Zobrazeno 1 - 10 of 12 pro vyhledávání: '"Susete Alves Carvalho"'
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Akademický článek
Rhizocarpon geographicum Lichen Discloses a Highly Diversified Microbiota Carrying Antibiotic Resistance and Persistent Organic Pollutant Tolerance
Autor: Alice Miral, Adam Kautsky, Susete Alves-Carvalho, Ludovic Cottret, Anne-Yvonne Guillerm-Erckelboudt, Manon Buguet, Isabelle Rouaud, Sylvain Tranchimand, Sophie Tomasi, Claudia Bartoli
Publikováno v: Microorganisms, Vol 10, Iss 9, p 1859 (2022)
As rock inhabitants, lichens are exposed to extreme and fluctuating abiotic conditions associated with poor sources of nutriments. These extreme conditions confer to lichens the unique ability to develop protective mechanisms. Consequently, lichen-as
Externí odkaz: https://doaj.org/article/53d815db8354496eba368e04c6ae9818
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4
AskoR, A R Package for Easy RNASeq Data Analysis
Autor: Fabrice Legeai, Susete Alves-Carvalho, Kévin Gazengel, Anthony Bretaudeau, Stéphanie Robin, Stéphanie Daval
Publikováno v: IECE 2021-1st International Electronic Conference on Entomology
IECE 2021-1st International Electronic Conference on Entomology, Jul 2021, Virtual, France. pp.1-8, ⟨10.3390/IECE-10646⟩
International audience; For facilitating the process of transcriptomics data, and to guarantee the reproducibility of our analyses, we developed AskoR, which is a R library for performing a suite of statistical analysisand graphical output from gene
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::97cfb7886eef998c3ae715be5012e003
https://hal.inrae.fr/hal-03347665
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5
SNP discovery and genetic mapping using genotyping by sequencing of whole genome genomic DNA from a pea RIL population
Autor: Gilles Boutet, Olivier Bouchez, Alain Baranger, Nathalie Rivière, Matthieu Falque, Susete Alves Carvalho, Clément Lavaud, Emeline Lhuillier, Pierre Peterlongo, Marie-Laure Pilet-Nayel
Publikováno v: BMC Genomics
BMC Genomics, BioMed Central, 2016, 17 (1), pp.121. ⟨10.1186/s12864-016-2447-2⟩
BMC Genomics 1 (17), . (2016)
BMC Genomics, 2016, 17 (1), pp.121. ⟨10.1186/s12864-016-2447-2⟩
Background Progress in genetics and breeding in pea still suffers from the limited availability of molecular resources. SNP markers that can be identified through affordable sequencing processes, without the need for prior genome reduction or a refer
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c83b3532c947b54d4ff8a5778438df8c
https://hal.inria.fr/hal-01275696/file/12864_2016_Article_2447.pdf
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6
Colib’read on galaxy: a tools suite dedicated to biological information extraction from raw NGS reads
Autor: Eric Rivals, Bastien Cazaux, Gustavo Sacomoto, Leena Salmela, Camille Marchet, Yvan Le Bras, Raluca Uricaru, Olivier Collin, Alexan Andrieux, Cyril Monjeaud, Susete Alves-Carvalho, Amal Zine El Aabidine, Vincent Miele, Claire Lemaitre, Pierre Peterlongo, Vincent Lacroix
Publikováno v: GigaScience
GigaScience, BioMed Central, 2016, 5 (1), ⟨10.1186/s13742-015-0105-2⟩
GigaScience, 2016, 5 (1), ⟨10.1186/s13742-015-0105-2⟩
Background With next-generation sequencing (NGS) technologies, the life sciences face a deluge of raw data. Classical analysis processes for such data often begin with an assembly step, needing large amounts of computing resources, and potentially re
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fb7800c26f76a6a584f27a47e0a14f69
https://hal.inria.fr/hal-01280238/document
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7
De novo construction of a 'Gene-space' for diploid plant genome rich in repetitive sequences by an iterative Process of Extraction and Assembly of NGS reads (iPEA protocol) with limited computing resources
Autor: Judith Burstin, Christelle Aluome, Dominique Brunel, Susete Alves Carvalho, Marie-Christine Le Paslier, Grégoire Aubert
Publikováno v: BMC Research Notes 1 (9), 1-9. (2016)
BMC Research Notes
BMC Research Notes, BioMed Central, 2016, 9 (1), pp.1-9. ⟨10.1186/s13104-016-1903-z⟩
Background The continuing increase in size and quality of the “short reads” raw data is a significant help for the quality of the assembly obtained through various bioinformatics tools. However, building a reference genome sequence for most plant
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::53051b10575806fdbf038dead5513d20
http://prodinra.inra.fr/record/367991
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8
Génétique et génomique du pois : what else ?
Autor: Judith Burstin, Tayeh, Nadim N., Anthony Klein, Virginie Bourion, Jonathan Kreplak, Françoise Jacquin, Susete Alves Carvalho, Christelle Aluome, Sebastien Carrere, Jerome Gouzy, Corinne Cruaud, Gérard Duc, Pascal Gamas, Brunel, Dominique D., Matthieu Falque, Marie-Christine Le Paslier, Patrick Wincker, Aubert, Gregoire G.
Publikováno v: Trésor des fèves et fleur des pois, le génie des légumineuses. Colloque scientifique SNHF Société Nationale d'Horticulture de France
Trésor des fèves et fleur des pois, le génie des légumineuses. Colloque scientifique SNHF Société Nationale d'Horticulture de France, May 2016, Paris, France. Société Nationale d'Horticulture de France, pp.33-37, 2016, 978-2-913793-16-3
Trésor des fèves et fleur des pois, le génie des légumineuses. Colloque scientifique SNHF Société Nationale d'Horticulture de France, Paris, FRA, 2016-05-20
Société Nationale d'Horticulture de France, pp.33-37, 2016, 978-2-913793-16-3
HAL
National audience
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::d9d8c8983434da4efd0fa38e783876e9
https://hal.inrae.fr/hal-02794125/document
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9
Pea genomic tools for functional and structural approaches
Autor: Nadim Tayeh, Susete Alves Carvalho, Christelle Aluome, Sébastien Carrere, Jonathan Kreplak, Anthony Klein, Matthieu Falque, Corinne Cruaud, Pauline Salloignon, Caroline Truntzer, Jerome Gouzy, Patrick Wincker, Marie-Christine Le Paslier, Dominique Brunel, Gregoire Aubert
Publikováno v: Mendel's legacy-150 years of the genius of genetics
Mendel's legacy-150 years of the genius of genetics, Masaryk University. CZE., Sep 2015, Brno, Czech Republic
HAL
2015; Mendel's legacy-150 years of the genius of genetics, Brno, CZE, 2015-09-07-2015-09-10, 33
BAP Geapsi; International audience
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::979f7724549c162cd9bf7121d6e917fc
https://hal.inrae.fr/hal-02743963/document
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10
Full-length de novo assembly of RNA-seq data in pea (Pisum sativum L.) provides a gene expression atlas and gives insights into root nodulation in this species
Autor: Anthony Klein, Judith Burstin, Patrick Wincker, Karen Boucherot, Corinne Cruaud, Françoise Jacquin, Sandra Moreau, Susete Alves-Carvalho, Jonathan Kreplak, Sébastien Carrère, Grégoire Aubert, Jérôme Gouzy, Anne-Lise Brochot, Pascal Gamas, Chantal Martin, Corinne Da Silva
Publikováno v: Plant Journal
Plant Journal, Wiley, 2015, 84 (1), pp.1-19. ⟨10.1111/tpj.12967⟩
Next-generation sequencing technologies allow an almost exhaustive survey of the transcriptome, even in species with no available genome sequence. To produce a Unigene set representing most of the expressed genes of pea, 20 cDNA libraries produced fr
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0b92dfe2912221caf2839c0e13177e3c
https://hal.inrae.fr/hal-02631162
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