Zobrazeno 1 - 7
of 7
pro vyhledávání: '"Susan L. McEvoy"'
Publikováno v:
Evolutionary Applications, Vol 17, Iss 4, Pp n/a-n/a (2024)
Abstract DNA methylation is critical to the regulation of transposable elements and gene expression and can play an important role in the adaptation of stress response mechanisms in plants. Traditional methods of methylation quantification rely on bi
Externí odkaz:
https://doaj.org/article/e115d3a507584b58874f40f330af12c2
Welcome to the big leaves: Best practices for improving genome annotation in non‐model plant genomes
Autor:
Vidya S. Vuruputoor, Daniel Monyak, Karl C. Fetter, Cynthia Webster, Akriti Bhattarai, Bikash Shrestha, Sumaira Zaman, Jeremy Bennett, Susan L. McEvoy, Madison Caballero, Jill L. Wegrzyn
Publikováno v:
Applications in Plant Sciences, Vol 11, Iss 4, Pp n/a-n/a (2023)
Abstract Premise Robust standards to evaluate quality and completeness are lacking in eukaryotic structural genome annotation, as genome annotation software is developed using model organisms and typically lacks benchmarking to comprehensively evalua
Externí odkaz:
https://doaj.org/article/18d556ae2de6405eb5a6bc0dfc62b0e7
DNA methylation is critical to the regulation of transposable elements and gene expression, and can play an important role in the adaptation of stress response mechanisms in plants. Traditional methods of methylation quantification rely on bisulfite
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::55d5e03a25a272ee2a2487d28901acdb
https://doi.org/10.22541/au.168475038.81645681/v1
https://doi.org/10.22541/au.168475038.81645681/v1
Welcome to the big leaves: best practices for improving genome annotation in non-model plant genomes
Autor:
Vidya S Vuruputoor, Daniel Monyak, Karl C. Fetter, Cynthia Webster, Akriti Bhattarai, Bikash Shrestha, Sumaira Zaman, Jeremy Bennett, Susan L. McEvoy, Madison Caballero, Jill L. Wegrzyn
•Premise of the studyRobust standards to evaluate quality and completeness are lacking for eukaryotic structural genome annotation. Genome annotation software is developed with model organisms and does not typically include benchmarking to comprehe
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c5d9e501a0bf017153d8f6943c864481
https://doi.org/10.1101/2022.10.03.510643
https://doi.org/10.1101/2022.10.03.510643
Autor:
Susan L. McEvoy, U. Uzay Sezen, Alexander Trouern‐Trend, Sean M. McMahon, Paul G. Schaberg, Jie Yang, Jill L. Wegrzyn, Nathan G. Swenson
Publikováno v:
The Plant journal : for cell and molecular biology. 109(6)
Maples (the genus Acer) represent important and beloved forest, urban, and ornamental trees distributed throughout the Northern hemisphere. They exist in a diverse array of native ranges and distributions, across spectrums of tolerance or decline, an
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e65f2944206bd6b798e50a186fea5e21
https://pubmed.ncbi.nlm.nih.gov/34967059
https://pubmed.ncbi.nlm.nih.gov/34967059
Autor:
Paul G. Schaberg, Uzay U. Sezen, Alexander J. Trouern-Trend, Sean M. McMahon, Jill L. Wegrzyn, Jie Yang, Susan L. McEvoy, Nathan G. Swenson
Maples (the genus Acer) represent important and beloved forest, urban, and ornamental trees distributed throughout the Northern hemisphere. They exist in a diverse array of native ranges and distributions, across spectrums of tolerance or decline, an
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::cff7c930dc57cfb4386a3d16bc9127ce
https://doi.org/10.1101/2021.07.19.452996
https://doi.org/10.1101/2021.07.19.452996
Autor:
Madison Caballero, Jeremy Bennett, Laura Townsend, Carol A. Loopstra, Susan L. McEvoy, Ross W. Whetten, Edwin Lauer, Sumaira Zaman, Jill L. Wegrzyn, Mihir K. Mandal, Jason A. Holliday, Juan J. Acosta, Fikret Isik, Andrew J. Eckert, Colin Jackson
Publikováno v:
Applications in plant sciences, vol 9, iss 6
Applications in Plant Sciences, Vol 9, Iss 6, Pp n/a-n/a (2021)
Applications in Plant Sciences, Vol 9, Iss 6, Pp n/a-n/a (2021)
Premise An informatics approach was used for the construction of an Axiom genotyping array from heterogeneous, high-throughput sequence data to assess the complex genome of loblolly pine (Pinus taeda). Methods High-throughput sequence data, sourced f
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::efeecc6f8816d17baee853c54d989b7d
https://hdl.handle.net/10919/109664
https://hdl.handle.net/10919/109664