A comparative analysis of the putative regulatory regions in human genes for the alpha-subunit family of Na(+)-K+ ATPase

Autor: Iv, Malyshev, Da, Bessarab, Orlova MYu, Konstantin Petrukhin, Sv, Volik, Ne, Broude, Gs, Monastyrskaya, Nn, Modyanov, Ed, Sverdlov

Publikováno v: Europe PubMed Central

The sequences of a 1.5 kb long stretch of the 5' flanking region of the gene for the alpha 3 isoform of the catalytic subunit of human Na(+)-K+ ATPase (located on chromosome 19) and of more than a 2 kb stretch of the 5' flanking region of the gene fo

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::7eddf6bdbdfba95dfac0d89f53b66a6b
https://pubmed.ncbi.nlm.nih.gov/1655080

The long noncoding RNA landscape of neuroendocrine prostate cancer and its clinical implications.

Autor: Ramnarine VR; Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada., Alshalalfa M; GenomeDx Biosciences Inc., Vancouver, BC, Canada., Mo F; Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada., Nabavi N; Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada., Erho N; GenomeDx Biosciences Inc., Vancouver, BC, Canada., Takhar M; GenomeDx Biosciences Inc., Vancouver, BC, Canada., Shukin R; Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada., Brahmbhatt S; Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada., Gawronski A; Department of Computer Science, Simon Fraser University, Burnaby, BC, Canada., Kobelev M; Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada., Nouri M; Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada., Lin D; Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada.; Department of Experimental Therapeutics, BC Cancer Agency, Vancouver, BC, Canada., Tsai H; Department of Pathology, Johns Hopkins School of Medicine, Baltimore, MD, USA., Lotan TL; Department of Pathology, Johns Hopkins School of Medicine, Baltimore, MD, USA., Karnes RJ; Department of Urology, Mayo Clinic College of Medicine, Rochester, MN, USA., Rubin MA; Department of Pathology and Laboratory Medicine, Weill Cornell Cancer Center, Weill Cornell Medical College, New York, NY, USA., Zoubeidi A; Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada., Gleave ME; Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada., Sahinalp C; Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada.; Department of Computer Science, Indiana University, Bloomington, IN, USA., Wyatt AW; Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada., Volik SV; Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada., Beltran H; Department of Medicine, Weill Cornell Cancer Center, Weill Cornell Medical College, New York, NY, USA., Davicioni E; GenomeDx Biosciences Inc., Vancouver, BC, Canada., Wang Y; Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada.; Department of Experimental Therapeutics, BC Cancer Agency, Vancouver, BC, Canada., Collins CC; Vancouver Prostate Centre & Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada.

Publikováno v: GigaScience [Gigascience] 2018 Jun 01; Vol. 7 (6).

Whole-genome and Transcriptome Sequencing of Prostate Cancer Identify New Genetic Alterations Driving Disease Progression.

Autor: Ren S; Department of Urology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai, China., Wei GH; Biocenter Oulu, Faculty of Biochemistry and Molecular Medicine, University of Oulu, Oulu, Finland., Liu D; BGI-Shenzhen, Shenzhen, China; China National GeneBank-Shenzhen, BGI-Shenzhen, Shenzhen, China., Wang L; Division of Biomedical Statistics and Informatics, Mayo Clinic College of Medicine, Rochester, MN, USA., Hou Y; BGI-Shenzhen, Shenzhen, China; China National GeneBank-Shenzhen, BGI-Shenzhen, Shenzhen, China; State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China., Zhu S; BGI-Shenzhen, Shenzhen, China; China National GeneBank-Shenzhen, BGI-Shenzhen, Shenzhen, China; Division of Genomics and Bioinformatics, CUHK-BGI Innovation Institute of Trans-Omics, The Chinese University of Hong Kong, Hong Kong, China., Peng L; BGI-Shenzhen, Shenzhen, China; China National GeneBank-Shenzhen, BGI-Shenzhen, Shenzhen, China; BGI Education Center, University of Chinese Academy of Sciences, Shenzhen, China., Zhang Q; Biocenter Oulu, Faculty of Biochemistry and Molecular Medicine, University of Oulu, Oulu, Finland., Cheng Y; BGI-Shenzhen, Shenzhen, China; Division of Genomics and Bioinformatics, CUHK-BGI Innovation Institute of Trans-Omics, The Chinese University of Hong Kong, Hong Kong, China., Su H; BGI-Shenzhen, Shenzhen, China; China National GeneBank-Shenzhen, BGI-Shenzhen, Shenzhen, China., Zhou X; BGI-Shenzhen, Shenzhen, China; China National GeneBank-Shenzhen, BGI-Shenzhen, Shenzhen, China., Zhang J; BGI-Shenzhen, Shenzhen, China., Li F; BGI-Shenzhen, Shenzhen, China; China National GeneBank-Shenzhen, BGI-Shenzhen, Shenzhen, China., Zheng H; BGI-Shenzhen, Shenzhen, China., Zhao Z; BGI-Shenzhen, Shenzhen, China; China National GeneBank-Shenzhen, BGI-Shenzhen, Shenzhen, China; School of Biological Science and Medical Engineering, Southeast University, Nanjing, China; State Key Laboratory of Bioelectronics, Southeast University, Nanjing, China., Yin C; Department of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China., He Z; BGI-Shenzhen, Shenzhen, China., Gao X; Department of Urology, The Third Affiliated Hospital of Sun Yat-Sen University, Guangzhou, China., Zhau HE; Uro-Oncology Research Program, Department of Medicine, Samuel Oschin Comprehensive Cancer Institute, Cedars-Sinai Medical Center, Los Angeles, CA, USA., Chu CY; Uro-Oncology Research Program, Department of Medicine, Samuel Oschin Comprehensive Cancer Institute, Cedars-Sinai Medical Center, Los Angeles, CA, USA., Wu JB; Uro-Oncology Research Program, Department of Medicine, Samuel Oschin Comprehensive Cancer Institute, Cedars-Sinai Medical Center, Los Angeles, CA, USA., Collins C; Vancouver Prostate Centre and Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada., Volik SV; Vancouver Prostate Centre and Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada., Bell R; Vancouver Prostate Centre and Department of Urologic Sciences, University of British Columbia, Vancouver, BC, Canada., Huang J; Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California, Los Angeles, CA, USA., Wu K; BGI-Shenzhen, Shenzhen, China; China National GeneBank-Shenzhen, BGI-Shenzhen, Shenzhen, China., Xu D; Department of Urology, Changzheng Hospital, Second Military Medical University, Shanghai, China., Ye D; Department of Urology, Fudan University Shanghai Cancer Center, Shanghai, China., Yu Y; Department of Pathology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai, China., Zhu L; Department of Urology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai, China., Qiao M; Department of Urology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai, China., Lee HM; Biocenter Oulu, Faculty of Biochemistry and Molecular Medicine, University of Oulu, Oulu, Finland., Yang Y; Biocenter Oulu, Faculty of Biochemistry and Molecular Medicine, University of Oulu, Oulu, Finland., Zhu Y; Department of Urology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai, China., Shi X; Department of Urology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai, China., Chen R; Department of Urology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai, China., Wang Y; Department of Pathology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai, China., Xu W; Department of Urology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai, China., Cheng Y; Department of Urology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai, China., Xu C; Department of Urology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai, China., Gao X; Department of Urology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai, China., Zhou T; Department of Urology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai, China., Yang B; Department of Urology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai, China., Hou J; Department of Urology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai, China., Liu L; BGI-Shenzhen, Shenzhen, China., Zhang Z; Department of Urology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai, China., Zhu Y; Department of Urology, Fudan University Shanghai Cancer Center, Shanghai, China., Qin C; Department of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China., Shao P; Department of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China., Pang J; Department of Urology, The Third Affiliated Hospital of Sun Yat-Sen University, Guangzhou, China., Chung LWK; Uro-Oncology Research Program, Department of Medicine, Samuel Oschin Comprehensive Cancer Institute, Cedars-Sinai Medical Center, Los Angeles, CA, USA., Xu J; State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China; Program for Personalized Cancer Care, NorthShore University HealthSystem, Evanston, IL, USA., Wu CL; Department of Pathology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA., Zhong W; Department of Urology, Guangdong Key Laboratory of Clinical Molecular Medicine and Diagnostics, Guangzhou First People's Hospital, Guangzhou Medical University, Guangzhou, China., Xu X; BGI-Shenzhen, Shenzhen, China; China National GeneBank-Shenzhen, BGI-Shenzhen, Shenzhen, China., Li Y; BGI-Shenzhen, Shenzhen, China., Zhang X; BGI-Shenzhen, Shenzhen, China., Wang J; BGI-Shenzhen, Shenzhen, China; James D. Watson Institute of Genome Sciences, Hangzhou, China., Yang H; BGI-Shenzhen, Shenzhen, China; James D. Watson Institute of Genome Sciences, Hangzhou, China., Wang J; BGI-Shenzhen, Shenzhen, China; Department of Biology, University of Copenhagen, Copenhagen, Denmark; The Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark; King Abdulaziz University, Jeddah, Saudi Arabia., Huang H; Department of Biochemistry and Molecular Biology, Mayo Clinic College of Medicine, Rochester, MN, USA., Sun Y; Department of Urology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai, China. Electronic address: sunyhsmmu@126.com.

Publikováno v: European urology [Eur Urol] 2018 Mar; Vol. 73 (3), pp. 322-339. Date of Electronic Publication: 2017 Sep 18.

SiNVICT: ultra-sensitive detection of single nucleotide variants and indels in circulating tumour DNA.

Autor: Kockan C; School of Computing Science.; MADD-Gen Graduate Program, Simon Fraser University, Burnaby, (BC), V5A 1S6, Canada., Hach F; School of Computing Science.; Vancouver Prostate Centre, Vancouver, BC V6H 3Z6, Canada., Sarrafi I; School of Computing Science., Bell RH; Vancouver Prostate Centre, Vancouver, BC V6H 3Z6, Canada., McConeghy B; Vancouver Prostate Centre, Vancouver, BC V6H 3Z6, Canada., Beja K; Vancouver Prostate Centre, Vancouver, BC V6H 3Z6, Canada., Haegert A; Vancouver Prostate Centre, Vancouver, BC V6H 3Z6, Canada., Wyatt AW; Vancouver Prostate Centre, Vancouver, BC V6H 3Z6, Canada.; Department of Urologic Sciences, University of British Columbia, Vancouver, BC V6T 1Z4, Canada., Volik SV; Vancouver Prostate Centre, Vancouver, BC V6H 3Z6, Canada., Chi KN; Department of Urologic Sciences, University of British Columbia, Vancouver, BC V6T 1Z4, Canada., Collins CC; Vancouver Prostate Centre, Vancouver, BC V6H 3Z6, Canada.; Department of Urologic Sciences, University of British Columbia, Vancouver, BC V6T 1Z4, Canada., Sahinalp SC; School of Computing Science.; Department of Urologic Sciences, University of British Columbia, Vancouver, BC V6T 1Z4, Canada.; School of Informatics and Computing, Indiana University, Bloomington, IN 47405, USA.

Publikováno v: Bioinformatics (Oxford, England) [Bioinformatics] 2017 Jan 01; Vol. 33 (1), pp. 26-34. Date of Electronic Publication: 2016 Aug 16.

Functional analysis of androgen receptor mutations that confer anti-androgen resistance identified in circulating cell-free DNA from prostate cancer patients.

Autor: Lallous N; Vancouver Prostate Centre, University of British Columbia, 2660 Oak St., Vancouver, BC, V6H 3Z6, Canada. nlallous@prostatecentre.com., Volik SV; Vancouver Prostate Centre, University of British Columbia, 2660 Oak St., Vancouver, BC, V6H 3Z6, Canada. svolik@prostatecentre.com.; Laboratory for Advanced Genome Analysis (LAGA), Vancouver Prostate Centre, 2660 Oak St., Vancouver, BC, V6H 3Z6, Canada. svolik@prostatecentre.com., Awrey S; Vancouver Prostate Centre, University of British Columbia, 2660 Oak St., Vancouver, BC, V6H 3Z6, Canada. sawrey@prostatecentre.com., Leblanc E; Vancouver Prostate Centre, University of British Columbia, 2660 Oak St., Vancouver, BC, V6H 3Z6, Canada. eleblanc@prostatecentre.com., Tse R; Vancouver Prostate Centre, University of British Columbia, 2660 Oak St., Vancouver, BC, V6H 3Z6, Canada. rst2@sfu.ca., Murillo J; Vancouver Prostate Centre, University of British Columbia, 2660 Oak St., Vancouver, BC, V6H 3Z6, Canada. jmurillo@prostatecentre.com., Singh K; Vancouver Prostate Centre, University of British Columbia, 2660 Oak St., Vancouver, BC, V6H 3Z6, Canada. ksingh@prostatecentre.com., Azad AA; Department of Medical Oncology, BC Cancer Agency, 600 West 10th Avenue, Vancouver, BC, V5Z 4E6, Canada. Arun.Azad@bccancer.bc.ca., Wyatt AW; Vancouver Prostate Centre, University of British Columbia, 2660 Oak St., Vancouver, BC, V6H 3Z6, Canada. awyatt@prostatecentre.com., LeBihan S; Vancouver Prostate Centre, University of British Columbia, 2660 Oak St., Vancouver, BC, V6H 3Z6, Canada. slebihan@prostatecentre.com.; Laboratory for Advanced Genome Analysis (LAGA), Vancouver Prostate Centre, 2660 Oak St., Vancouver, BC, V6H 3Z6, Canada. slebihan@prostatecentre.com., Chi KN; Department of Medical Oncology, BC Cancer Agency, 600 West 10th Avenue, Vancouver, BC, V5Z 4E6, Canada. kchi@bccancer.bc.ca., Gleave ME; Vancouver Prostate Centre, University of British Columbia, 2660 Oak St., Vancouver, BC, V6H 3Z6, Canada. mgleave@prostatecentre.com., Rennie PS; Vancouver Prostate Centre, University of British Columbia, 2660 Oak St., Vancouver, BC, V6H 3Z6, Canada. prennie@prostatecentre.com., Collins CC; Vancouver Prostate Centre, University of British Columbia, 2660 Oak St., Vancouver, BC, V6H 3Z6, Canada. ccollins@prostatecentre.com.; Laboratory for Advanced Genome Analysis (LAGA), Vancouver Prostate Centre, 2660 Oak St., Vancouver, BC, V6H 3Z6, Canada. ccollins@prostatecentre.com., Cherkasov A; Vancouver Prostate Centre, University of British Columbia, 2660 Oak St., Vancouver, BC, V6H 3Z6, Canada. artc@interchange.ubc.ca.

Publikováno v: Genome biology [Genome Biol] 2016 Jan 26; Vol. 17, pp. 10. Date of Electronic Publication: 2016 Jan 26.