Zobrazeno 1 - 10 of 39 pro vyhledávání: '"Stefano M, Marino"'
3
A computational strategy for rapid on-site 16S metabarcoding with Oxford Nanopore sequencing
Autor: Stefano M. Marino
The investigation of microbial communities through nucleotide sequencing has become an essential asset in environmental science, not only for research oriented activities but also for on-site monitoring; one technology, in particular, holds great pro
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::af7727e6a08371bfab95cd7991332a2e
https://doi.org/10.1101/2020.08.25.267591
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4
Akademický článek
A structure-based approach for detection of thiol oxidoreductases and their catalytic redox-active cysteine residues.
Autor: Stefano M Marino, Vadim N Gladyshev
Publikováno v: PLoS Computational Biology, Vol 5, Iss 5, p e1000383 (2009)
Cysteine (Cys) residues often play critical roles in proteins, for example, in the formation of structural disulfide bonds, metal binding, targeting proteins to the membranes, and various catalytic functions. However, the structural determinants for
Externí odkaz: https://doaj.org/article/b6872508965b4d2eb9004616813c7b97
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6
Cy-preds: An algorithm and a web service for the analysis and prediction of cysteine reactivity
Autor: İnanç Soylu, Stefano M. Marino
Publikováno v: Proteins: Structure, Function, and Bioinformatics. 84:278-291
Cysteine (Cys) is a critically important amino acid, serving a variety of functions within proteins including structural roles, catalysis, and regulation of function through post-translational modifications. Predicting which Cys residues are likely t
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::91b481a3662decc63651be62957dde01
https://doi.org/10.1002/prot.24978
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7
Protein Flexibility and Cysteine Reactivity: Influence of Mobility on the H-Bond Network and Effects on pKa Prediction
Autor: Stefano M. Marino
Publikováno v: The Protein Journal. 33:323-336
Thanks to its chemical plasticity, cysteine (Cys) is a very versatile player in proteins. A major determinant of Cys reactivity is pKa: the ability to predict it is deemed critical in redox bioinformatics. I considered different computational methods
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::773b13371b5be1bd13682e98a64bc809
https://doi.org/10.1007/s10930-014-9564-z
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8
Cloning and characterization of cytoplasmic carbonic anhydrase from gills of four Antarctic fish: insights into the evolution of fish carbonic anhydrase and cold adaptation
Autor: Luigi Bubacco, Gianfranco Santovito, Mariano Beltramini, Rekha Cappellini, Stefano M. Marino, Giovanna Sattin
Publikováno v: Polar Biology. 35:1587-1600
Although carbonic anhydrase is a ubiquitous enzyme involved in a variety of physiological processes, the information on its evolution and cold adaptation among Antarctic fish is still limited: the only Antarctic fish carbonic anhydrase characterized
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::d2e1bfcc7774f20a74072d7e93d18d35
https://doi.org/10.1007/s00300-012-1200-9
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9
Cpipe: a comprehensive computational platform for sequence and structure-based analyses of Cysteine residues
Autor: İnanç Soylu, Stefano M. Marino
Publikováno v: Bioinformatics. 33:2395-2396
Summary Due to their chemical plasticity, Cysteine residues (Cys) can serve many different functions. Identification and classification of reactive Cys isn't a trivial job: currently, no available tool exists for an all-round, comprehensive (inclusiv
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d5e568fa362c9ae4af014313e4700d42
https://doi.org/10.1093/bioinformatics/btx181
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10
Redox Biology: Computational Approaches to the Investigation of Functional Cysteine Residues
Autor: Stefano M. Marino, Vadim N. Gladyshev
Publikováno v: Antioxidants & Redox Signaling. 15:135-146
Cysteine (Cys) residues serve many functions, such as catalysis, stabilization of protein structure through disulfides, metal binding, and regulation of protein function. Cys residues are also subject to numerous post-translational modifications. In
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4d5300295438f1731d755e11da0f6704
https://doi.org/10.1089/ars.2010.3561
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