Comparative analyses of gene networks mediating cancer metastatic potentials across lineage types.

Autor: Wang S; Department of Biomedical Engineering, McCormick School of Engineering, Northwestern University, 2145 Sheridan Road, Evanston, IL 60628, United States., Stroup EK; Department of Pharmacology, Feinberg School of Medicine, Northwestern University, 303 E Superior Street, Chicago, IL 60611, United States., Wang TY; Department of Urology, Feinberg School of Medicine, Northwestern University, 303 E Superior Street, Chicago, IL 60611, United States., Yang R; Department of Urology, Feinberg School of Medicine, Northwestern University, 303 E Superior Street, Chicago, IL 60611, United States., Ji Z; Department of Biomedical Engineering, McCormick School of Engineering, Northwestern University, 2145 Sheridan Road, Evanston, IL 60628, United States.; Department of Pharmacology, Feinberg School of Medicine, Northwestern University, 303 E Superior Street, Chicago, IL 60611, United States.

Publikováno v: Briefings in bioinformatics [Brief Bioinform] 2024 May 23; Vol. 25 (4).

Deep learning of human polyadenylation sites at nucleotide resolution reveals molecular determinants of site usage and relevance in disease.

Autor: Stroup EK; Department of Pharmacology, Feinberg School of Medicine, Northwestern University, Chicago, IL, 60611, USA., Ji Z; Department of Pharmacology, Feinberg School of Medicine, Northwestern University, Chicago, IL, 60611, USA. zhe.ji@northwestern.edu.; Department of Biomedical Engineering, McCormick School of Engineering, Northwestern University, Evanston, IL, 60628, USA. zhe.ji@northwestern.edu.

Publikováno v: Nature communications [Nat Commun] 2023 Nov 15; Vol. 14 (1), pp. 7378. Date of Electronic Publication: 2023 Nov 15.

Derivation, Validation, and Clinical Relevance of a Pediatric Sepsis Phenotype With Persistent Hypoxemia, Encephalopathy, and Shock.

Autor: Sanchez-Pinto LN; Department of Pediatrics, Northwestern University Feinberg School of Medicine and Ann and Robert H. Lurie Children's Hospital of Chicago, Chicago, IL.; Department of Preventive Medicine, Northwestern University Feinberg School of Medicine, Chicago, IL., Bennett TD; Departments of Biomedical Informatics and Pediatrics, University of Colorado School of Medicine, Aurora, CO., Stroup EK; Department of Pharmacology, Northwestern University Feinberg School of Medicine, Chicago, IL., Luo Y; Department of Preventive Medicine, Northwestern University Feinberg School of Medicine, Chicago, IL., Atreya M; Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati Children's Hospital Medical Center, Cincinnati, OH., Bubeck Wardenburg J; Department of Pediatrics, Washington University School of Medicine, St. Louis, MO., Chong G; Department of Pediatrics, University of Chicago Pritzker School of Medicine, Chicago, IL., Geva A; Department of Anesthesiology, Critical Care, and Pain Medicine, Boston Children's Hospital, Boston, MA.; Computational Health Informatics Program, Boston Children's Hospital, Boston, MA.; Department of Anaesthesia, Harvard Medical School, Boston, MA., Faustino EVS; Department of Pediatrics, Yale School of Medicine, New Haven, CT., Farris RW; Department of Pediatrics, University of Washington and Seattle Children's Hospital, Seattle, WA., Hall MW; Department of Pediatrics, The Ohio State University and Nationwide Children's Hospital, Columbus, OH., Rogerson C; Department of Pediatrics, Indiana University School of Medicine, Riley Hospital for Children, Indianapolis, IN., Shah SS; Department of Pediatrics, Cohen Children's Medical Center, Donald and Barbara Zucker School of Medicine at Hofstra/Northwell, New Hyde Park, NY., Weiss SL; Department of Anesthesiology and Critical Care, Children's Hospital of Philadelphia, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA., Khemani RG; Department of Anesthesiology and Critical Care Medicine, Children's Hospital of Los Angeles, Los Angeles, CA.

Publikováno v: Pediatric critical care medicine : a journal of the Society of Critical Care Medicine and the World Federation of Pediatric Intensive and Critical Care Societies [Pediatr Crit Care Med] 2023 Oct 01; Vol. 24 (10), pp. 795-806. Date of Electronic Publication: 2023 Jun 05.

Corrigendum: Low-input RNase footprinting for simultaneous quantification of cytosolic and mitochondrial translation.

Autor: Li Q, Yang H, Stroup EK, Wang H, Ji Z

Publikováno v: Genome research [Genome Res] 2022 May; Vol. 32 (5), pp. 1015.

Derivation and Validation of Novel Phenotypes of Multiple Organ Dysfunction Syndrome in Critically Ill Children.

Autor: Sanchez-Pinto LN; Critical Care, Department of Pediatrics, Feinberg School of Medicine, Northwestern University, Chicago, Illinois.; Health and Biomedical Informatics, Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, Illinois.; Division of Critical Care Medicine, Ann and Robert H. Lurie Children's Hospital of Chicago, Chicago, Illinois., Stroup EK; Driskill Graduate Program, Feinberg School of Medicine, Northwestern University, Chicago, Illinois., Pendergrast T; Division of Critical Care Medicine, Ann and Robert H. Lurie Children's Hospital of Chicago, Chicago, Illinois., Pinto N; Section of Critical Care, Department of Pediatrics, The University of Chicago, Chicago, Illinois., Luo Y; Health and Biomedical Informatics, Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, Illinois.

Publikováno v: JAMA network open [JAMA Netw Open] 2020 Aug 03; Vol. 3 (8), pp. e209271. Date of Electronic Publication: 2020 Aug 03.