Zobrazeno 1 - 10
of 126
pro vyhledávání: '"T. Martin Embley"'
Autor:
Kacper M. Sendra, Andrew K. Watson, Ekaterina Kozhevnikova, Anthony L. Moore, T. Martin Embley, Robert P. Hirt
Publikováno v:
PLoS Pathogens, Vol 18, Iss 12 (2022)
Mitosomes are highly reduced forms of mitochondria which have lost two of the ‘defining’ features of the canonical organelle, the mitochondrial genome, and the capacity to generate energy in the form of ATP. Mitosomes are found in anaerobic proti
Externí odkaz:
https://doaj.org/article/7294852915e04ec0805eabc6ba952627
Autor:
Sven-A. Freibert, Alina V. Goldberg, Christian Hacker, Sabine Molik, Paul Dean, Tom A. Williams, Sirintra Nakjang, Shaojun Long, Kacper Sendra, Eckhard Bill, Eva Heinz, Robert P. Hirt, John M Lucocq, T. Martin Embley, Roland Lill
Publikováno v:
Nature Communications, Vol 8, Iss 1, Pp 1-12 (2017)
The functions of the highly reduced mitochondria (mitosomes) of microsporidians are not well-characterized. Here, the authors show that theTrachipleistophora hominismitosome is the site of iron–sulfur cluster assembly and that its retention is like
Externí odkaz:
https://doaj.org/article/e78ff76691884b4cabe49d811630fe3d
Publikováno v:
Frontiers in Microbiology, Vol 9 (2018)
Many anaerobic ciliated protozoa contain organelles of mitochondrial ancestry called hydrogenosomes. These organelles generate molecular hydrogen that is consumed by methanogenic Archaea, living in endosymbiosis within many of these ciliates. Here we
Externí odkaz:
https://doaj.org/article/576403e770b54edaa3aa2a9c9b2f5ecc
Autor:
T Martin Embley
Publikováno v:
Genome biology and evolution. 14(11)
Autor:
Richard J. Boys, T. Martin Embley, Tom M. W. Nye, Svetlana Cherlin, Tom A. Williams, Sarah E. Heaps
Publikováno v:
Heaps, S E, Nye, T M W, Boys, R J, Williams, T, Cherlin, S & Embley, T M 2019, ' Generalizing rate heterogeneity across sites in statistical phylogenetics ', Statistical Modelling . https://doi.org/10.1177/1471082X18829937
Phylogenetics uses alignments of molecular sequence data to learn about evolutionary trees relating species. Along branches, sequence evolution is modelled using a continuous-time Markov process characterised by an instantaneous rate matrix. Early mo
Autor:
Peter G Foster, Dominik Schrempf, Gergely J Szöllősi, Tom A Williams, Cymon J Cox, T Martin Embley
Common molecular phylogenetic characteristics such as long branches and compositional heterogeneity can be problematic for phylogenetic reconstruction when using amino acid data. Recoding alignments to reduced alphabets before phylogenetic analysis h
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2730147996a7b31c43780112b52ce6bb
https://hdl.handle.net/10400.1/18697
https://hdl.handle.net/10400.1/18697
Publikováno v:
Nature Ecology & Evolution
Repositório Científico de Acesso Aberto de Portugal
Repositório Científico de Acesso Aberto de Portugal (RCAAP)
instacron:RCAAP
Nature ecology & evolution
Williams, T A, Cox, C J, Foster, P G, Szöllősi, G J & Embley, T M 2020, ' Phylogenomics provides robust support for a two-domains tree of life ', Nature Ecology and Evolution, vol. 4, pp. 138-147 . https://doi.org/10.1038/s41559-019-1040-x
Repositório Científico de Acesso Aberto de Portugal
Repositório Científico de Acesso Aberto de Portugal (RCAAP)
instacron:RCAAP
Nature ecology & evolution
Williams, T A, Cox, C J, Foster, P G, Szöllősi, G J & Embley, T M 2020, ' Phylogenomics provides robust support for a two-domains tree of life ', Nature Ecology and Evolution, vol. 4, pp. 138-147 . https://doi.org/10.1038/s41559-019-1040-x
Hypotheses about the origin of eukaryotic cells are classically framed within the context of a universal 'tree of life' based on conserved core genes. Vigorous ongoing debate about eukaryote origins is based on assertions that the topology of the tre
Autor:
Dominik Schrempf, T. Martin Embley, Cymon J. Cox, Tom A. Williams, Peter G. Foster, Gergely J. Szöllősi
Publikováno v:
Genome Biology and Evolution
Williams, T, Schrempf, D, Szöllősi, G J, Cox, C J, Foster, P G & Embley, T M 2021, ' Inferring the deep past from molecular data ', Genome Biology and Evolution, vol. 13, no. 5, evab067 . https://doi.org/10.1093/gbe/evab067
Williams, T, Schrempf, D, Szöllősi, G J, Cox, C J, Foster, P G & Embley, T M 2021, ' Inferring the deep past from molecular data ', Genome Biology and Evolution, vol. 13, no. 5, evab067 . https://doi.org/10.1093/gbe/evab067
There is an expectation that analyses of molecular sequences might be able to distinguish between alternative hypotheses for ancient relationships, but the phylogenetic methods used and types of data analyzed are of critical importance in any attempt
Autor:
Thijs J. G. Ettema, T. Martin Embley, William H Lewis, Kacper M Sendra, Anders E. Lind, Robert P. Hirt, Tom A. Williams, Genoveva F. Esteban, Henning Onsbring
Publikováno v:
Molecular Biology and Evolution 37 (2020) 2
Molecular Biology and Evolution
Molecular Biology and Evolution, 37(2), 524-539
Lewis, W, Lind, A, Sendra, K M, Onsbring, H, Williams, T, Esteban, G, Hirt, R P, Ettema, T J G & Embley, T M 2019, ' Convergent evolution of hydrogenosomes from mitochondria by gene transfer and loss ', Molecular Biology and Evolution . https://doi.org/10.1093/molbev/msz239
Molecular Biology and Evolution
Molecular Biology and Evolution, 37(2), 524-539
Lewis, W, Lind, A, Sendra, K M, Onsbring, H, Williams, T, Esteban, G, Hirt, R P, Ettema, T J G & Embley, T M 2019, ' Convergent evolution of hydrogenosomes from mitochondria by gene transfer and loss ', Molecular Biology and Evolution . https://doi.org/10.1093/molbev/msz239
Hydrogenosomes are H2-producing mitochondrial homologs found in some anaerobic microbial eukaryotes that provide a rare intracellular niche for H2-utilizing endosymbiotic archaea. Among ciliates, anaerobic and aerobic lineages are interspersed, demon
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cda88c09c02f7a74829aae7075c01a65
http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-408104
http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-408104
Autor:
T. Martin Embley, Richard J. Boys, Svetlana Cherlin, Sarah E. Heaps, Tom M. W. Nye, Tom A. Williams
Publikováno v:
Cherlin, S, Heaps, S E, Nye, T M W, Boys, R J, Williams, T A & Embley, T M 2018, ' The effect of nonreversibility on inferring rooted phylogenies ', Molecular Biology and Evolution, vol. 35, no. 4, msx294, pp. 984-1002 . https://doi.org/10.1093/molbev/msx294
Cherlin, S, Heaps, S E, Nye, T M W, Boys, R J, Williams, T A & Embley, T M 2018, ' The effect of nonreversibility on inferring rooted phylogenies ' Molecular Biology and Evolution, vol 35, no. 4, pp. 984-1002 . DOI: 10.1093/molbev/msx294
Molecular Biology and Evolution
Cherlin, S, Heaps, S E, Nye, T M W, Boys, R J, Williams, T A & Embley, T M 2018, ' The effect of nonreversibility on inferring rooted phylogenies ' Molecular Biology and Evolution, vol 35, no. 4, pp. 984-1002 . DOI: 10.1093/molbev/msx294
Molecular Biology and Evolution
Most phylogenetic models assume that the evolutionary process is stationary and reversible. In addition to being biologically improbable, these assumptions also impair inference by generating models under which the likelihood does not depend on the p