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Local improvement algorithms for a path packing problem: A performance analysis based on linear programming

Autor: De Bontridder, K.M.J., Halldórsson, B.V., Halldórsson, M.M., Hurkens, C.A.J., Lenstra, J.K., Ravi, R., Stougie, L.

Publikováno v: In Operations Research Letters January 2021 49(1):62-68

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Weighted haplotype assembly for future-generation sequencing reads

Autor: Patterson, M.D., Marschall, T., Pisanti, N., van Iersel, L.J.J., Stougie, L., Klau, G.W., Schönhuth, A.

Publikováno v: Journal of Computational Biology, 22(6), 498-509. Mary Ann Liebert Inc.
Patterson, M D, Marschall, T, Pisanti, N, van Iersel, L J J, Stougie, L, Klau, G W & Schönhuth, A 2015, ' Weighted haplotype assembly for future-generation sequencing reads ', Journal of Computational Biology, vol. 22, no. 6, pp. 498-509 . https://doi.org/10.1089/cmb.2014.0157

The human genome is diploid, which requires assigning heterozygous single nucleotide polymorphisms (SNPs) to the two copies of the genome. The resulting haplotypes, lists of SNPs belonging to each copy, are crucial for downstream analyses in populati

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::f545a5d7979a379b10c43a83c9a5e32b
https://hdl.handle.net/1871.1/35a47b66-0d62-4cda-8b50-5d10b03f1538

Minimizing average flow time in sensor data gathering

Autor: Bonifaci, V., Korteweg, P., Marchetti Spaccamela, A., Stougie, L., Fekete, S.P.

Publikováno v: Algorithmic Aspects of Wireless Sensor Networks (4th International Workshop, Algosensors 2008, Reykjavik, Iceland, July 12, 2008, Revised Selected Papers), 18-29
STARTPAGE=18;ENDPAGE=29;TITLE=Algorithmic Aspects of Wireless Sensor Networks (4th International Workshop, Algosensors 2008, Reykjavik, Iceland, July 12, 2008, Revised Selected Papers)
Bonifaci, V, Korteweg, P, Marchetti Spaccamela, A & Stougie, L 2008, Minimizing average flow time in sensor data gathering . in Proceedings of the 4th International Workshop on Algorithms for Sensor Networks (Algosensor) Bioinformatics, Lecture Notes in Computer Science . Springer Verlag, Berlin, pp. 18-29, 4th International Conference on Algorithms for Sensor Networks, 1/07/08 .
Proceedings of the 4th International Workshop on Algorithms for Sensor Networks (Algosensor) Bioinformatics, Lecture Notes in Computer Science, 18-29
STARTPAGE=18;ENDPAGE=29;TITLE=Proceedings of the 4th International Workshop on Algorithms for Sensor Networks (Algosensor) Bioinformatics, Lecture Notes in Computer Science
Algorithmic Aspects of Wireless Sensor Networks ISBN: 9783540928614
ALGOSENSORS

Building on previous work [Bonifaci et al., Minimizing flow time in the wireless gathering problem, STACS 2008] we study data gathering in a wireless network through multi-hop communication with the objective to minimize the average flow time of a da

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d3df11855d0a36818b290625b5341275
https://doi.org/10.1007/978-3-540-92862-1_3