Zobrazeno 1 - 10
of 28
pro vyhledávání: '"Srinivas C. Turaga"'
Autor:
Yongsoo Kim, Kannan Umadevi Venkataraju, Kith Pradhan, Carolin Mende, Julian Taranda, Srinivas C. Turaga, Ignacio Arganda-Carreras, Lydia Ng, Michael J. Hawrylycz, Kathleen S. Rockland, H. Sebastian Seung, Pavel Osten
Publikováno v:
Cell Reports, Vol 10, Iss 2, Pp 292-305 (2015)
Understanding how brain activation mediates behaviors is a central goal of systems neuroscience. Here, we apply an automated method for mapping brain activation in the mouse in order to probe how sex-specific social behaviors are represented in the m
Externí odkaz:
https://doaj.org/article/e15a24dd4c3845a48bc6eb3699873621
Autor:
Janne K. Lappalainen, Fabian D. Tschopp, Sridhama Prakhya, Mason McGill, Aljoscha Nern, Kazunori Shinomiya, Shin-ya Takemura, Eyal Gruntman, Jakob H. Macke, Srinivas C. Turaga
We can now measure the connectivity of every neuron in a neural circuit, but we are still blind to other biological details, including the dynamical characteristics of each neuron. The degree to which connectivity measurements alone can inform unders
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::9bec2c9ebfc3936cac1dd01d255dca6b
https://doi.org/10.1101/2023.03.11.532232
https://doi.org/10.1101/2023.03.11.532232
Autor:
Philipp Berens, Jeremy Freeman, Thomas Deneux, Nikolay Chenkov, Thomas McColgan, Artur Speiser, Jakob H Macke, Srinivas C Turaga, Patrick Mineault, Peter Rupprecht, Stephan Gerhard, Rainer W Friedrich, Johannes Friedrich, Liam Paninski, Marius Pachitariu, Kenneth D Harris, Ben Bolte, Timothy A Machado, Dario Ringach, Jasmine Stone, Luke E Rogerson, Nicolas J Sofroniew, Jacob Reimer, Emmanouil Froudarakis, Thomas Euler, Miroslav Román Rosón, Lucas Theis, Andreas S Tolias, Matthias Bethge
Publikováno v:
PLoS Computational Biology, Vol 14, Iss 5, p e1006157 (2018)
In recent years, two-photon calcium imaging has become a standard tool to probe the function of neural circuits and to study computations in neuronal populations. However, the acquired signal is only an indirect measurement of neural activity due to
Externí odkaz:
https://doaj.org/article/358eea9214b64f3889ddd1a4b6f1cd9d
Autor:
Tri Nguyen, Jan Funke, Stephan Gerhard, Rachel Wilson, Tom Kazimiers, Philipp Schlegel, Wei-Chung Allen Lee, Renate Krause, Larissa Heinrich, Davi D. Bock, Caroline Malin-Mayor, Srinivas C. Turaga, Arlo Sheridan, Gregory S.X.E. Jefferis, Julia Buhmann, Stephan Saalfeld, Matthew Cook
Publikováno v:
Nature Methods. 18:771-774
We develop an automatic method for synaptic partner identification in insect brains and use it to predict synaptic partners in a whole-brain electron microscopy dataset of the fruit fly. The predictions can be used to infer a connectivity graph with
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::0b7b1012ae8d1ba36bf9711a7cfdc41e
https://doi.org/10.1038/s41592-021-01183-7
https://doi.org/10.1038/s41592-021-01183-7
Autor:
Srinivas C. Turaga, Ashok Litwin-Kumar
Publikováno v:
Current Opinion in Neurobiology. 58:94-100
Numerous efforts to generate "connectomes," or synaptic wiring diagrams, of large neural circuits or entire nervous systems are currently underway. These efforts promise an abundance of data to guide theoretical models of neural computation and test
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::86159f88051e4e86c00c02d57c21e044
https://doi.org/10.1016/j.conb.2019.07.007
https://doi.org/10.1016/j.conb.2019.07.007
Autor:
David L. Stern, Sosale M, Khalif F, Yu Ding, Eunjoon Kim, Waddell P, Srinivas C. Turaga, Ben J. Arthur
Many animals produce distinct sounds or substrate-borne vibrations, but these signals have proved challenging to segment with automated algorithms. We have developed SongExplorer, a web-browser based interface wrapped around a deep-learning algorithm
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::76c3709f4a2217f488ea0028dff875ef
https://doi.org/10.1101/2021.03.26.437280
https://doi.org/10.1101/2021.03.26.437280
Autor:
Richard Schalek, Srinivas C. Turaga, Jeff W. Lichtman, Hao Wang, Yaron Meirovitch, Lu Mi, Nir Shavit, Aravinthan D. T. Samuel
Publikováno v:
Medical Image Computing and Computer Assisted Intervention – MICCAI 2020 ISBN: 9783030597214
Single-beam scanning electron microscopes (SEM) are widely used to acquire massive data sets for biomedical study, material analysis, and fabrication inspection. Datasets are typically acquired with uniform acquisition: applying the electron beam wit
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::85253c84f0ca7a0e4c4fa39a7dd8032a
https://doi.org/10.1007/978-3-030-59722-1_8
https://doi.org/10.1007/978-3-030-59722-1_8
Autor:
Stephan Saalfeld, Philipp Schlegel, Rachel Wilson, Wei-Chung Allen Lee, Julia Buhmann, Larissa Heinrich, Stephan Gerhard, Tri Nguyen, Davi D. Bock, Srinivas C. Turaga, Jan Funke, Matthew Cook, Arlo Sheridan, Gregory S.X.E. Jefferis, Renate Krause
The study of neural circuits requires the reconstruction of neurons and the identification of synaptic connections between them. To scale the reconstruction to the size of whole-brain datasets, semi-automatic methods are needed to solve those tasks.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6dfd2acbd2e311495b0a81478855aa22
Autor:
Srinivas C. Turaga, Lucas-Raphael Müller, Jakob H. Macke, Philipp Hoess, Christopher J. Obara, Wesley R. Legant, Ulf Matti, Anna Kreshuk, Artur Speiser, Jonas Ries
Publikováno v:
Nature Methods
In the version of this Article initially published, Jacob H. Macke and Jonas Ries were not listed as corresponding authors. Their contact information and designation as corresponding authors are now included. The error has been corrected in the onlin
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::581a20d0f2ebe86200c542594d4fa0d3
https://doi.org/10.1038/s41592-021-01305-1
https://doi.org/10.1038/s41592-021-01305-1
Autor:
Hui Yang, Srinivas C. Turaga, Shengjin Xu, Fredrick E. Henry, Lihua Wang, Andrew L. Lemire, Scott M. Sternson, Vilas Menon
Publikováno v:
Science. 370:eabb2494
Brains encode behaviors using neurons amenable to systematic classification by gene expression. The contribution of molecular identity to neural coding is not understood because of the challenges involved with measuring neural dynamics and molecular
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::49610c91f574cc0bd8689112fe6611e2
https://doi.org/10.1126/science.abb2494
https://doi.org/10.1126/science.abb2494