Zobrazeno 1 - 10
of 24
pro vyhledávání: '"Sujay Vennam"'
Autor:
Peipei Lu, Joseph Foley, Chunfang Zhu, Katherine McNamara, Korsuk Sirinukunwattana, Sujay Vennam, Sushama Varma, Hamid Fehri, Arunima Srivastava, Shirley Zhu, Jens Rittscher, Parag Mallick, Christina Curtis, Robert West
Publikováno v:
Breast Cancer Research, Vol 23, Iss 1, Pp 1-15 (2021)
Abstract Background The acquisition of oncogenic drivers is a critical feature of cancer progression. For some carcinomas, it is clear that certain genetic drivers occur early in neoplasia and others late. Why these drivers are selected and how these
Externí odkaz:
https://doaj.org/article/5a4a0026406d47478c68357b08b07dc8
Autor:
Belén Rivero-Gutiérrez, Diego Mallo, Almudena Espín-Pérez, Sujay Vennam, Chunfang Zhu, Sushama Varma, Greg Scott, Joseph Foley, E Shelley Hwang, Carlo Maley, Robert West
Publikováno v:
Cancer Research. 83:PD2-09
Background: Metastasis is the leading cause of cancer related deaths in breast cancer patients. Lymphovascular invasion represents one of the earliest stages of metastasis wherein the cells are introduced to a very different and distinct microenviron
Autor:
Monika A. Davare, Matt van de Rijn, Maria Debiec-Rychter, Sujay Vennam, Sushama Varma, Nicolle E. Hofmann, Janét Pittsenbarger, Joanna Przybyl, Kevin D. Nusser, Lara E. Davis
Supplementary Figure S1. ALK copy number data from TCGA-FX-A48G and TCGA-IW-A3M6 LMS visualized using IGV (Broad, MIT) Supplementary Table S1. Identification of ALK rearrangements using ChimeraScan algorithm. Supplementary Figure S2. Results from the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e8d3534528071df181b1e4004329b08d
https://doi.org/10.1158/1541-7786.22516138
https://doi.org/10.1158/1541-7786.22516138
Autor:
Matt van de Rijn, Maximilian Diehn, Ash A. Alizadeh, Maria Debiec-Rychter, Shirley Zhu, Sushama Varma, Erna Forgó, Aaron M. Newman, Sujay Vennam, Kristen N. Ganjoo, Lien Spans, Jacob J. Chabon, Joanna Przybyl
Purpose: The clinical utility of circulating tumor DNA (ctDNA) monitoring has been shown in tumors that harbor highly recurrent mutations. Leiomyosarcoma represents a type of tumor with a wide spectrum of heterogeneous genomic abnormalities; thus, ta
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::67f8376b44b5827852f5c6fe0732c2b2
https://doi.org/10.1158/1078-0432.c.6527472
https://doi.org/10.1158/1078-0432.c.6527472
Autor:
Matt van de Rijn, Maximilian Diehn, Ash A. Alizadeh, Maria Debiec-Rychter, Shirley Zhu, Sushama Varma, Erna Forgó, Aaron M. Newman, Sujay Vennam, Kristen N. Ganjoo, Lien Spans, Jacob J. Chabon, Joanna Przybyl
Figure S1 Summary of CAPP-Seq and GRP findings in plasma specimens of 7 LMS patients. Figure S2 Specificity and sensitivity of ctDNA detection by CAPP-Seq in LMS patients. Figure S3 Individual DNA copy number alteration profiles of 22 tumor specimens
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::35ecce424ae78760ef7f3dfa347c42f4
https://doi.org/10.1158/1078-0432.22470234
https://doi.org/10.1158/1078-0432.22470234
Autor:
Siri H Strand, Belén Rivero-Gutiérrez, Kathleen E Houlahan, Jose A Seoane, Lorraine M King, Tyler Risom, Lunden Simpson, Sujay Vennam, Aziz Khan, Timothy Hardman, Bryan E Harmon, Fergus J Couch, Kristalyn Gallagher, Mark Kilgore, Shi Wei, Angela DeMichele, Tari King, Priscilla F McAuliffe, Julie Nangia, Joanna Lee, Jennifer Tseng, Anna Maria Storniolo, Alastair Thompson, Gaorav Gupta, Robyn Burns, Deborah J Veis, Katherine DeSchryver, Chunfang Zhu, Magdalena Matusiak, Jason Wang, Shirley X Zhu, Jen Tappenden, Daisy Yi Ding, Dadong Zhang, Jingqin Luo, Shu Jiang, Sushama Varma, Cody Straub, Sucheta Srivastava, Christina Curtis, Rob Tibshirani, Robert Michael Angelo, Allison Hall, Kouros Owzar, Kornelia Polyak, Carlo Maley, Jeffrey R Marks, Graham A Colditz, E Shelley Hwang, Robert B West
Publikováno v:
Cancer Research. 82:GS4-07
Background. DCIS consists of a molecularly heterogeneous group of premalignant lesions, with variable risk of invasive progression. Understanding biomarkers for invasive progression could help individualize treatment recommendations based upon tumor
Autor:
Siri H. Strand, Belén Rivero-Gutiérrez, Kathleen E. Houlahan, Jose A. Seoane, Lorraine M. King, Tyler Risom, Lunden A. Simpson, Sujay Vennam, Aziz Khan, Luis Cisneros, Timothy Hardman, Bryan Harmon, Fergus Couch, Kristalyn Gallagher, Mark Kilgore, Shi Wei, Angela DeMichele, Tari King, Priscilla F. McAuliffe, Julie Nangia, Joanna Lee, Jennifer Tseng, Anna Maria Storniolo, Alastair M. Thompson, Gaorav P. Gupta, Robyn Burns, Deborah J. Veis, Katherine DeSchryver, Chunfang Zhu, Magdalena Matusiak, Jason Wang, Shirley X. Zhu, Jen Tappenden, Daisy Yi Ding, Dadong Zhang, Jingqin Luo, Shu Jiang, Sushama Varma, Lauren Anderson, Cody Straub, Sucheta Srivastava, Christina Curtis, Rob Tibshirani, Robert Michael Angelo, Allison Hall, Kouros Owzar, Kornelia Polyak, Carlo Maley, Jeffrey R. Marks, Graham A. Colditz, E. Shelley Hwang, Robert B. West
Publikováno v:
Scientia
Strand, S H, Rivero-Gutiérrez, B, Houlahan, K E, Seoane, J A, King, L M, Risom, T, Simpson, L A, Vennam, S, Khan, A, Cisneros, L, Hardman, T, Harmon, B, Couch, F, Gallagher, K, Kilgore, M, Wei, S, DeMichele, A, King, T, McAuliffe, P F, Nangia, J, Lee, J, Tseng, J, Storniolo, A M, Thompson, A M, Gupta, G P, Burns, R, Veis, D J, DeSchryver, K, Zhu, C, Matusiak, M, Wang, J, Zhu, S X, Tappenden, J, Ding, D Y, Zhang, D, Luo, J, Jiang, S, Varma, S, Anderson, L, Straub, C, Srivastava, S, Curtis, C, Tibshirani, R, Angelo, R M, Hall, A, Owzar, K, Polyak, K, Maley, C, Marks, J R, Colditz, G A, Hwang, E S & West, R B 2022, ' Molecular classification and biomarkers of clinical outcome in breast ductal carcinoma in situ : Analysis of TBCRC 038 and RAHBT cohorts ', Cancer Cell, vol. 40, no. 12, pp. 1521-1536.e7 . https://doi.org/10.1016/j.ccell.2022.10.021
Strand, S H, Rivero-Gutiérrez, B, Houlahan, K E, Seoane, J A, King, L M, Risom, T, Simpson, L A, Vennam, S, Khan, A, Cisneros, L, Hardman, T, Harmon, B, Couch, F, Gallagher, K, Kilgore, M, Wei, S, DeMichele, A, King, T, McAuliffe, P F, Nangia, J, Lee, J, Tseng, J, Storniolo, A M, Thompson, A M, Gupta, G P, Burns, R, Veis, D J, DeSchryver, K, Zhu, C, Matusiak, M, Wang, J, Zhu, S X, Tappenden, J, Ding, D Y, Zhang, D, Luo, J, Jiang, S, Varma, S, Anderson, L, Straub, C, Srivastava, S, Curtis, C, Tibshirani, R, Angelo, R M, Hall, A, Owzar, K, Polyak, K, Maley, C, Marks, J R, Colditz, G A, Hwang, E S & West, R B 2022, ' Molecular classification and biomarkers of clinical outcome in breast ductal carcinoma in situ : Analysis of TBCRC 038 and RAHBT cohorts ', Cancer Cell, vol. 40, no. 12, pp. 1521-1536.e7 . https://doi.org/10.1016/j.ccell.2022.10.021
Ductal carcinoma in situ; Tumor microenvironment; Whole genome sequencing Carcinoma ductal in situ; Microambiente tumoral; Secuenciación del genoma completo Carcinoma ductal in situ; Microambient tumoral; Seqüenciació del genoma complet Ductal car
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ab5ce28cf6c965de1e61deadc35a7264
https://hdl.handle.net/11351/8732
https://hdl.handle.net/11351/8732
Autor:
Joshua K. Tay, Chunfang Zhu, June Ho Shin, Shirley X. Zhu, Sushama Varma, Joseph W. Foley, Sujay Vennam, Yim Ling Yip, Chuan Keng Goh, De Yun Wang, Kwok Seng Loh, Sai Wah Tsao, Quynh-Thu Le, John B. Sunwoo, Robert B. West
Publikováno v:
Science Advances. 8
Nasopharyngeal cancer (NPC) is an Epstein-Barr virus (EBV)–positive epithelial malignancy with an extensive inflammatory infiltrate. Traditional RNA-sequencing techniques uncovered only microenvironment signatures, while the gene expression of the
Autor:
Sujay Vennam, Sushama Varma, Parag Mallick, Christina Curtis, Peipei Lu, Shirley Zhu, Chunfang Zhu, Joseph W. Foley, Jens Rittscher, Robert B. West, Katherine McNamara, Hamid Fehri, Arunima Srivastava, Korsuk Sirinukunwattana
Publikováno v:
Breast Cancer Research, Vol 23, Iss 1, Pp 1-15 (2021)
Breast Cancer Research : BCR
Breast Cancer Research : BCR
Background The acquisition of oncogenic drivers is a critical feature of cancer progression. For some carcinomas, it is clear that certain genetic drivers occur early in neoplasia and others late. Why these drivers are selected and how these changes
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::907b73785784bddd6d5db97ea245fd91
https://ora.ox.ac.uk/objects/uuid:b8582f56-7946-44a8-bfe7-00d76c5faf1d
https://ora.ox.ac.uk/objects/uuid:b8582f56-7946-44a8-bfe7-00d76c5faf1d
Autor:
Chun Fang Zhu, Yen Chen Kevin Ko, Christina S. Kong, Jonathan R. Pollack, Sushama Varma, Robert B. West, Sujay Vennam, Catherine F. Poh, Richard C.K. Jordan, Shirley Zhu
Publikováno v:
The American journal of surgical pathology, vol 44, iss 5
Am J Surg Pathol
Am J Surg Pathol
Odontogenic tumors show considerable morphologic heterogeneity and at times the diagnosis can be challenging. Ameloblastoma, the most common odontogenic tumor, can have morphological similarity to some salivary gland tumors and therefore we sought to