OSAT: a tool for sample-to-batch allocations in genomics experiments

Autor: Yan Li, Ma Changxing, Wang Dan, Hu Qiang, Qin Maochun, Conroy Jeffrey M, Sucheston Lara E, Ambrosone Christine B, Johnson Candace S, Wang Jianmin, Liu Song

Publikováno v: BMC Genomics, Vol 13, Iss 1, p 689 (2012)

Abstract Background Batch effect is one type of variability that is not of primary interest but ubiquitous in sizable genomic experiments. To minimize the impact of batch effects, an ideal experiment design should ensure the even distribution of biol

Externí odkaz: https://doaj.org/article/2f126ab660d04ffdb0f7a0aac59a0e61

Genetic Ancestry, Self-Reported Race and Ethnicity in African Americans and European Americans in the PCaP Cohort.

Autor: Sucheston, Lara E.¹ lara.sucheston@roswellpark.org, Bensen, Jeannette T.^2,3, Zongli Xu⁴, Singh, Prashant K.⁵, Preus, Leah¹, Mohler, James L.^3,6,7, Joseph Su, L.⁸, Fontham, Elizabeth T. H.⁹, Ruiz, Bernardo¹⁰, Smith, Gary J.^6,7, Taylor, Jack A.⁴

Publikováno v: PLoS ONE. Mar2012, Vol. 7 Issue 3, p1-7. 7p.

Pretreatment Serum Concentrations of 25-Hydroxyvitamin D and Breast Cancer Prognostic Characteristics: A Case-Control and a Case-Series Study.

Autor: Song Yao¹ song.yao@roswellpark.org, Sucheston, Lara E.¹, Millen, Amy E.², Johnson, Candace S.³, Trump, Donald L.⁴, Nesline, Mary K.¹, Davis, Warren¹, Chi-Chen Hong¹, McCann, Susan E.¹, Hwang, Helena⁵, Kulkarni, Swati⁶, Edge, Stephen B.⁶, O'Connor, Tracey L.⁴, Ambrosone, Christine B.¹

Publikováno v: PLoS ONE. 2011, Vol. 6 Issue 2, p1-8. 8p.

Assessment of variation in immunosuppressive pathway genes reveals TGFBR2 to be associated with prognosis of estrogen receptor-negative breast cancer after chemotherapy

Autor: Lei, Jieping, Rudolph, Anja, Moysich, Kirsten B, Rafiq, Sajjad, Behrens, Sabine, Goode, Ellen L, Pharoah, Paul P, Seibold, Petra, Fasching, Peter A, Andrulis, Irene L, Kristensen, Vessela N, Couch, Fergus J, Hamann, Ute, Hooning, Maartje J, Nevanlinna, Heli, Eilber, Ursula, Bolla, Manjeet K, Dennis, Joe, Wang, Qin, Lindblom, Annika, Mannermaa, Arto, Lambrechts, Diether, García-Closas, Montserrat, Hall, Per, Chenevix-Trench, Georgia, Shah, Mitul, Luben, Robert, Haeberle, Lothar, Ekici, Arif B, Beckmann, Matthias W, Knight, Julia A, Glendon, Gord, Tchatchou, Sandrine, Alnæs, Grethe I G, Borresen-Dale, Anne-Lise, Nord, Silje, Olson, Janet E, Hallberg, Emily, Vachon, Celine, Torres, Diana, Ulmer, Hans-Ulrich, Rüdiger, Thomas, Jager, Agnes, van Deurzen, Carolien H, Tilanus-Linthorst, Madeleine M, Muranen, Taru A, Aittomäki, Kristiina, Blomqvist, Carl, Margolin, Sara, Kosma, Veli-Matti, Hartikainen, Jaana M, Kataja, Vesa, Hatse, Sigrid, Wildiers, Hans, Smeets, Ann, Figueroa, Jonine, Chanock, Stephen J, Lissowska, Jolanta, Li, Jingmei, Humphreys, Keith, Phillips, Kelly-Anne, Linn, Sabine, Cornelissen, Sten, van den Broek, Sandra A J, Kang, Daehee, Choi, Ji-Yeob, Park, Sue K, Yoo, Keun-Young, Hsiung, Chia-Ni, Wu, Pei-Ei, Hou, Ming-Feng, Shen, Chen-Yang, Teo, Soo H, Taib, Nur A M, Yip, Cheng H, Ho, Gwo F, Matsuo, Keitaro, Ito, Hidemi, Iwata, Hiroji, Tajima, Kazuo, Dunning, Alison M, Benitez, Javier, Czene, Kamila, Sucheston, Lara E, Maishman, Tom, Tapper, William J, Eccles, Diana, Easton, Douglas F, Schmidt, Marjanka K, Chang-Claude, Jenny

Publikováno v: Breast Cancer Research. 2015 Feb 10;17(1):18

Externí odkaz: http://hdl.handle.net/10852/47297
https://www.duo.uio.no/bitstream/handle/10852/47297/1/13058_2015_Article_522.pdf

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