Zobrazeno 1 - 10
of 29
pro vyhledávání: '"Strattan JS"'
Autor:
Bin Li, Hongbo Yang, Jennifer A. Akiyama, Brandon J. Mannion, Afzal, David U. Gorkin, Diane Trout, Anne N. Harrington, Andre Wildberg, Sora Chee, Diane E. Dickel, Brian A. Williams, Henry Amrhein, Zhao Y, Bo Zhang, Bo Ding, Jean M. Davidson, Tyler H. Garvin, Elizabeth Lee, Yi Zhang, Ingrid Plajzer-Frick, Yin Shen, James Cherry, Momoe Kato, Len A. Pennacchio, Catherine S. Pickle, Yupeng He, Ecker, Yoko Fukuda-Yuzawa, Iros Barozzi, Strattan Js, Ah Young Lee, Quan T. Pham, Wei Wang, Axel Visel, Bing Ren, Yunjiang Qiu, Sebastian Preissl, Mengchi Wang
SUMMARYEmbryogenesis requires epigenetic information that allows each cell to respond appropriately to developmental cues. Histone modifications are core components of a cell’s epigenome, giving rise to chromatin states that modulate genome functio
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::606f0e93384ca02f26782160475b3729
https://doi.org/10.1101/166652
https://doi.org/10.1101/166652
Akademický článek
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Akademický článek
Tento výsledek nelze pro nepřihlášené uživatele zobrazit.
K zobrazení výsledku je třeba se přihlásit.
K zobrazení výsledku je třeba se přihlásit.
Kniha
Tento výsledek nelze pro nepřihlášené uživatele zobrazit.
K zobrazení výsledku je třeba se přihlásit.
K zobrazení výsledku je třeba se přihlásit.
Akademický článek
Tento výsledek nelze pro nepřihlášené uživatele zobrazit.
K zobrazení výsledku je třeba se přihlásit.
K zobrazení výsledku je třeba se přihlásit.
Akademický článek
Tento výsledek nelze pro nepřihlášené uživatele zobrazit.
K zobrazení výsledku je třeba se přihlásit.
K zobrazení výsledku je třeba se přihlásit.
Autor:
Hitz BC; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Lee JW; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Jolanki O; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Kagda MS; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Graham K; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Sud P; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Gabdank I; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Strattan JS; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Sloan CA; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Dreszer T; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Rowe LD; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Podduturi NR; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Malladi VS; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Chan ET; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Davidson JM; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Ho M; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Miyasato S; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Simison M; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Tanaka F; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Luo Y; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Whaling I; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Hong EL; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA., Lee BT; Genomics Institute, School of Engineering, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Sandstrom R; Altius Institute for Biomedical Sciences, 2211 Elliott Avenue, 6th Floor, Seattle, WA 98121, USA., Rynes E; Altius Institute for Biomedical Sciences, 2211 Elliott Avenue, 6th Floor, Seattle, WA 98121, USA., Nelson J; Altius Institute for Biomedical Sciences, 2211 Elliott Avenue, 6th Floor, Seattle, WA 98121, USA., Nishida A; Altius Institute for Biomedical Sciences, 2211 Elliott Avenue, 6th Floor, Seattle, WA 98121, USA., Ingersoll A; Altius Institute for Biomedical Sciences, 2211 Elliott Avenue, 6th Floor, Seattle, WA 98121, USA., Buckley M; Altius Institute for Biomedical Sciences, 2211 Elliott Avenue, 6th Floor, Seattle, WA 98121, USA., Frerker M; Altius Institute for Biomedical Sciences, 2211 Elliott Avenue, 6th Floor, Seattle, WA 98121, USA., Kim DS; Department of Genetics, Department of Computer Science, Stanford University, 240 Pasteur Drive, Palo Alto, CA 94304, USA., Boley N; Department of Genetics, Department of Computer Science, Stanford University, 240 Pasteur Drive, Palo Alto, CA 94304, USA., Trout D; Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125 USA., Dobin A; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA., Rahmanian S; Center for Complex Biological Systems, University of California, Irvine, Irvine, CA 92697, USA., Wyman D; Center for Complex Biological Systems, University of California, Irvine, Irvine, CA 92697, USA., Balderrama-Gutierrez G; Center for Complex Biological Systems, University of California, Irvine, Irvine, CA 92697, USA., Reese F; Center for Complex Biological Systems, University of California, Irvine, Irvine, CA 92697, USA., Durand NC; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.; Center for Theoretical Biological Physics, Rice University, Houston, TX 77030, USA.; Department of Computer Science, Rice University, Houston, TX 77030, USA., Dudchenko O; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Weisz D; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Rao SSP; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.; Department of Structural Biology, Stanford University School of Medicine, Stanford, CA 94305, USA.; Department of Medicine, University of California San Francisco, San Francisco, CA 94143, USA., Blackburn A; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.; Center for Theoretical Biological Physics, Rice University, Houston, TX 77030, USA., Gkountaroulis D; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.; Center for Theoretical Biological Physics, Rice University, Houston, TX 77030, USA., Sadr M; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Olshansky M; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA., Eliaz Y; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Nguyen D; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Bochkov I; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA., Shamim MS; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.; Center for Theoretical Biological Physics, Rice University, Houston, TX 77030, USA.; Department of Bioengineering, Rice University, Houston, TX 77030, USA.; Medical Scientist Training Program, Baylor College of Medicine, Houston, TX 77030, USA., Mahajan R; Center for Theoretical Biological Physics, Rice University, Houston, TX 77030, USA.; Department of BioSciences, Rice University, Houston, TX 77005, USA., Aiden E; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.; Center for Theoretical Biological Physics, Rice University, Houston, TX 77030, USA., Gingeras T; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA., Heath S; CNAG-CRG, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Barcelona, Spain. Universitat Pompeu Fabra, Barcelona, Spain., Hirst M; Micheal Smith Laboratories, University of British Columbia, British Columbia, Canada., Kent WJ; Genomics Institute, School of Engineering, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Kundaje A; Department of Genetics, Department of Computer Science, Stanford University, 240 Pasteur Drive, Palo Alto, CA 94304, USA., Mortazavi A; Center for Complex Biological Systems, University of California, Irvine, Irvine, CA 92697, USA., Wold B; Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125 USA., Cherry JM; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA.
Publikováno v:
Research square [Res Sq] 2023 Jul 19. Date of Electronic Publication: 2023 Jul 19.
The ENCODE4 long-read RNA-seq collection reveals distinct classes of transcript structure diversity.
Autor:
Reese F; Developmental and Cell Biology, University of California, Irvine, Irvine, USA.; Center for Complex Biological Systems, University of California, Irvine, Irvine, USA., Williams B; Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, USA., Balderrama-Gutierrez G; Developmental and Cell Biology, University of California, Irvine, Irvine, USA.; Center for Complex Biological Systems, University of California, Irvine, Irvine, USA., Wyman D; Center for Complex Biological Systems, University of California, Irvine, Irvine, USA., Çelik MH; Center for Complex Biological Systems, University of California, Irvine, Irvine, USA., Rebboah E; Center for Complex Biological Systems, University of California, Irvine, Irvine, USA., Rezaie N; Center for Complex Biological Systems, University of California, Irvine, Irvine, USA., Trout D; Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, USA., Razavi-Mohseni M; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, USA.; McKusick-Nathans Department of Genetic Medicine, Johns Hopkins University, Baltimore, USA., Jiang Y; Program in Computational Biology and Bioinformatics, Yale University, New Haven, USA.; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, USA., Borsari B; Program in Computational Biology and Bioinformatics, Yale University, New Haven, USA.; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, USA.; Centre for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain., Morabito S; Center for Complex Biological Systems, University of California, Irvine, Irvine, USA., Liang HY; Center for Complex Biological Systems, University of California, Irvine, Irvine, USA., McGill CJ; Developmental and Cell Biology, University of California, Irvine, Irvine, USA.; Center for Complex Biological Systems, University of California, Irvine, Irvine, USA., Rahmanian S; Center for Complex Biological Systems, University of California, Irvine, Irvine, USA., Sakr J; Center for Complex Biological Systems, University of California, Irvine, Irvine, USA.; Department of Pharmaceutical Sciences, University of California, Irvine, Irvine, USA., Jiang S; Developmental and Cell Biology, University of California, Irvine, Irvine, USA.; Center for Complex Biological Systems, University of California, Irvine, Irvine, USA., Zeng W; Developmental and Cell Biology, University of California, Irvine, Irvine, USA.; Center for Complex Biological Systems, University of California, Irvine, Irvine, USA., Carvalho K; Center for Complex Biological Systems, University of California, Irvine, Irvine, USA., Weimer AK; Department of Genetics, Stanford University School of Medicine, Palo Alto, USA., Dionne LA; The Jackson Laboratory, The Jackson Laboratory, Bar Harbor, USA., McShane A; Cellular and Molecular Biology Program, University of Michigan, Ann Arbor, USA.; Department of Radiation Oncology, University of Michigan, Ann Arbor, USA., Bedi K; Department of Biostatistics, University of Michigan, Ann Arbor, USA.; Center for RNA Biomedicine and Rogel Cancer Center, University of Michigan, Ann Arbor, USA., Elhajjajy SI; Program in Bioinformatics and Integrative Biology, University of Massachusetts Chan Medical School, Worcester, USA., Upchurch S; Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, USA., Jou J; Department of Genetics, Stanford University School of Medicine, Palo Alto, USA., Youngworth I; Department of Genetics, Stanford University School of Medicine, Palo Alto, USA., Gabdank I; Department of Genetics, Stanford University School of Medicine, Palo Alto, USA., Sud P; Department of Genetics, Stanford University School of Medicine, Palo Alto, USA., Jolanki O; Department of Genetics, Stanford University School of Medicine, Palo Alto, USA., Strattan JS; Department of Genetics, Stanford University School of Medicine, Palo Alto, USA., Kagda MS; Department of Genetics, Stanford University School of Medicine, Palo Alto, USA., Snyder MP; Department of Genetics, Stanford University School of Medicine, Palo Alto, USA., Hitz BC; Department of Genetics, Stanford University School of Medicine, Palo Alto, USA., Moore JE; Program in Bioinformatics and Integrative Biology, University of Massachusetts Chan Medical School, Worcester, USA., Weng Z; Program in Bioinformatics and Integrative Biology, University of Massachusetts Chan Medical School, Worcester, USA., Bennett D; Rush Alzheimer's Disease Center, Rush University Medical Center, Chicago, USA.; Department of Neurological Sciences, Rush University Medical Center, Chicago, USA., Reinholdt L; The Jackson Laboratory, The Jackson Laboratory, Bar Harbor, USA., Ljungman M; Center for RNA Biomedicine and Rogel Cancer Center, University of Michigan, Ann Arbor, USA.; Departments of Radiation Oncology and Environmental Health Sciences, University of Michigan, Ann Arbor, USA., Beer MA; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, USA.; McKusick-Nathans Department of Genetic Medicine, Johns Hopkins University, Baltimore, USA., Gerstein MB; Program in Computational Biology and Bioinformatics, Yale University, New Haven, USA.; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, USA.; Section on Biomedical Informatics and Data Science, Yale University, New Haven, USA.; Department of Statistics and Data Science, Yale University, New Haven, USA.; Department of Computer Science, Yale University, New Haven, USA., Pachter L; Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, USA.; Department of Computing and Mathematical Sciences, California Institute of Technology, Pasadena, USA., Guigó R; Centre for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain.; Department of Medicine and Life Sciences, Universitat Pompeu Fabra, Barcelona, Spain., Wold BJ; Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, USA., Mortazavi A; Developmental and Cell Biology, University of California, Irvine, Irvine, USA.; Center for Complex Biological Systems, University of California, Irvine, Irvine, USA.
Publikováno v:
BioRxiv : the preprint server for biology [bioRxiv] 2023 May 16. Date of Electronic Publication: 2023 May 16.
Autor:
Schreiber J; Stanford University School of Medicine, Stanford, CA, USA. jmschreiber91@gmail.com., Boix C; Stanford University School of Medicine, Stanford, CA, USA., Wook Lee J; Stanford University School of Medicine, Stanford, CA, USA., Li H; Stanford University School of Medicine, Stanford, CA, USA., Guan Y; Stanford University School of Medicine, Stanford, CA, USA., Chang CC; Stanford University School of Medicine, Stanford, CA, USA., Chang JC; Stanford University School of Medicine, Stanford, CA, USA., Hawkins-Hooker A; Stanford University School of Medicine, Stanford, CA, USA., Schölkopf B; Stanford University School of Medicine, Stanford, CA, USA., Schweikert G; Stanford University School of Medicine, Stanford, CA, USA., Carulla MR; Stanford University School of Medicine, Stanford, CA, USA., Canakoglu A; Stanford University School of Medicine, Stanford, CA, USA., Guzzo F; Stanford University School of Medicine, Stanford, CA, USA., Nanni L; Stanford University School of Medicine, Stanford, CA, USA., Masseroli M; Stanford University School of Medicine, Stanford, CA, USA., Carman MJ; Stanford University School of Medicine, Stanford, CA, USA., Pinoli P; Stanford University School of Medicine, Stanford, CA, USA., Hong C; Stanford University School of Medicine, Stanford, CA, USA., Yip KY; Stanford University School of Medicine, Stanford, CA, USA., Spence JP; Stanford University School of Medicine, Stanford, CA, USA., Batra SS; Stanford University School of Medicine, Stanford, CA, USA., Song YS; Stanford University School of Medicine, Stanford, CA, USA., Mahony S; Stanford University School of Medicine, Stanford, CA, USA., Zhang Z; Stanford University School of Medicine, Stanford, CA, USA., Tan W; Stanford University School of Medicine, Stanford, CA, USA., Shen Y; Stanford University School of Medicine, Stanford, CA, USA., Sun Y; Stanford University School of Medicine, Stanford, CA, USA., Shi M; Stanford University School of Medicine, Stanford, CA, USA., Adrian J; Stanford University School of Medicine, Stanford, CA, USA., Sandstrom R; Stanford University School of Medicine, Stanford, CA, USA., Farrell N; Stanford University School of Medicine, Stanford, CA, USA., Halow J; Stanford University School of Medicine, Stanford, CA, USA., Lee K; Stanford University School of Medicine, Stanford, CA, USA., Jiang L; Stanford University School of Medicine, Stanford, CA, USA., Yang X; Stanford University School of Medicine, Stanford, CA, USA., Epstein C; Stanford University School of Medicine, Stanford, CA, USA., Strattan JS; Stanford University School of Medicine, Stanford, CA, USA., Bernstein B; Stanford University School of Medicine, Stanford, CA, USA., Snyder M; Stanford University School of Medicine, Stanford, CA, USA., Kellis M; Stanford University School of Medicine, Stanford, CA, USA., Stafford W; Stanford University School of Medicine, Stanford, CA, USA., Kundaje A; Stanford University School of Medicine, Stanford, CA, USA.
Publikováno v:
Genome biology [Genome Biol] 2023 Apr 18; Vol. 24 (1), pp. 79. Date of Electronic Publication: 2023 Apr 18.
Autor:
Rozowsky J; Section on Biomedical Informatics and Data Science, Yale University, New Haven, CT, USA; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Gao J; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Borsari B; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA; Centre for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Catalonia, Spain., Yang YT; Institute of Science and Technology for Brain-Inspired Intelligence; MOE Key Laboratory of Computational Neuroscience and Brain-Inspired Intelligence; MOE Frontiers Center for Brain Science, Fudan University, Shanghai 200433, China; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Galeev T; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Gürsoy G; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Epstein CB; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Xiong K; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Xu J; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Li T; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Liu J; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Yu K; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA., Berthel A; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Chen Z; Department of Statistics and Data Science, Yale University, New Haven, CT, USA., Navarro F; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Sun MS; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Wright J; Institute of Cancer Research, London, UK., Chang J; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Cameron CJF; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Shoresh N; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Gaskell E; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Drenkow J; Functional Genomics, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA., Adrian J; Department of Genetics, School of Medicine, Stanford University, Palo Alto, CA, USA., Aganezov S; Departments of Computer Science and Biology, Johns Hopkins University, Baltimore, MD, USA., Aguet F; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Balderrama-Gutierrez G; Department of Developmental and Cell Biology, University of California, Irvine, Irvine, CA, USA., Banskota S; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Corona GB; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Chee S; Ludwig Institute for Cancer Research, University of California, San Diego, La Jolla, CA, USA., Chhetri SB; HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA., Cortez Martins GC; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Danyko C; Functional Genomics, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA., Davis CA; Functional Genomics, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA., Farid D; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Farrell NP; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Gabdank I; Department of Genetics, School of Medicine, Stanford University, Palo Alto, CA, USA., Gofin Y; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA., Gorkin DU; Ludwig Institute for Cancer Research, University of California, San Diego, La Jolla, CA, USA., Gu M; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Hecht V; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Hitz BC; Department of Genetics, School of Medicine, Stanford University, Palo Alto, CA, USA., Issner R; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Jiang Y; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Kirsche M; Departments of Computer Science and Biology, Johns Hopkins University, Baltimore, MD, USA., Kong X; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Lam BR; Department of Genetics, School of Medicine, Stanford University, Palo Alto, CA, USA., Li S; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Li B; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Li X; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA., Lin KZ; Department of Genetics, School of Medicine, Stanford University, Palo Alto, CA, USA., Luo R; Department of Computer Science, The University of Hong Kong, Hong Kong, CHN., Mackiewicz M; HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA., Meng R; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Moore JE; Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA, USA., Mudge J; European Bioinformatics Institute, Cambridge, Cambridgeshire, GB., Nelson N; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Nusbaum C; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Popov I; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Pratt HE; Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA, USA., Qiu Y; Ludwig Institute for Cancer Research, University of California, San Diego, La Jolla, CA, USA., Ramakrishnan S; Departments of Computer Science and Biology, Johns Hopkins University, Baltimore, MD, USA., Raymond J; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Salichos L; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA; Department of Biological and Chemical Sciences, New York Institute of Technology, Old Westbury, NY, USA., Scavelli A; Functional Genomics, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA., Schreiber JM; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Sedlazeck FJ; Departments of Computer Science and Biology, Johns Hopkins University, Baltimore, MD, USA; Simons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA; Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA., See LH; Functional Genomics, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA., Sherman RM; Departments of Computer Science and Biology, Johns Hopkins University, Baltimore, MD, USA., Shi X; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Shi M; Department of Genetics, School of Medicine, Stanford University, Palo Alto, CA, USA., Sloan CA; Department of Genetics, School of Medicine, Stanford University, Palo Alto, CA, USA., Strattan JS; Department of Genetics, School of Medicine, Stanford University, Palo Alto, CA, USA., Tan Z; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Tanaka FY; Department of Genetics, School of Medicine, Stanford University, Palo Alto, CA, USA., Vlasova A; Centre for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Catalonia, Spain; Comparative Genomics Group, Life Science Programme, Barcelona Supercomputing Centre, Barcelona, Spain; Institute of Research in Biomedicine, Barcelona, Spain., Wang J; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Werner J; Functional Genomics, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA., Williams B; Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA., Xu M; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Yan C; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA., Yu L; Institute of Cancer Research, London, UK., Zaleski C; Functional Genomics, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA., Zhang J; Department of Computer Science, University of California, Irvine, Irvine, CA, USA., Ardlie K; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Cherry JM; Department of Genetics, School of Medicine, Stanford University, Palo Alto, CA, USA., Mendenhall EM; HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA., Noble WS; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Weng Z; Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA, USA., Levine ME; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Pathology, Yale University School of Medicine, New Haven, CT, USA., Dobin A; Functional Genomics, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA., Wold B; Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA., Mortazavi A; Department of Developmental and Cell Biology, University of California, Irvine, Irvine, CA, USA., Ren B; Ludwig Institute for Cancer Research, University of California, San Diego, La Jolla, CA, USA., Gillis J; Functional Genomics, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA; Department of Physiology, University of Toronto, Toronto, ON, Canada., Myers RM; HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA., Snyder MP; Department of Genetics, School of Medicine, Stanford University, Palo Alto, CA, USA., Choudhary J; Institute of Cancer Research, London, UK., Milosavljevic A; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA., Schatz MC; Departments of Computer Science and Biology, Johns Hopkins University, Baltimore, MD, USA; Simons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA. Electronic address: mschatz@cs.jhu.edu., Bernstein BE; Broad Institute of MIT and Harvard, Cambridge, MA, USA; Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA. Electronic address: Bradley_Bernstein@dfci.harvard.edu., Guigó R; Centre for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Catalonia, Spain; Universitat Pompeu Fabra, Barcelona, Catalonia, Spain. Electronic address: roderic.guigo@crg.eu., Gingeras TR; Functional Genomics, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA. Electronic address: gingeras@cshl.edu., Gerstein M; Section on Biomedical Informatics and Data Science, Yale University, New Haven, CT, USA; Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA; Department of Statistics and Data Science, Yale University, New Haven, CT, USA; Department of Computer Science, Yale University, New Haven, CT, USA. Electronic address: mark@gersteinlab.org.
Publikováno v:
Cell [Cell] 2023 Mar 30; Vol. 186 (7), pp. 1493-1511.e40.