Zobrazeno 1 - 10
of 11
pro vyhledávání: '"Sudhir C. Sharma"'
Autor:
Jamie, Matteson, Cindy H, Wu, Deepika, Mathur, Hao, Tang, Stanley, Sciortino, Lisa, Feuchtbaum, Tracey, Bishop, Sudhir C, Sharma, Partha, Neogi, Ina, Fitzgibbon, Richard S, Olney
Publikováno v:
Journal of Neuromuscular Diseases. 9:777-785
Background: Universal spinal muscular atrophy (SMA) newborn screening was implemented in California on June 24, 2020. Objective: We describe California’s experience with the first 18 months of SMA newborn screening, including our assay methodology,
Publikováno v:
ACS Catalysis, vol 8, iss 1
Vaissier, V; Sharma, SC; Schaettle, K; Zhang, T; & Head-Gordon, T. (2018). Computational Optimization of Electric Fields for Improving Catalysis of a Designed Kemp Eliminase. ACS Catalysis, 8(1), 219-227. doi: 10.1021/acscatal.7b03151. UC Berkeley: Retrieved from: http://www.escholarship.org/uc/item/0224952p
Vaissier, V; Sharma, SC; Schaettle, K; Zhang, T; & Head-Gordon, T. (2018). Computational Optimization of Electric Fields for Improving Catalysis of a Designed Kemp Eliminase. ACS Catalysis, 8(1), 219-227. doi: 10.1021/acscatal.7b03151. UC Berkeley: Retrieved from: http://www.escholarship.org/uc/item/0224952p
© 2017 American Chemical Society. Here we report a computational method to improve efficiency of a de novo designed Kemp eliminase enzyme KE15, by identifying mutations that enhance electric fields and chemical positioning of the substrate that cont
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::15a0d463b4d0ef47f0c620130d389eb9
https://escholarship.org/uc/item/0224952p
https://escholarship.org/uc/item/0224952p
Autor:
Sudhir C. Sharma, Judith P. Klinman
Publikováno v:
Biochemistry
Biochemistry, vol 54, iss 35
Biochemistry, vol 54, iss 35
Soybean lipoxygenase-1 (SLO-1) is a paradigmatic enzyme system for studying the contribution of hydrogen tunneling to enzymatic proton-coupled electron transfer processes. In this study, the impact of pairs of double mutants on the properties of SLO-
Publikováno v:
Journal of the American Chemical Society. 139(16)
We report electric field values relevant to the reactant and transition states of designed Kemp eliminases KE07 and KE70 and their improved variants from laboratory directed evolution (LDE), using atomistic simulations with the AMOEBA polarizable for
Publikováno v:
Physical chemistry chemical physics : PCCP, vol 18, iss 28
Bhowmick, A; Sharma, SC; Honma, H; & Head-Gordon, T. (2016). The role of side chain entropy and mutual information for improving the: De novo design of Kemp eliminases KE07 and KE70. Physical Chemistry Chemical Physics, 18(28), 19386-19396. doi: 10.1039/c6cp03622h. UC Berkeley: Retrieved from: http://www.escholarship.org/uc/item/5646b2kj
Bhowmick, A; Sharma, SC; Honma, H; & Head-Gordon, T. (2016). The role of side chain entropy and mutual information for improving the: De novo design of Kemp eliminases KE07 and KE70. Physical Chemistry Chemical Physics, 18(28), 19386-19396. doi: 10.1039/c6cp03622h. UC Berkeley: Retrieved from: http://www.escholarship.org/uc/item/5646b2kj
This journal is © 2016 The Owner Societies. Side chain entropy and mutual entropy information between residue pairs have been calculated for two de novo designed Kemp eliminase enzymes, KE07 and KE70, and for their most improved versions at the end
Autor:
David E. Wemmer, Jeffrey G. Pelton, K. Aurelia Ball, Anna Chen, Sudhir C. Sharma, Teresa Head-Gordon, Tara Armand
Publikováno v:
Protein expression and purification. 116
Alzheimer's disease (AD) is a progressive neurodegenerative disease affecting millions of people worldwide. AD is characterized by the presence of extracellular plaques composed of aggregated/oligomerized β-amyloid peptides with Aβ42 peptide repres
Autor:
Sharon Hammes-Schiffer, Alexander D. Scouras, Cody A. Marcus Carr, Judith P. Klinman, Alexander V. Soudackov, Shenshen Hu, Sudhir C. Sharma, Tom Alber
Publikováno v:
Journal of the American Chemical Society, vol 136, iss 23
Journal of the American Chemical Society
Journal of the American Chemical Society
The enzyme soybean lipoxygenase (SLO) has served as a prototype for hydrogen-tunneling reactions, as a result of its unusual kinetic isotope effects (KIEs) and their temperature dependencies. Using a synergy of kinetic, structural, and theoretical st
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2d11c0c05b1ef42910d2b88da5d10392
https://escholarship.org/uc/item/3zt303b4
https://escholarship.org/uc/item/3zt303b4
Publikováno v:
ChemBioChem. 9:1587-1589
Here the focus is on the protein postsynaptic density 95 (PSD-95), which bears three PDZ domains. Abundant in neurons, PSD-95 serves as a nexus for transient interactions that affect core synaptic events, such as transmission and plasticity.[3, 4] In
Publikováno v:
Biopolymers
Biopolymers, Wiley, 2009, 92 (3), pp.183-193. ⟨10.1002/bip.21172⟩
Biopolymers, Wiley, 2009, 92 (3), pp.183-193. ⟨10.1002/bip.21172⟩
International audience; The use of bacteriophage T7 is presented as a peptide display platform to identify short binding sequences for PDZ domain proteins. Two different domains are examined, the 10th PDZ domain (PDZ10) of the multi-PDZ domain protei
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2c1ed5120b3ae1e17bdec5d47a7a6299
https://hal.archives-ouvertes.fr/hal-01668582
https://hal.archives-ouvertes.fr/hal-01668582
Publikováno v:
Biochemistry. 46(44)
PDZ10 is the 10th of 13 PDZ domains found within MUPP1, a cytoplasmic scaffolding protein first identified as an endogenous binding partner of serotonin receptor type 2c (5HT2c). This association, as with those of several other interacting proteins t