Zobrazeno 1 - 10
of 12
pro vyhledávání: '"Stephanie N. Afari"'
Autor:
Cory Abate-Shen, Andrea Califano, Michael M. Shen, Mark A. Rubin, Mariano J. Alvarez, Eva Corey, Luca Zanella, Timur Mukhammadov, Stephanie N. Afari, Jaime Y. Kim, Sergey Pampou, Ronald Realubit, Charles Karan, Chee Wai Chua, Antonina Mitrofanova, Simone de Brot, Antonio Rodriguez-Calero, Maho Shibata, Florencia Picech, Eugene F. Douglass, Min Zou, Francisca Nunes de Almeida, Juan Martín Arriaga, Alessandro Vasciaveo
Index of Supplementary Data
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::400192d080ba228dd2401397762ff34b
https://doi.org/10.1158/2159-8290.22541971.v1
https://doi.org/10.1158/2159-8290.22541971.v1
Autor:
Cory Abate-Shen, Andrea Califano, Michael M. Shen, Mark A. Rubin, Mariano J. Alvarez, Eva Corey, Luca Zanella, Timur Mukhammadov, Stephanie N. Afari, Jaime Y. Kim, Sergey Pampou, Ronald Realubit, Charles Karan, Chee Wai Chua, Antonina Mitrofanova, Simone de Brot, Antonio Rodriguez-Calero, Maho Shibata, Florencia Picech, Eugene F. Douglass, Min Zou, Francisca Nunes de Almeida, Juan Martín Arriaga, Alessandro Vasciaveo
Supplementary Table 3: Transcriptomic analyses of the human patient samples A. TCGA Interactome B. SU2C Interactome C. Protein activity TCGA D. Protein Activity SU2C
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::50152ab5715db26bd60d40e0922dd5e7
https://doi.org/10.1158/2159-8290.22541959
https://doi.org/10.1158/2159-8290.22541959
Autor:
Cory Abate-Shen, Andrea Califano, Michael M. Shen, Mark A. Rubin, Mariano J. Alvarez, Eva Corey, Luca Zanella, Timur Mukhammadov, Stephanie N. Afari, Jaime Y. Kim, Sergey Pampou, Ronald Realubit, Charles Karan, Chee Wai Chua, Antonina Mitrofanova, Simone de Brot, Antonio Rodriguez-Calero, Maho Shibata, Florencia Picech, Eugene F. Douglass, Min Zou, Francisca Nunes de Almeida, Juan Martín Arriaga, Alessandro Vasciaveo
Prioritizing treatments for individual patients with cancer remains challenging, and performing coclinical studies using patient-derived models in real time is often unfeasible. To circumvent these challenges, we introduce OncoLoop, a precision medic
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8b855720c962afe23f44290b02652b77
https://doi.org/10.1158/2159-8290.c.6549772
https://doi.org/10.1158/2159-8290.c.6549772
Autor:
Cory Abate-Shen, Andrea Califano, Michael M. Shen, Mark A. Rubin, Mariano J. Alvarez, Eva Corey, Luca Zanella, Timur Mukhammadov, Stephanie N. Afari, Jaime Y. Kim, Sergey Pampou, Ronald Realubit, Charles Karan, Chee Wai Chua, Antonina Mitrofanova, Simone de Brot, Antonio Rodriguez-Calero, Maho Shibata, Florencia Picech, Eugene F. Douglass, Min Zou, Francisca Nunes de Almeida, Juan Martín Arriaga, Alessandro Vasciaveo
Supplementary Table 4: OncoMatch A. OncoMatch TCGA B. OncoMatch SU2C
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4b970eb201f4bd82031e9c6c0b7a1dd3
https://doi.org/10.1158/2159-8290.22541956
https://doi.org/10.1158/2159-8290.22541956
Autor:
Cory Abate-Shen, Andrea Califano, Michael M. Shen, Mark A. Rubin, Mariano J. Alvarez, Eva Corey, Luca Zanella, Timur Mukhammadov, Stephanie N. Afari, Jaime Y. Kim, Sergey Pampou, Ronald Realubit, Charles Karan, Chee Wai Chua, Antonina Mitrofanova, Simone de Brot, Antonio Rodriguez-Calero, Maho Shibata, Florencia Picech, Eugene F. Douglass, Min Zou, Francisca Nunes de Almeida, Juan Martín Arriaga, Alessandro Vasciaveo
Detailed Materials and Methods
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9c4df22845dfdcb9a0c8be4fd4916ec0
https://doi.org/10.1158/2159-8290.22541974
https://doi.org/10.1158/2159-8290.22541974
Autor:
Cory Abate-Shen, Andrea Califano, Michael M. Shen, Mark A. Rubin, Mariano J. Alvarez, Eva Corey, Luca Zanella, Timur Mukhammadov, Stephanie N. Afari, Jaime Y. Kim, Sergey Pampou, Ronald Realubit, Charles Karan, Chee Wai Chua, Antonina Mitrofanova, Simone de Brot, Antonio Rodriguez-Calero, Maho Shibata, Florencia Picech, Eugene F. Douglass, Min Zou, Francisca Nunes de Almeida, Juan Martín Arriaga, Alessandro Vasciaveo
Supplementary Table 6. OncoLoop summary table
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9bd45e0872463ae29f800dc0ace7a058
https://doi.org/10.1158/2159-8290.22541950.v1
https://doi.org/10.1158/2159-8290.22541950.v1
Autor:
Cory Abate-Shen, Andrea Califano, Michael M. Shen, Mark A. Rubin, Mariano J. Alvarez, Eva Corey, Luca Zanella, Timur Mukhammadov, Stephanie N. Afari, Jaime Y. Kim, Sergey Pampou, Ronald Realubit, Charles Karan, Chee Wai Chua, Antonina Mitrofanova, Simone de Brot, Antonio Rodriguez-Calero, Maho Shibata, Florencia Picech, Eugene F. Douglass, Min Zou, Francisca Nunes de Almeida, Juan Martín Arriaga, Alessandro Vasciaveo
Supplementary Table 2: Transcriptomic analyses of the GEMMs A. GEMMs Interactome B. Protein activity C. Cluster analyses D. Pathway analyses
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3914d0e172e50b49300b1648583364fd
https://doi.org/10.1158/2159-8290.22541962
https://doi.org/10.1158/2159-8290.22541962
Autor:
Cory Abate-Shen, Andrea Califano, Michael M. Shen, Mark A. Rubin, Mariano J. Alvarez, Eva Corey, Luca Zanella, Timur Mukhammadov, Stephanie N. Afari, Jaime Y. Kim, Sergey Pampou, Ronald Realubit, Charles Karan, Chee Wai Chua, Antonina Mitrofanova, Simone de Brot, Antonio Rodriguez-Calero, Maho Shibata, Florencia Picech, Eugene F. Douglass, Min Zou, Francisca Nunes de Almeida, Juan Martín Arriaga, Alessandro Vasciaveo
Figure S1: Genomic alterations in prostate cancer represented in the GEMMs (related to Fig. 2). Figure S2: Additional phenotypic analyses of the GEMMs (related to Fig. 2). Figure S3: Phenotypic analysis of allograft and organoid models (related to Fi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dadb434fc053ed576194fbc4dad00257
https://doi.org/10.1158/2159-8290.22541968
https://doi.org/10.1158/2159-8290.22541968
Autor:
Cory Abate-Shen, Andrea Califano, Michael M. Shen, Mark A. Rubin, Mariano J. Alvarez, Eva Corey, Luca Zanella, Timur Mukhammadov, Stephanie N. Afari, Jaime Y. Kim, Sergey Pampou, Ronald Realubit, Charles Karan, Chee Wai Chua, Antonina Mitrofanova, Simone de Brot, Antonio Rodriguez-Calero, Maho Shibata, Florencia Picech, Eugene F. Douglass, Min Zou, Francisca Nunes de Almeida, Juan Martín Arriaga, Alessandro Vasciaveo
Supplementary Table 7. Transcriptomic analyses of the PDX models A. PDX interactome B. OncoTreat for drugs to PDX using DU145 cell perturbation data
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ccb78738fc4f399de8bf4ba405392048
https://doi.org/10.1158/2159-8290.22541947
https://doi.org/10.1158/2159-8290.22541947
Autor:
Cory Abate-Shen, Andrea Califano, Michael M. Shen, Mark A. Rubin, Mariano J. Alvarez, Eva Corey, Luca Zanella, Timur Mukhammadov, Stephanie N. Afari, Jaime Y. Kim, Sergey Pampou, Ronald Realubit, Charles Karan, Chee Wai Chua, Antonina Mitrofanova, Simone de Brot, Antonio Rodriguez-Calero, Maho Shibata, Florencia Picech, Eugene F. Douglass, Min Zou, Francisca Nunes de Almeida, Juan Martín Arriaga, Alessandro Vasciaveo
Supplementary Table 5. Drug perturbation and OncoTreat analysis A. Summary of drugs and concentrations used B. Drug perturbation data for DU145 C. OncoTreat for drugs to SU2C patients using DU145 D. OncoTreat for drugs to GEMMs using DU145
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::98d63170eb883ef61e4bc42d1ecb5455
https://doi.org/10.1158/2159-8290.22541953.v1
https://doi.org/10.1158/2159-8290.22541953.v1