Zobrazeno 1 - 10
of 595
pro vyhledávání: '"Steven Oberste"'
Autor:
Grace Nabakooza, Darlene D. Wagner, Nehalraza Momin, Rachel L. Marine, William C. Weldon, M. Steven Oberste
Publikováno v:
BMC Research Notes, Vol 17, Iss 1, Pp 1-7 (2024)
Abstract Trimming adapters and low-quality bases from next-generation sequencing (NGS) data is crucial for optimal analysis. We evaluated six trimming programs, implementing five different algorithms, for their effectiveness in trimming adapters and
Externí odkaz:
https://doaj.org/article/490f0efb5ef649ff89982ef46b6767a3
Autor:
Kun Zhao, Katie Farrell, Melchizedek Mashiku, Dawit Abay, Kevin Tang, M. Steven Oberste, Cara C. Burns
Publikováno v:
Frontiers in Public Health, Vol 11 (2023)
BackgroundThe National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) has amassed a vast reservoir of genetic data since its inception in 2007. These public data hold immense potential for supporting pathogen surveillance and
Externí odkaz:
https://doaj.org/article/7c2a7e23ff25410e93c9b04f3a6b04d9
Autor:
Li Wang, Markus H. Kainulainen, Nannan Jiang, Han Di, Gaston Bonenfant, Lisa Mills, Michael Currier, Punya Shrivastava-Ranjan, Brenda M. Calderon, Mili Sheth, Brian R. Mann, Jaber Hossain, Xudong Lin, Sandra Lester, Elizabeth A. Pusch, Joyce Jones, Dan Cui, Payel Chatterjee, M. Harley Jenks, Esther K. Morantz, Gloria P. Larson, Masato Hatta, Jennifer L. Harcourt, Azaibi Tamin, Yan Li, Ying Tao, Kun Zhao, Kristine Lacek, Ashley Burroughs, Wei Wang, Malania Wilson, Terianne Wong, So Hee Park, Suxiang Tong, John R. Barnes, Mark W. Tenforde, Wesley H. Self, Nathan I. Shapiro, Matthew C. Exline, D. Clark Files, Kevin W. Gibbs, David N. Hager, Manish Patel, Alison L. Halpin, Laura K. McMullan, Justin S. Lee, Hongjie Xia, Xuping Xie, Pei-Yong Shi, C. Todd Davis, Christina F. Spiropoulou, Natalie J. Thornburg, M. Steven Oberste, Vivien G. Dugan, SSEV Bioinformatics Working Group, David E. Wentworth, Bin Zhou
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-10 (2022)
Emerging SARS-CoV-2 variants raise concerns on immune evasion. Here, the authors evaluate the neutralization efficiency of COVID-19 mRNA vaccinee sera against representative viruses of 13 WHO-designated SARS-CoV-2 variants of concern/interest.
Externí odkaz:
https://doaj.org/article/84e63a00491642b6b45810225eb5bbbf
Autor:
Rahnuma Wahid, Laina Mercer, Chris Gast, Tirza De Leon, Xavier Sáez-Llorens, Alan Fix, Andrew Macadam, Laura Stephens, Konstantin Chumakov, Saskia L. Smits, Marta Murreddu, Jennifer L. Konopka-Anstadt, M. Steven Oberste, Cara C. Burns, Raul Andino, Novilia Sjafri Bachtiar, Erman Tritama, Ananda S. Bandyopadhyay, Gabriela Aguirre, Ricardo Rüttimann, John O. Konz
Publikováno v:
npj Vaccines, Vol 7, Iss 1, Pp 1-11 (2022)
Abstract Novel oral poliovirus vaccine type 2 (nOPV2) is being developed to reduce the rare occurrence of disease and outbreaks associated with the genetic instability of the Sabin vaccine strains. Children aged 1 to 5 years were enrolled in two rela
Externí odkaz:
https://doaj.org/article/a5bc437be7da4f459a47f98cae18af83
Autor:
Rahnuma Wahid, Laina Mercer, Andrew Macadam, Sarah Carlyle, Laura Stephens, Javier Martin, Konstantin Chumakov, Majid Laassri, Svetlana Petrovskaya, Saskia L. Smits, Koert J. Stittelaar, Chris Gast, William C. Weldon, Jennifer L. Konopka-Anstadt, M. Steven Oberste, Pierre Van Damme, Ilse De Coster, Ricardo Rüttimann, Ananda Bandyopadhyay, John Konz
Publikováno v:
npj Vaccines, Vol 6, Iss 1, Pp 1-11 (2021)
Abstract Sabin-strain oral polio vaccines (OPV) can, in rare instances, cause disease in recipients and susceptible contacts or evolve to become circulating vaccine-derived strains with the potential to cause outbreaks. Two novel type 2 OPV (nOPV2) c
Externí odkaz:
https://doaj.org/article/9baa83fb25b24bc98ad916e2a20f707d
Autor:
Darlene D. Wagner, Rachel L. Marine, Edward Ramos, Terry Fei Fan Ng, Christina J. Castro, Margaret Okomo-Adhiambo, Krysten Harvey, Gregory Doho, Reagan Kelly, Yatish Jain, Roman L. Tatusov, Hideky Silva, Paul A. Rota, Agha N. Khan, M. Steven Oberste
Publikováno v:
Microbiology Spectrum, Vol 10, Iss 2 (2022)
ABSTRACT Next-generation sequencing (NGS) is a powerful tool for detecting and investigating viral pathogens; however, analysis and management of the enormous amounts of data generated from these technologies remains a challenge. Here, we present VPi
Externí odkaz:
https://doaj.org/article/95bb69524aa844d5b6c039187d5fd75a
Autor:
Weldon, William C. *, Zhao, Kun, Jost, Heather A., Hetzler, Kimbell, Ciomperlik-Patton, Jessica, L. Konopka-Anstadt, Jennifer, Steven Oberste, M.
Publikováno v:
In Journal of Clinical Virology October 2020 131
Autor:
Sarah Kidd, Adriana S. Lopez, Jennifer L. Konopka-Anstadt, W. Allan Nix, Janell A. Routh, M. Steven Oberste
Publikováno v:
Emerging Infectious Diseases, Vol 26, Iss 10, Pp 6-12 (2020)
Acute flaccid myelitis (AFM) is a serious neurologic condition that causes limb weakness or paralysis in previously healthy children. Since clusters of cases were first reported in 2014, nationwide surveillance has demonstrated sharp increases in AFM
Externí odkaz:
https://doaj.org/article/6952ab6c989d43649b6e311e64723d12
Autor:
Rachel L. Marine, Nana Afia Asante Ntim, Christina J. Castro, Keren O. Attiku, Deborah Pratt, Ewurabena Duker, Esinam Agbosu, Terry Fei Fan Ng, Wangeci Gatei, Evangeline Obodai, John Kofi Odoom, Chastity L. Walker, Paul A. Rota, M. Steven Oberste, William Kwabena Ampofo, S. Arunmozhi Balajee
Publikováno v:
International Journal of Infectious Diseases, Vol 81, Iss , Pp 231-234 (2019)
Objective: To demonstrate the feasibility of applying next-generation sequencing (NGS) in medium-resource reference laboratories in Africa to enhance global disease surveillance. Methods: A training program was developed to support implementation of
Externí odkaz:
https://doaj.org/article/d2335ab2d4534deeb70217f664dc6335
Autor:
Christopher J. Harrison, William C. Weldon, Barbara A. Pahud, Mary Anne Jackson, M. Steven Oberste, Rangaraj Selvarangan
Publikováno v:
Emerging Infectious Diseases, Vol 25, Iss 3, Pp 585-588 (2019)
We evaluated enterovirus D68 seroprevalence in Kansas City, Missouri, USA, from samples obtained during 2012–2013. Neutralizing antibodies against Fermon and the dominant 2014 Missouri isolate were universally detected. Titers increased with age. W
Externí odkaz:
https://doaj.org/article/53079ef25fc44c2f957cee8efe8348bd