Zobrazeno 1 - 9
of 9
pro vyhledávání: '"Sudharshan Rangarajan"'
Autor:
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-16 (2023)
Abstract Generating reference maps of interactome networks illuminates genetic studies by providing a protein-centric approach to finding new components of existing pathways, complexes, and processes. We apply state-of-the-art methods to identify bin
Externí odkaz:
https://doaj.org/article/e41758225ff34dd59dda7af0132321d4
Autor:
Soon Gang Choi, Julien Olivet, Patricia Cassonnet, Pierre-Olivier Vidalain, Katja Luck, Luke Lambourne, Kerstin Spirohn, Irma Lemmens, Mélanie Dos Santos, Caroline Demeret, Louis Jones, Sudharshan Rangarajan, Wenting Bian, Eloi P. Coutant, Yves L. Janin, Sylvie van der Werf, Philipp Trepte, Erich E. Wanker, Javier De Las Rivas, Jan Tavernier, Jean-Claude Twizere, Tong Hao, David E. Hill, Marc Vidal, Michael A. Calderwood, Yves Jacob
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-13 (2019)
Comprehensive mapping of binary protein-protein interactions requires to combine several complementary assays. Here, the authors show that complete coverage could be reached with a minimal number of assays as long as they explore various experimental
Externí odkaz:
https://doaj.org/article/2f419fab78844c44ac0e5edf56d0f33d
Autor:
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Cote, Steffi De Rouck, Alice Desbuleux, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Generating reference maps of the interactome networks underlying most cellular functions can greatly illuminate genetic studies by providing a protein-centric approach to finding new components of existing pathways, complexes, and processes. Here, we
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::dfc07394b10bad778cce5d2967c24cbc
https://doi.org/10.1101/2022.08.02.502359
https://doi.org/10.1101/2022.08.02.502359
Autor:
Eyal Simonovsky, Joseph C. Mellor, Amélie Dricot, Marc Vidal, Liana Goehring, Miquel Duran-Frigola, Florian Goebels, Dayag Sheykhkarimli, Thomas Rolland, Murat Tasan, John Rasla, Steffi De Rouck, Carles Pons, Sadie Schlabach, Yoseph Kassa, Claudia Colabella, Dong-Sic Choi, Yves Jacob, Joseph N. Paulson, Javier De Las Rivas, Madeleine F. Hardy, Francisco J. Campos-Laborie, Xinping Yang, Soon Gang Choi, Frederick P. Roth, Kerstin Spirohn, Nishka Kishore, Luke Lambourne, Cassandra D’Amata, Dawit Balcha, Adriana San-Miguel, Anupama Yadav, Anjali Gopal, Suet-Feung Chin, Suzanne Gaudet, Yang Wang, István Kovács, Elodie Hatchi, Natascha van Lieshout, Michael A. Calderwood, Yu Xia, Gloria M. Sheynkman, Robert J. Weatheritt, Marinella Gebbia, Atina G. Cote, Bridget E. Begg, Mohamed Helmy, Katja Luck, Bridget Teeking, Quan Zhong, Serena Landini, David E. Hill, Sudharshan Rangarajan, Georges Coppin, Ghazal Haddad, Omer Basha, Carl Pollis, Dylan Markey, Alice Desbuleux, Hanane Ennajdaoui, Dae-Kyum Kim, Vincent Tropepe, Roujia Li, Steven Deimling, Jennifer J. Knapp, Jan Tavernier, Mariana Babor, Benoit Charloteaux, Gary D. Bader, Alexander O. Tejeda, Aaron Richardson, Ruth Brignall, Ashyad Rayhan, Irma Lemmens, Tong Hao, Christian Bowman-Colin, Janusz Rak, David De Ridder, Jochen Weile, Wenting Bian, Jean-Claude Twizere, Patrick Aloy, Esti Yeger-Lotem, Meaghan Daley, Tiziana M. Cafarelli, Andrew MacWilliams, Miles W. Mee, Yun Shen
Publikováno v:
Digital.CSIC. Repositorio Institucional del CSIC
instname
Nature
Nature, Nature Publishing Group, 2020, 580 (7803), pp.402-408. ⟨10.1038/s41586-020-2188-x⟩
Nature, 2020, 580 (7803), pp.402-408. ⟨10.1038/s41586-020-2188-x⟩
instname
Nature
Nature, Nature Publishing Group, 2020, 580 (7803), pp.402-408. ⟨10.1038/s41586-020-2188-x⟩
Nature, 2020, 580 (7803), pp.402-408. ⟨10.1038/s41586-020-2188-x⟩
et al.
Global insights into cellular organization and genome function require comprehensive understanding of the interactome networks that mediate genotype–phenotype relationships1,2. Here we present a human ‘all-by-all’ reference interact
Global insights into cellular organization and genome function require comprehensive understanding of the interactome networks that mediate genotype–phenotype relationships1,2. Here we present a human ‘all-by-all’ reference interact
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::faac39e9886775ddfef26fed76c6c35f
http://hdl.handle.net/10261/222715
http://hdl.handle.net/10261/222715
Autor:
Sudharshan Rangarajan, Philipp Trepte, Luke Lambourne, Soon Gang Choi, Patricia Cassonnet, Irma Lemmens, Javier De Las Rivas, Tong Hao, Wenting Bian, Marc Vidal, Eloi P. Coutant, Pierre-Olivier Vidalain, David E. Hill, Caroline Demeret, Mélanie Dos Santos, Michael A. Calderwood, Louis Jones, Julien Olivet, Kerstin Spirohn, Sylvie van der Werf, Erich E. Wanker, Jan Tavernier, Yves Jacob, Yves L. Janin, Jean-Claude Twizere, Katja Luck
Publikováno v:
Nature Communications
Nature Communications, Nature Publishing Group, 2019, 10 (1), pp.3907. ⟨10.1038/s41467-019-11809-2⟩
Digital.CSIC. Repositorio Institucional del CSIC
instname
Nature Communications, 2019, 10 (1), pp.3907. ⟨10.1038/s41467-019-11809-2⟩
Nature Communications, Vol 10, Iss 1, Pp 1-13 (2019)
Nature Communications, Nature Publishing Group, 2019, 10 (1), pp.3907. ⟨10.1038/s41467-019-11809-2⟩
Digital.CSIC. Repositorio Institucional del CSIC
instname
Nature Communications, 2019, 10 (1), pp.3907. ⟨10.1038/s41467-019-11809-2⟩
Nature Communications, Vol 10, Iss 1, Pp 1-13 (2019)
© The Author(s) 2019.
Complementary assays are required to comprehensively map complex biological entities such as genomes, proteomes and interactome networks. However, how various assays can be optimally combined to approach completeness while
Complementary assays are required to comprehensively map complex biological entities such as genomes, proteomes and interactome networks. However, how various assays can be optimally combined to approach completeness while
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e4f2bbfd1a267b0f3742fc7c507d912a
https://hal-pasteur.archives-ouvertes.fr/pasteur-02322138
https://hal-pasteur.archives-ouvertes.fr/pasteur-02322138
Autor:
Madeleine F. Hardy, Bridget Teeking, Francisco J. Campos-Laborie, Dayag Sheykhkarimli, Dawit Balcha, Anjali Gopal, Marinella Gebbia, Ashyad Rayhan, Carles Pons, Gloria M. Sheynkman, Yves Jacob, Suzanne Gaudet, Aaron Richardson, Yoseph Kassa, Elodie Hatchi, Kerstin Spirohn, Dong-Sic Choi, Yu Xia, Eyal Simonovsky, David E. Hill, Hanane Ennajdaoui, Steven Deimling, Joseph N. Paulson, Natascha van Lieshout, Vincent Tropepe, Michael A. Calderwood, István Kovács, Gary D. Bader, Luke Lambourne, Sudharshan Rangarajan, Tiziana M. Cafarelli, Carl Pollis, Suet-Feung Chin, Alice Desbuleux, Andrew MacWilliams, Amélie Dricot, Jean-Claude Twizere, Patrick Aloy, Atina G. Cote, Marc Vidal, Jan Tavernier, Javier De Las Rivas, Cassandra D’Amata, Alexander O. Tejeda, Esti Yeger-Lotem, Liana Goehring, Joseph C. Mellor, Meaghan Daley, Irma Lemmens, Soon Gang Choi, Christian Bowman-Colin, Ghazal Haddad, Janusz Rak, Florian Goebels, Robert J. Weatheritt, Mariana Babor, Yang Wang, Thomas Rolland, Steffi De Rouck, Jochen Weile, Serena Landini, John Rasla, Sadie Schlabach, Nishka Kishore, Bridget E. Begg, Ruth Brignall, Quan Zhong, Tong Hao, David De Ridder, Claudia Colabella, Frederick P. Roth, Anupama Yadav, Mohamed Helmy, Katja Luck, Omer Basha, Dae-Kyum Kim, Benoit Charloteaux, Georges Coppin, Dylan Markey, Roujia Li, Miquel Duran-Frigola, Adriana San-Miguel, Wenting Bian, Miles W. Mee, Jennifer J. Knapp, Yun Shen, Murat Tasan, Xinping Yang
Publikováno v:
Nature
Global insights into cellular organization and function require comprehensive understanding of interactome networks. Similar to how a reference genome sequence revolutionized human genetics, a reference map of the human interactome network is critica
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a0dcc8c7bb64a39a5f3d25ef82f4debb
https://doi.org/10.1101/605451
https://doi.org/10.1101/605451
Autor:
Jan Tavernier, Sylvie van der Werf, Mélanie Dos Santos, Eloi P. Coutant, Erich E. Wanker, Julien Olivet, Luke Lambourne, Philipp Trepte, Marc Vidal, Pierre-Olivier Vidalain, Michael A. Calderwood, Jean-Claude Twizere, Irma Lemmens, Louis Jones, Wenting Bian, Sudharshan Rangarajan, Katja Luck, Javier De Las Rivas, Patricia Cassonnet, Tong Hao, Yves L. Janin, Soon Gang Choi, Kerstin Spirohn, David E. Hill, Caroline Demeret, Yves Jacob
Complementary assays are required to comprehensively map complex biological entities such as genomes, proteomes and interactome networks. However, how various assays can be optimally combined to approach completeness while maintaining high precision
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::224e3384d67c8a8b98c5946d8680b149
Autor:
Haoyi Wang, Benjamin E. Powell, Meelad M. Dawlaty, Ana C. D’Alessio, Richard A. Young, Maya Mitalipova, Nathanael S. Gray, Dina A. Faddah, Thorold W. Theunissen, Dorothea Maetzel, Zi Peng Fan, Jessica Reddy, Kibibi Ganz, Qing Gao, Sumeth Imsoonthornruksa, Linyu Shi, Rudolf Jaenisch, Tenzin Lungjangwa, Yonatan Stelzer, Jianming Zhang, Sudharshan Rangarajan
Publikováno v:
Cell Stem Cell
Summary Embryonic stem cells (ESCs) of mice and humans have distinct molecular and biological characteristics, raising the question of whether an earlier, “naive” state of pluripotency may exist in humans. Here we took a systematic approach to id
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4ebd7a6d6a0a2f30a24153e6cd400e78
Autor:
Daniel B. Dadon, Albert W. Cheng, Thorold W. Theunissen, Rudolf Jaenisch, Chikdu S. Shivalila, Hui Yang, Linyu Shi, Sudharshan Rangarajan, Haoyi Wang, Yarden Katz
Publikováno v:
Cell Research
Technologies allowing for specific regulation of endogenous genes are valuable for the study of gene functions and have great potential in therapeutics. We created the CRISPR-on system, a two-component transcriptional activator consisting of a nuclea
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5999bb7c489198df781bc7c8c0dd0942
https://orcid.org/0000-0002-2905-0306
https://orcid.org/0000-0002-2905-0306