Zobrazeno 1 - 10
of 49
pro vyhledávání: '"Susanne M Rafelski"'
Autor:
Tatsuhisa Tsuboi, Matheus P Viana, Fan Xu, Jingwen Yu, Raghav Chanchani, Ximena G Arceo, Evelina Tutucci, Joonhyuk Choi, Yang S Chen, Robert H Singer, Susanne M Rafelski, Brian M Zid
Publikováno v:
eLife, Vol 9 (2020)
Mitochondria are dynamic organelles that must precisely control their protein composition according to cellular energy demand. Although nuclear-encoded mRNAs can be localized to the mitochondrial surface, the importance of this localization is unclea
Externí odkaz:
https://doaj.org/article/50c39e2aaf1d4fd7a576af5169521570
Autor:
Claire McQuin, Allen Goodman, Vasiliy Chernyshev, Lee Kamentsky, Beth A Cimini, Kyle W Karhohs, Minh Doan, Liya Ding, Susanne M Rafelski, Derek Thirstrup, Winfried Wiegraebe, Shantanu Singh, Tim Becker, Juan C Caicedo, Anne E Carpenter
Publikováno v:
PLoS Biology, Vol 16, Iss 7, p e2005970 (2018)
CellProfiler has enabled the scientific research community to create flexible, modular image analysis pipelines since its release in 2005. Here, we describe CellProfiler 3.0, a new version of the software supporting both whole-volume and plane-wise a
Externí odkaz:
https://doaj.org/article/858648fc1f0a434e88a1227131207d19
Publikováno v:
PLoS Computational Biology, Vol 5, Iss 7, p e1000434 (2009)
Listeria monocytogenes is a pathogenic bacterium that moves within infected cells and spreads directly between cells by harnessing the cell's dendritic actin machinery. This motility is dependent on expression of a single bacterial surface protein, A
Externí odkaz:
https://doaj.org/article/87a162103bb84beda633543d83348088
Autor:
Matheus P. Viana, Jianxu Chen, Theo A. Knijnenburg, Ritvik Vasan, Calysta Yan, Joy E. Arakaki, Matte Bailey, Ben Berry, Antoine Borensztejn, Eva M. Brown, Sara Carlson, Julie A. Cass, Basudev Chaudhuri, Kimberly R. Cordes Metzler, Mackenzie E. Coston, Zach J. Crabtree, Steve Davidson, Colette M. DeLizo, Shailja Dhaka, Stephanie Q. Dinh, Thao P. Do, Justin Domingus, Rory M. Donovan-Maiye, Alexandra J. Ferrante, Tyler J. Foster, Christopher L. Frick, Griffin Fujioka, Margaret A. Fuqua, Jamie L. Gehring, Kaytlyn A. Gerbin, Tanya Grancharova, Benjamin W. Gregor, Lisa J. Harrylock, Amanda Haupt, Melissa C. Hendershott, Caroline Hookway, Alan R. Horwitz, H. Christopher Hughes, Eric J. Isaac, Gregory R. Johnson, Brian Kim, Andrew N. Leonard, Winnie W. Leung, Jordan J. Lucas, Susan A. Ludmann, Blair M. Lyons, Haseeb Malik, Ryan McGregor, Gabe E. Medrash, Sean L. Meharry, Kevin Mitcham, Irina A. Mueller, Timothy L. Murphy-Stevens, Aditya Nath, Angelique M. Nelson, Sandra A. Oluoch, Luana Paleologu, T. Alexander Popiel, Megan M. Riel-Mehan, Brock Roberts, Lisa M. Schaefbauer, Magdalena Schwarzl, Jamie Sherman, Sylvain Slaton, M. Filip Sluzewski, Jacqueline E. Smith, Youngmee Sul, Madison J. Swain-Bowden, W. Joyce Tang, Derek J. Thirstrup, Daniel M. Toloudis, Andrew P. Tucker, Veronica Valencia, Winfried Wiegraebe, Thushara Wijeratna, Ruian Yang, Rebecca J. Zaunbrecher, Ramon Lorenzo D. Labitigan, Adrian L. Sanborn, Graham T. Johnson, Ruwanthi N. Gunawardane, Nathalie Gaudreault, Julie A. Theriot, Susanne M. Rafelski
Publikováno v:
Nature. 613:345-354
Understanding how a subset of expressed genes dictates cellular phenotype is a considerable challenge owing to the large numbers of molecules involved, their combinatorics and the plethora of cellular behaviours that they determine1,2. Here we reduce
Autor:
Susan Ludmann, John Paul Thottam, Sara Carlson, Tanya Grancharova, Kaytlyn Gerbin, Jacqueline A. M. Smith, Antoine Borenzstejn, Jamie Gehring, Margaret A. Fuqua, Stephanie Dinh, Youngmee Sul, Rebecca Zaunbrecher, Amanda Haupt, Susanne M. Rafelski, Christopher L. Frick, Daniel Toloudis, Graham Johnson, Angelique Nelson, Brock Roberts, Ru Gunawardane, Joy Arakaki, Irina Mueller, Caroline Hookway
Publikováno v:
The FASEB Journal. 35
Autor:
Veronica Valencia, Tanya Grancharova, Kaytlyn A. Gerbin, Angelique M. Nelson, Margaret A. Fuqua, Melissa C. Hendershott, Amanda Haupt, Ruian Yang, Jamie L. Gehring, Joy Arakaki, Haseeb Malik, Susanne M. Rafelski, Andrew Tucker, Susan A. Ludmann, Caroline Hookway, Brock Roberts, Ruwanthi N. Gunawardane
Publikováno v:
Stem Cell Reports, Vol 12, Iss 5, Pp 1145-1158 (2019)
Summary: We describe a multistep method for endogenous tagging of transcriptionally silent genes in human induced pluripotent stem cells (hiPSCs). A monomeric EGFP (mEGFP) fusion tag and a constitutively expressed mCherry fluorescence selection casse
Autor:
Joy Arakaki, Winnie W. Leung, Melissa C. Hendershott, W. Joyce Tang, Nathalie Gaudreault, Winfried Wiegraebe, Margaret A. Fuqua, Antoine Borensztejn, Susanne M. Rafelski, Mackenzie E. Coston, Angelique M. Nelson, Benjamin W. Gregor, Thao P. Do, Irina A. Mueller, Amanda Haupt, Derek Thirstrup, Ruwanthi N. Gunawardane, Calysta Yan, Madison J. Swain-Bowden
Our goal is to identify and understand cellular behaviors using 3D live imaging of cell organization. To do this, we image human inducible pluripotent stem cell (hiPSC) lines expressing fluorescently tagged protein representing specific cellular orga
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::8fb9f4207060c39cb061746f35fe0d56
https://doi.org/10.1101/2020.12.18.423371
https://doi.org/10.1101/2020.12.18.423371
Autor:
Evelina Tutucci, Fan Xu, Susanne M. Rafelski, Joonhyuk Choi, Ximena G. Arceo, Brian M. Zid, Raghav Chanchani, Robert H. Singer, Jingwen Yu, Yang S. Chen, Matheus P. Viana, Tatsuhisa Tsuboi
Publikováno v:
eLife, Vol 9 (2020)
Tsuboi, T, Viana, M P, Xu, F, Yu, J, Chanchani, R, Arceo, X G, Tutucci, E, Choi, J, Chen, Y S, Singer, R H, Rafelski, S M & Zid, B M 2020, ' Mitochondrial volume fraction and translation duration impact mitochondrial mRNA localization and protein synthesis ', eLife, vol. 9, e57814, pp. 1-24 . https://doi.org/10.7554/eLife.57814, https://doi.org/10.7554/ELIFE.57814
eLife, 9:e57814, 1-24. eLife Sciences Publications
eLife
Tsuboi, T, Viana, M P, Xu, F, Yu, J, Chanchani, R, Arceo, X G, Tutucci, E, Choi, J, Chen, Y S, Singer, R H, Rafelski, S M & Zid, B M 2020, ' Mitochondrial volume fraction and translation duration impact mitochondrial mRNA localization and protein synthesis ', eLife, vol. 9, e57814, pp. 1-24 . https://doi.org/10.7554/eLife.57814, https://doi.org/10.7554/ELIFE.57814
eLife, 9:e57814, 1-24. eLife Sciences Publications
eLife
Mitochondria are dynamic organelles that must precisely control their protein composition according to cellular energy demand. Although nuclear-encoded mRNAs can be localized to the mitochondrial surface, the importance of this localization is unclea
Autor:
Raghav Chanchani, Yang S. Chen, Joonhyuk Choi, Ximena G. Arceo, Brian M. Zid, Tatsuhisa Tsuboi, Fan Xu, Evelina Tutucci, Jingwen Yu, Susanne M. Rafelski, Matheus P. Viana, Robert H. Singer
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::a1da7f29bf578b1e60e8f41839141295
https://doi.org/10.7554/elife.57814.sa2
https://doi.org/10.7554/elife.57814.sa2
Autor:
Ruwanthi N. Gunawardane, Kimberly R. Cordes Metzler, Angelique M. Nelson, Georg Seelig, M. Filip Sluzewski, Jamie L. Gehring, Melissa C. Hendershott, Theo A. Knijnenburg, Sean P. Palecek, Charles M. Roco, Kaytlyn A. Gerbin, Stephanie Q. Dinh, Jackson M. Brown, Aditya Nath, Gregory R. Johnson, Julie A. Theriot, Matthew Hirano, Vilas Menon, Tanya Grancharova, Susanne M. Rafelski, Nathalie Gaudreault, Alexander B. Rosenberg, Rebecca J. Zaunbrecher, Calysta Yan, Rory Donovan-Maiye, Matheus P. Viana
SummaryWe present a quantitative co-analysis of RNA abundance and sarcomere organization in single cells and an integrated framework to predict subcellular organization states from gene expression. We used human induced pluripotent stem cell (hiPSC)-
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::0e326e27fbf7fc65e085222dc6bf70aa
https://doi.org/10.1101/2020.05.26.081083
https://doi.org/10.1101/2020.05.26.081083