Zobrazeno 1 - 10
of 241
pro vyhledávání: '"Spouge John L"'
Autor:
Tewari Susanta, Spouge John L
Publikováno v:
BMC Bioinformatics, Vol 13, Iss 1, p 257 (2012)
Abstract Background Currently, there is no open-source, cross-platform and scalable framework for coalescent analysis in population genetics. There is no scalable GUI based user application either. Such a framework and application would not only driv
Externí odkaz:
https://doaj.org/article/91ca162c79584c7cb41b685c7d40ae46
Publikováno v:
BMC Research Notes, Vol 5, Iss 1, p 286 (2012)
Abstract Background Local alignment programs often calculate the probability that a match occurred by chance. The calculation of this probability may require a “finite-size” correction to the lengths of the sequences, as an alignment that starts
Externí odkaz:
https://doaj.org/article/80d59b1dd9954b3b952ed28667f2bb8e
Publikováno v:
BMC Bioinformatics, Vol 9, Iss 1, p 262 (2008)
Abstract Background Biologically active sequence motifs often have positional preferences with respect to a genomic landmark. For example, many known transcription factor binding sites (TFBSs) occur within an interval [-300, 0] bases upstream of a tr
Externí odkaz:
https://doaj.org/article/92404dee296f4f9e95b294f7d7d155e1
Autor:
Landsman David, Sheetlin Sergey L, Mariño-Ramírez Leonardo, Tharakaraman Kannan, Spouge John L
Publikováno v:
BMC Bioinformatics, Vol 7, Iss 1, p 408 (2006)
Abstract Background Many DNA regulatory elements occur as multiple instances within a target promoter. Gibbs sampling programs for finding DNA regulatory elements de novo can be prohibitively slow in locating all instances of such an element in a seq
Externí odkaz:
https://doaj.org/article/4d3b16a94d654f27902178c6f6cddcb6
Akademický článek
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Autor:
Tagawa, Takanobu, Gao, Shaojian, Koparde, Vishal N., Gonzalez, Mileidy, Spouge, John L., Serquiña, Anna P., Lurain, Kathryn, Ramaswami, Ramya, Uldrick, Thomas S., Yarchoan, Robert, Ziegelbauer, Joseph M.
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America, 2018 Dec 01. 115(50), 12805-12810.
Externí odkaz:
https://www.jstor.org/stable/26580163
Publikováno v:
Annals of Statistics 2009, Vol. 37, No. 6A, 3697-3714
The gapped local alignment score of two random sequences follows a Gumbel distribution. If computers could estimate the parameters of the Gumbel distribution within one second, the use of arbitrary alignment scoring schemes could increase the sensiti
Externí odkaz:
http://arxiv.org/abs/0909.0645
Autor:
Gauran, Iris Ivy M., Park, Junyong, Lim, Johan, Park, DoHwan, Zylstra, John, Peterson, Thomas, Kann, Maricel, Spouge, John L.
Publikováno v:
Biometrics, 2018 Jun 01. 74(2), 458-471.
Externí odkaz:
https://www.jstor.org/stable/45092887
Autor:
Spouge, John L.
Publikováno v:
Journal of Applied Probability, 2004 Dec 01. 41(4), 975-983.
Externí odkaz:
https://www.jstor.org/stable/4141371