Khurana, Ekta, Berman, Benjamin P, Hoadley, Katherine A, Robine, Nicolas, TCGA Research Network, Meyerson, Matthew, Govindan, Ramaswamy, Imielinski, Marcin
Publikováno v:
Cell reports, vol 34, iss 5
RTK/RAS/RAF pathway alterations (RPAs) are a hallmark of lung adenocarcinoma (LUAD). In this study, we use whole-genome sequencing (WGS) of 85 cases found to be RPA(���) by previous studies from The Cancer Genome Atlas (TCGA) to characterize th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9aaa915021375f3d300f731845bb6794
Autor:
Hmeljak, Julija, Sanchez-Vega, Francisco, Hoadley, Katherine A, Shih, Juliann, Stewart, Chip, Heiman, David, Tarpey, Patrick, Danilova, Ludmila, Drill, Esther, Gibb, Ewan A, Bowlby, Reanne, Kanchi, Rupa, Osmanbeyoglu, Hatice U, Sekido, Yoshitaka, Takeshita, Jumpei, Newton, Yulia, Graim, Kiley, Gupta, Manaswi, Gay, Carl M, Diao, Lixia, Gibbs, David L, Thorsson, Vesteinn, Iype, Lisa, Kantheti, Havish, Severson, David T, Ravegnini, Gloria, Desmeules, Patrice, Jungbluth, Achim A, Travis, William D, Dacic, Sanja, Chirieac, Lucian R, Galateau-Sallé, Françoise, Fujimoto, Junya, Husain, Aliya N, Silveira, Henrique C, Rusch, Valerie W, Rintoul, Robert C, Pass, Harvey, Kindler, Hedy, Zauderer, Marjorie G, Kwiatkowski, David J, Bueno, Raphael, Tsao, Anne S, Creaney, Jenette, Lichtenberg, Tara, Leraas, Kristen, Bowen, Jay, TCGA Research Network, Felau, Ina, Zenklusen, Jean Claude, Akbani, Rehan, Cherniack, Andrew D, Byers, Lauren A, Noble, Michael S, Fletcher, Jonathan A, Robertson, A Gordon, Shen, Ronglai, Aburatani, Hiroyuki, Robinson, Bruce W, Campbell, Peter, Ladanyi, Marc
Publikováno v:
Cancer discovery, vol 8, iss 12
Malignant pleural mesothelioma (MPM) is a highly lethal cancer of the lining of the chest cavity. To expand our understanding of MPM, we conducted a comprehensive integrated genomic study, including the most detailed analysis of BAP1 alterations to d
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e942e791804d6e604cbd3acba62fb1db
https://escholarship.org/uc/item/0515m295
https://escholarship.org/uc/item/0515m295
Autor:
Robertson, A Gordon, Kim, Jaegil, Al-Ahmadie, Hikmat, Bellmunt, Joaquim, Guo, Guangwu, Cherniack, Andrew D, Hinoue, Toshinori, Laird, Peter W, Hoadley, Katherine A, Akbani, Rehan, Castro, Mauro AA, Gibb, Ewan A, Kanchi, Rupa S, Gordenin, Dmitry A, Shukla, Sachet A, Sanchez-Vega, Francisco, Hansel, Donna E, Czerniak, Bogdan A, Reuter, Victor E, Su, Xiaoping, de Sa Carvalho, Benilton, Chagas, Vinicius S, Mungall, Karen L, Sadeghi, Sara, Pedamallu, Chandra Sekhar, Lu, Yiling, Klimczak, Leszek J, Zhang, Jiexin, Choo, Caleb, Ojesina, Akinyemi I, Bullman, Susan, Leraas, Kristen M, Lichtenberg, Tara M, Wu, Catherine J, Schultz, Nicholaus, Getz, Gad, Meyerson, Matthew, Mills, Gordon B, McConkey, David J, TCGA Research Network, Weinstein, John N, Kwiatkowski, David J, Lerner, Seth P
Publikováno v:
Cell, vol 171, iss 3
We report a comprehensive analysis of 412 muscle-invasive bladder cancers characterized by multiple TCGA analytical platforms. Fifty-eight genes were significantly mutated, and the overall mutational load was associated with APOBEC-signature mutagene
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::477e83d273b94c5bab12cc8cb94f4b5a
Autor:
Tirapelli, Daniel Pretti da Cunha, Cooper, Lee, Ling, Shiyun, Verhaak, Roel G.W., Zhang, Hailei, Wrensch, Margaret, Radenbaugh, Amie, Yung, W.K. Alfred, Grifford, Mia, Mikkelsen, Tom, Meyerson, Matthew, Huse, Jason, TCGA Research Network, Zoppoli, Pietro, Lau, Ching C., Barnholtz-Sloan, Jill S., Laird, Peter W., Akbani, Rehan, Anjum, Samreen, Noushmehr, Houtan, Zheng, Siyuan, Iavarone, Antonio, Malta, Tathiane, Rao, Ganesh, Rao, Aravind, Sabedot, Thais, Newton, Yulia, Carolotti, Jr., Carlos Gilberto, Rao, Arjun A., Pagnotta, Stefano, Gutmann, David, Manyam, Ganiraju, Poisson, Laila, Aldape, Kenneth, Rabadan, Raul, Murray, Bradley, Salama, Sofie, Barthel, Floris P., Haussler, David, Hess, Kenneth, Ceccarelli, Michele, Lehrman, Norman L., Cherniack, Andrew D., Morozova, Olena, Beroukhim, Rameen, Brat, Daniel J., Wang, Jiguang
Publikováno v:
Cell, vol 164, iss 3
Therapy development for adult diffuse glioma is hindered by incomplete knowledge of somatic glioma driving alterations and suboptimal disease classification. We defined the complete set of genes associated with 1,122 diffuse grade II-III-IV gliomas f
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::849cb071a489e7f85f6d0bf1399527be
https://escholarship.org/uc/item/507568tm
https://escholarship.org/uc/item/507568tm
Autor:
Ciriello, Giovanni, Gatza, Michael L, Beck, Andrew H, Wilkerson, Matthew D, Rhie, Suhn K, Pastore, Alessandro, Zhang, Hailei, McLellan, Michael, Yau, Christina, Kandoth, Cyriac, Bowlby, Reanne, Shen, Hui, Hayat, Sikander, Fieldhouse, Robert, Lester, Susan C, Tse, Gary MK, Factor, Rachel E, Collins, Laura C, Allison, Kimberly H, Chen, Yunn-Yi, Jensen, Kristin, Johnson, Nicole B, Oesterreich, Steffi, Mills, Gordon B, Cherniack, Andrew D, Robertson, Gordon, Benz, Christopher, Sander, Chris, Laird, Peter W, Hoadley, Katherine A, King, Tari A, TCGA Research Network, Perou, Charles M
Publikováno v:
Cell, vol 163, iss 2
Invasive lobular carcinoma (ILC) is the second most prevalent histologic subtype of invasive breast cancer. Here, we comprehensively profiled 817 breast tumors, including 127 ILC, 490 ductal (IDC), and 88 mixed IDC/ILC. Besides E-cadherin loss, the b
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______325::8eda412d53fd073713afdc57eaef5e26
https://escholarship.org/uc/item/4tp5z1nr
https://escholarship.org/uc/item/4tp5z1nr